RNA–Protein interactions for RNA: ENST00000621573.1

TARDBP-224, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-224	ENST00000621573	FAM163A	Q96GL9	167 aa	Predicted RBP	13.88	□□□□□ -0.19
TARDBP-224	ENST00000621573	BCAN	Q96GW7	911 aa		13.88	□□□□□ -0.19
TARDBP-224	ENST00000621573	DNMBP	Q6XZF7	1577 aa		13.88	□□□□□ -0.19
TARDBP-224	ENST00000621573	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.87	□□□□□ -0.19
TARDBP-224	ENST00000621573	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.84	□□□□□ -0.19
TARDBP-224	ENST00000621573	CUX1	P39880	1505 aa		13.84	□□□□□ -0.19
TARDBP-224	ENST00000621573	WRN	Q14191	1432 aa	Predicted RBP eCLIP	13.83	□□□□□ -0.2
TARDBP-224	ENST00000621573	IFT140	Q96RY7	1462 aa		13.82	□□□□□ -0.2
TARDBP-224	ENST00000621573	LCE2D	Q5TA82	110 aa	Predicted RBP	13.82	□□□□□ -0.2
TARDBP-224	ENST00000621573	TESPA1	A2RU30	521 aa	Predicted RBP	13.81	□□□□□ -0.2
TARDBP-224	ENST00000621573	PTGER2	P43116	358 aa		13.81	□□□□□ -0.2
TARDBP-224	ENST00000621573	SOGA1	O94964	1423 aa		13.81	□□□□□ -0.2
TARDBP-224	ENST00000621573	POLA1	P09884	1462 aa	Predicted RBP	13.8	□□□□□ -0.2
TARDBP-224	ENST00000621573	MLLT3	P42568	568 aa	Predicted RBP	13.8	□□□□□ -0.2
TARDBP-224	ENST00000621573	FGD5	Q6ZNL6	1462 aa		13.8	□□□□□ -0.2
TARDBP-224	ENST00000621573	DDX12P	Q92771	950 aa		13.78	□□□□□ -0.2
TARDBP-224	ENST00000621573	LHX6	Q9UPM6	363 aa		13.78	□□□□□ -0.2
TARDBP-224	ENST00000621573	RAD54L2	Q9Y4B4	1467 aa		13.78	□□□□□ -0.2
TARDBP-224	ENST00000621573	MARVELD3	Q96A59	401 aa		13.77	□□□□□ -0.21
TARDBP-224	ENST00000621573	GRXCR2	A6NFK2	248 aa		13.76	□□□□□ -0.21
TARDBP-224	ENST00000621573	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.74	□□□□□ -0.21
TARDBP-224	ENST00000621573	TDRD9	Q8NDG6	1382 aa	Known RBP	13.73	□□□□□ -0.21
TARDBP-224	ENST00000621573	EMP3	P54852	163 aa		13.73	□□□□□ -0.21
TARDBP-224	ENST00000621573	SYNJ1	O43426	1573 aa		13.72	□□□□□ -0.21
TARDBP-224	ENST00000621573	JPH4	Q96JJ6	628 aa		13.72	□□□□□ -0.21
TARDBP-224	ENST00000621573	PCDHGA10	Q9Y5H3	936 aa		13.72	□□□□□ -0.21
TARDBP-224	ENST00000621573	PHF14	O94880	888 aa		13.71	□□□□□ -0.21
TARDBP-224	ENST00000621573	FOSB	P53539	338 aa		13.71	□□□□□ -0.21
TARDBP-224	ENST00000621573	AQR	O60306	1485 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
TARDBP-224	ENST00000621573	TOP2B	Q02880	1626 aa		13.71	□□□□□ -0.22
TARDBP-224	ENST00000621573	SMYD5	Q6GMV2	418 aa		13.7	□□□□□ -0.22
TARDBP-224	ENST00000621573	ZNF454	Q8N9F8	522 aa		13.7	□□□□□ -0.22
TARDBP-224	ENST00000621573	ERBB3	P21860	1342 aa		13.69	□□□□□ -0.22
TARDBP-224	ENST00000621573	TARBP1	Q13395	1621 aa	Known RBP	13.69	□□□□□ -0.22
TARDBP-224	ENST00000621573	OSBP	P22059	807 aa		13.69	□□□□□ -0.22
TARDBP-224	ENST00000621573	BIVM-ERCC5	R4GMW8	1640 aa		13.68	□□□□□ -0.22
TARDBP-224	ENST00000621573	PSD	A5PKW4	1024 aa	Predicted RBP	13.67	□□□□□ -0.22
TARDBP-224	ENST00000621573	EPAS1	Q99814	870 aa		13.67	□□□□□ -0.22
TARDBP-224	ENST00000621573	FAM205C	A6NFA0	338 aa		13.66	□□□□□ -0.22
TARDBP-224	ENST00000621573	PRIM1	P49642	420 aa	Known RBP	13.66	□□□□□ -0.22
TARDBP-224	ENST00000621573	VARS2	Q5ST30	1063 aa	Known RBP	13.66	□□□□□ -0.22
TARDBP-224	ENST00000621573	TYW1B	Q6NUM6	668 aa		13.66	□□□□□ -0.22
TARDBP-224	ENST00000621573	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
TARDBP-224	ENST00000621573	TULP1	O00294	542 aa	Predicted RBP	13.65	□□□□□ -0.22
TARDBP-224	ENST00000621573	ABCA10	Q8WWZ4	1543 aa		13.64	□□□□□ -0.23
TARDBP-224	ENST00000621573	PPP4R3B	Q5MIZ7	849 aa		13.64	□□□□□ -0.23
TARDBP-224	ENST00000621573	FBXW7	Q969H0	707 aa		13.64	□□□□□ -0.23
TARDBP-224	ENST00000621573	ZDHHC16	Q969W1	377 aa		13.64	□□□□□ -0.23
TARDBP-224	ENST00000621573	POTEB3	A0JP26	581 aa		13.63	□□□□□ -0.23
TARDBP-224	ENST00000621573	RBM26	Q5T8P6	1007 aa	Known RBP	13.63	□□□□□ -0.23
TARDBP-224	ENST00000621573	POTEB	Q6S5H4	581 aa		13.63	□□□□□ -0.23
TARDBP-224	ENST00000621573	EIF4G3	O43432	1585 aa	Known RBP	13.62	□□□□□ -0.23
TARDBP-224	ENST00000621573	GAPVD1	Q14C86	1478 aa		13.61	□□□□□ -0.23
TARDBP-224	ENST00000621573	EN1	Q05925	392 aa	Predicted RBP	13.61	□□□□□ -0.23
TARDBP-224	ENST00000621573	RBM33	Q96EV2	1170 aa	Known RBP	13.61	□□□□□ -0.23
TARDBP-224	ENST00000621573	HS3ST6	Q96QI5	342 aa		13.61	□□□□□ -0.23
TARDBP-224	ENST00000621573	ADAM33	Q9BZ11	813 aa		13.61	□□□□□ -0.23
TARDBP-224	ENST00000621573	LMOD2	Q6P5Q4	547 aa		13.6	□□□□□ -0.23
TARDBP-224	ENST00000621573	GRIN2B	Q13224	1484 aa		13.6	□□□□□ -0.23
TARDBP-224	ENST00000621573	MAP3K7	O43318	606 aa		13.58	□□□□□ -0.24
TARDBP-224	ENST00000621573	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.58	□□□□□ -0.24
TARDBP-224	ENST00000621573	WDR97	A6NE52	1622 aa		13.57	□□□□□ -0.24
TARDBP-224	ENST00000621573	BCL2L12	Q9HB09	334 aa		13.57	□□□□□ -0.24
TARDBP-224	ENST00000621573	SNAPC4	Q5SXM2	1469 aa		13.56	□□□□□ -0.24
TARDBP-224	ENST00000621573	TSR1	Q2NL82	804 aa	Known RBP	13.55	□□□□□ -0.24
TARDBP-224	ENST00000621573	ZNF687	Q8N1G0	1237 aa		13.55	□□□□□ -0.24
TARDBP-224	ENST00000621573	KIF27	Q86VH2	1401 aa		13.55	□□□□□ -0.24
TARDBP-224	ENST00000621573	C6orf132	Q5T0Z8	1188 aa		13.54	□□□□□ -0.24
TARDBP-224	ENST00000621573	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.53	□□□□□ -0.24
TARDBP-224	ENST00000621573	ABCA5	Q8WWZ7	1642 aa		13.53	□□□□□ -0.24
TARDBP-224	ENST00000621573	NUTM2F	A1L443	756 aa		13.52	□□□□□ -0.25
TARDBP-224	ENST00000621573	POTEG	Q6S5H5	508 aa		13.52	□□□□□ -0.25
TARDBP-224	ENST00000621573	POTEE	Q6S8J3	1075 aa		13.52	□□□□□ -0.25
TARDBP-224	ENST00000621573	CDHR5	Q9HBB8	845 aa		13.52	□□□□□ -0.25
TARDBP-224	ENST00000621573	POTEM	A6NI47	508 aa		13.5	□□□□□ -0.25
TARDBP-224	ENST00000621573	PTPRE	P23469	700 aa		13.5	□□□□□ -0.25
TARDBP-224	ENST00000621573	GPIHBP1	Q8IV16	184 aa		13.5	□□□□□ -0.25
TARDBP-224	ENST00000621573	KCNK17	Q96T54	332 aa		13.49	□□□□□ -0.25
TARDBP-224	ENST00000621573	SYNJ2	O15056	1496 aa		13.48	□□□□□ -0.25
TARDBP-224	ENST00000621573	IGF1R	P08069	1367 aa		13.48	□□□□□ -0.25
TARDBP-224	ENST00000621573	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.48	□□□□□ -0.25
TARDBP-224	ENST00000621573	AXIN2	Q9Y2T1	843 aa		13.48	□□□□□ -0.25
TARDBP-224	ENST00000621573	FHAD1	B1AJZ9	1412 aa		13.47	□□□□□ -0.25
TARDBP-224	ENST00000621573	ERICH3	Q5RHP9	1530 aa		13.47	□□□□□ -0.25
TARDBP-224	ENST00000621573	PBRM1	Q86U86	1689 aa		13.47	□□□□□ -0.25
TARDBP-224	ENST00000621573	ARHGAP33	O14559	1287 aa		13.46	□□□□□ -0.25
TARDBP-224	ENST00000621573	GPR37	O15354	613 aa		13.46	□□□□□ -0.25
TARDBP-224	ENST00000621573	COL9A1	P20849	921 aa		13.46	□□□□□ -0.25
TARDBP-224	ENST00000621573	PSEN2	P49810	448 aa		13.46	□□□□□ -0.25
TARDBP-224	ENST00000621573	PTGDR	Q13258	359 aa		13.46	□□□□□ -0.25
TARDBP-224	ENST00000621573	PBX2	P40425	430 aa		13.45	□□□□□ -0.26
TARDBP-224	ENST00000621573	ZC3H15	Q8WU90	426 aa	Known RBP	13.44	□□□□□ -0.26
TARDBP-224	ENST00000621573	PPP1R3G	B7ZBB8	358 aa		13.43	□□□□□ -0.26
TARDBP-224	ENST00000621573	FCHSD2	O94868	740 aa		13.43	□□□□□ -0.26
TARDBP-224	ENST00000621573	KCNH8	Q96L42	1107 aa		13.43	□□□□□ -0.26
TARDBP-224	ENST00000621573	RUSC2	Q8N2Y8	1516 aa		13.43	□□□□□ -0.26
TARDBP-224	ENST00000621573	CARMIL1	Q5VZK9	1371 aa		13.43	□□□□□ -0.26
TARDBP-224	ENST00000621573	CHD1	O14646	1710 aa		13.42	□□□□□ -0.26
TARDBP-224	ENST00000621573	ADAMTS12	P58397	1594 aa		13.41	□□□□□ -0.26
TARDBP-224	ENST00000621573	DMRTA1	Q5VZB9	504 aa		13.41	□□□□□ -0.26

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