RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PLPPR3Q6T4P5 718 aa28.03■■■□□ 2.08
CIRBP-245ENST00000621399 FER1L4A9Z1Z3 1794 aa28.03■■■□□ 2.08
CIRBP-245ENST00000621399 RIMS1Q86UR5 1692 aaKnown RBP28.03■■■□□ 2.08
CIRBP-245ENST00000621399 CNTLNQ9NXG0 1405 aa28.01■■■□□ 2.08
CIRBP-245ENST00000621399 WASHC2CQ9Y4E1 1318 aa28.01■■■□□ 2.07
CIRBP-245ENST00000621399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28■■■□□ 2.071e-19■□□□□ 10
CIRBP-245ENST00000621399 RNF17Q9BXT8 1623 aaKnown RBP27.98■■■□□ 2.07
CIRBP-245ENST00000621399 CEBPAP49715 358 aaPredicted RBP27.97■■■□□ 2.07
CIRBP-245ENST00000621399 NAIPQ13075 1403 aa27.94■■■□□ 2.06
CIRBP-245ENST00000621399 ZMYM3Q14202 1370 aa27.94■■■□□ 2.06
CIRBP-245ENST00000621399 ILDR1Q86SU0 546 aaPredicted RBP27.93■■■□□ 2.06
CIRBP-245ENST00000621399 KANK1Q14678 1352 aa27.93■■■□□ 2.06
CIRBP-245ENST00000621399 HFM1A2PYH4 1435 aa27.92■■■□□ 2.06
CIRBP-245ENST00000621399 KDM5DQ9BY66 1539 aa27.92■■■□□ 2.06
CIRBP-245ENST00000621399 CLTCQ00610 1675 aaKnown RBP27.92■■■□□ 2.06
CIRBP-245ENST00000621399 MROH1Q8NDA8 1641 aa27.92■■■□□ 2.06
CIRBP-245ENST00000621399 FAM135AQ9P2D6 1515 aa27.91■■■□□ 2.06
CIRBP-245ENST00000621399 PRDM15P57071 1507 aaPredicted RBP27.89■■■□□ 2.06
CIRBP-245ENST00000621399 DEPDC5O75140 1603 aa27.89■■■□□ 2.05
CIRBP-245ENST00000621399 ABCC3O15438 1527 aa27.87■■■□□ 2.05
CIRBP-245ENST00000621399 MROH2AA6NES4 1674 aa27.86■■■□□ 2.05
CIRBP-245ENST00000621399 C3P01024 1663 aa27.84■■■□□ 2.05
CIRBP-245ENST00000621399 GCC2Q8IWJ2 1684 aa27.84■■■□□ 2.05
CIRBP-245ENST00000621399 ZC3H13Q5T200 1668 aaKnown RBP27.81■■■□□ 2.04
CIRBP-245ENST00000621399 NUP155O75694 1391 aa27.81■■■□□ 2.04
CIRBP-245ENST00000621399 UNC13BO14795 1591 aa27.8■■■□□ 2.04
CIRBP-245ENST00000621399 VWDEQ8N2E2 1590 aa27.8■■■□□ 2.04
CIRBP-245ENST00000621399 FBXO31Q5XUX0 539 aaPredicted RBP27.79■■■□□ 2.04
CIRBP-245ENST00000621399 PZPP20742 1482 aa27.77■■■□□ 2.04
CIRBP-245ENST00000621399 TRIM52Q96A61 297 aa27.77■■■□□ 2.04
CIRBP-245ENST00000621399 CEP152O94986 1710 aa27.77■■■□□ 2.04
CIRBP-245ENST00000621399 LMTK2Q8IWU2 1503 aa27.77■■■□□ 2.04
CIRBP-245ENST00000621399 NPATQ14207 1427 aa27.76■■■□□ 2.04
CIRBP-245ENST00000621399 SETD5Q9C0A6 1442 aa27.76■■■□□ 2.04
CIRBP-245ENST00000621399 CAMSAP1Q5T5Y3 1602 aa27.74■■■□□ 2.03
CIRBP-245ENST00000621399 TRIM26Q12899 539 aaPredicted RBP27.73■■■□□ 2.03
CIRBP-245ENST00000621399 ARHGAP31Q2M1Z3 1444 aa27.73■■■□□ 2.03
CIRBP-245ENST00000621399 IQGAP3Q86VI3 1631 aa27.69■■■□□ 2.02
CIRBP-245ENST00000621399 TNRQ92752 1358 aa27.69■■■□□ 2.02
CIRBP-245ENST00000621399 EFCAB6Q5THR3 1501 aa27.67■■■□□ 2.02
CIRBP-245ENST00000621399 RAB3GAP2Q9H2M9 1393 aa27.67■■■□□ 2.02
CIRBP-245ENST00000621399 UHRF1BP1Q6BDS2 1440 aa27.67■■■□□ 2.02
CIRBP-245ENST00000621399 ACIN1Q9UKV3 1341 aaKnown RBP27.67■■■□□ 2.02
CIRBP-245ENST00000621399 ERVK-7P63135 1459 aa27.65■■■□□ 2.02
CIRBP-245ENST00000621399 TET3O43151 1660 aa27.65■■■□□ 2.02
CIRBP-245ENST00000621399 SETD1BQ9UPS6 1966 aaKnown RBP27.63■■■□□ 2.01
CIRBP-245ENST00000621399 LMTK3Q96Q04 1460 aa27.63■■■□□ 2.01
CIRBP-245ENST00000621399 SLC4A1APQ9BWU0 796 aaKnown RBP27.62■■■□□ 2.01
CIRBP-245ENST00000621399 PREX1Q8TCU6 1659 aa27.62■■■□□ 2.01
CIRBP-245ENST00000621399 SPATA31D1Q6ZQQ2 1576 aa27.61■■■□□ 2.01
CIRBP-245ENST00000621399 RPRD2Q5VT52 1461 aaKnown RBP27.61■■■□□ 2.01
CIRBP-245ENST00000621399 HRCP23327 699 aa27.59■■■□□ 2.01
CIRBP-245ENST00000621399 HSPA2P54652 639 aa27.58■■■□□ 2.01
CIRBP-245ENST00000621399 PKD2Q13563 968 aa27.57■■■□□ 2
CIRBP-245ENST00000621399 NOS1P29475 1434 aa27.56■■■□□ 2
CIRBP-245ENST00000621399 MYO3AQ8NEV4 1616 aa27.56■■■□□ 2
CIRBP-245ENST00000621399 CFAP65Q6ZU64 1925 aaKnown RBP27.55■■■□□ 2
CIRBP-245ENST00000621399 MPHOSPH9Q99550 1183 aa27.55■■■□□ 2
CIRBP-245ENST00000621399 NLRP1Q9C000 1473 aa27.55■■■□□ 2
CIRBP-245ENST00000621399 E9PCH4 1651 aa27.54■■■□□ 2
CIRBP-245ENST00000621399 A2ML1A8K2U0 1454 aa27.52■■■□□ 2
CIRBP-245ENST00000621399 CEP170BQ9Y4F5 1589 aaPredicted RBP27.51■■□□□ 1.99
CIRBP-245ENST00000621399 SLC52A1Q9NWF4 448 aa27.5■■□□□ 1.99
CIRBP-245ENST00000621399 IDI1Q13907 227 aa27.49■■□□□ 1.99
CIRBP-245ENST00000621399 SYNMO15061 1565 aa27.48■■□□□ 1.99
CIRBP-245ENST00000621399 FOXD1Q16676 465 aa27.47■■□□□ 1.99
CIRBP-245ENST00000621399 THEMISQ8N1K5 641 aaPredicted RBP27.46■■□□□ 1.99
CIRBP-245ENST00000621399 STAG3Q9UJ98 1225 aa27.46■■□□□ 1.99
CIRBP-245ENST00000621399 ZNF142P52746 1687 aaPredicted RBP27.46■■□□□ 1.99
CIRBP-245ENST00000621399 PTPRTO14522 1441 aa27.45■■□□□ 1.98
CIRBP-245ENST00000621399 UGGT1Q9NYU2 1555 aa27.44■■□□□ 1.98
CIRBP-245ENST00000621399 PCGF6Q9BYE7 350 aa27.39■■□□□ 1.98
CIRBP-245ENST00000621399 CHGAP10645 457 aaKnown RBP27.38■■□□□ 1.97
CIRBP-245ENST00000621399 PLA2R1Q13018 1463 aa27.38■■□□□ 1.97
CIRBP-245ENST00000621399 PIK3C2BO00750 1634 aa27.38■■□□□ 1.97
CIRBP-245ENST00000621399 SPHKAPQ2M3C7 1700 aa27.37■■□□□ 1.97
CIRBP-245ENST00000621399 TRPM2O94759 1503 aa27.36■■□□□ 1.97
CIRBP-245ENST00000621399 NCKAP5LQ9HCH0 1330 aa27.34■■□□□ 1.97
CIRBP-245ENST00000621399 UBR1Q8IWV7 1749 aa27.33■■□□□ 1.97
CIRBP-245ENST00000621399 FBXO41Q8TF61 875 aa27.33■■□□□ 1.97
CIRBP-245ENST00000621399 ADGRB3O60242 1522 aa27.32■■□□□ 1.96
CIRBP-245ENST00000621399 ANKLE2Q86XL3 938 aa27.32■■□□□ 1.96
CIRBP-245ENST00000621399 DMRT2Q9Y5R5 561 aa27.29■■□□□ 1.96
CIRBP-245ENST00000621399 TMEM2Q9UHN6 1383 aa27.29■■□□□ 1.96
CIRBP-245ENST00000621399 KDM5AP29375 1690 aaKnown RBP27.27■■□□□ 1.96
CIRBP-245ENST00000621399 CLTCL1P53675 1640 aa27.27■■□□□ 1.96
CIRBP-245ENST00000621399 CCDC144AA2RUR9 1427 aa27.27■■□□□ 1.96
CIRBP-245ENST00000621399 EID1Q9Y6B2 187 aa27.27■■□□□ 1.96
CIRBP-245ENST00000621399 TXNDC2Q86VQ3 553 aa27.26■■□□□ 1.95
CIRBP-245ENST00000621399 TMEM131LA2VDJ0 1609 aa27.26■■□□□ 1.95
CIRBP-245ENST00000621399 SLIT1O75093 1534 aa27.25■■□□□ 1.95
CIRBP-245ENST00000621399 ARHGAP23Q9P227 1491 aa27.25■■□□□ 1.95
CIRBP-245ENST00000621399 STRCQ7RTU9 1775 aa27.25■■□□□ 1.95
CIRBP-245ENST00000621399 ZNF326Q5BKZ1 582 aaKnown RBP27.24■■□□□ 1.95
CIRBP-245ENST00000621399 ANKRD30BQ9BXX2 1392 aa27.23■■□□□ 1.95
CIRBP-245ENST00000621399 LTKP29376 864 aa27.23■■□□□ 1.95
CIRBP-245ENST00000621399 HDGFP51858 240 aaKnown RBP27.22■■□□□ 1.95
CIRBP-245ENST00000621399 RIMS2Q9UQ26 1411 aa27.2■■□□□ 1.94
CIRBP-245ENST00000621399 SCAF11Q99590 1463 aaKnown RBP27.19■■□□□ 1.94
CIRBP-245ENST00000621399 PPP1R15AO75807 674 aaPredicted RBP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms