RNA–Protein interactions for RNA: ENST00000621198.4

SYN2-206, Transcript of synapsin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYN2, Length 2,674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-206ENST00000621198 SAMD9LQ8IVG5 1584 aa25.64■■□□□ 1.7
SYN2-206ENST00000621198 CCDC141Q6ZP82 1450 aa25.64■■□□□ 1.69
SYN2-206ENST00000621198 FAM135AQ9P2D6 1515 aa25.64■■□□□ 1.69
SYN2-206ENST00000621198 SALL2Q9Y467 1007 aaPredicted RBP25.63■■□□□ 1.69
SYN2-206ENST00000621198 ARHGEF5Q12774 1597 aa25.62■■□□□ 1.69
SYN2-206ENST00000621198 NBPF1Q3BBV0 1214 aa25.61■■□□□ 1.69
SYN2-206ENST00000621198 CCDC136Q96JN2 1154 aa25.61■■□□□ 1.69
SYN2-206ENST00000621198 MYBBP1AQ9BQG0 1328 aaKnown RBP25.61■■□□□ 1.69
SYN2-206ENST00000621198 CCDC144AA2RUR9 1427 aa25.6■■□□□ 1.69
SYN2-206ENST00000621198 CDC42BPBQ9Y5S2 1711 aa25.6■■□□□ 1.69
SYN2-206ENST00000621198 SYCP2Q9BX26 1530 aa25.57■■□□□ 1.68
SYN2-206ENST00000621198 RALBP1Q15311 655 aa25.57■■□□□ 1.68
SYN2-206ENST00000621198 RNF123Q5XPI4 1314 aa25.56■■□□□ 1.68
SYN2-206ENST00000621198 PREX2Q70Z35 1606 aa25.55■■□□□ 1.68
SYN2-206ENST00000621198 BRD4O60885 1362 aaPredicted RBP25.55■■□□□ 1.68
SYN2-206ENST00000621198 PRAG1Q86YV5 1406 aa25.55■■□□□ 1.68
SYN2-206ENST00000621198 ARHGAP5Q13017 1502 aa25.54■■□□□ 1.68
SYN2-206ENST00000621198 LRPPRCP42704 1394 aaKnown RBP25.53■■□□□ 1.68
SYN2-206ENST00000621198 RSPH4AQ5TD94 716 aa25.51■■□□□ 1.67
SYN2-206ENST00000621198 TTC37Q6PGP7 1564 aa25.5■■□□□ 1.67
SYN2-206ENST00000621198 PLA2R1Q13018 1463 aa25.5■■□□□ 1.67
SYN2-206ENST00000621198 KTN1Q86UP2 1357 aaKnown RBP25.49■■□□□ 1.67
SYN2-206ENST00000621198 CC2D1BQ5T0F9 858 aaKnown RBP25.49■■□□□ 1.67
SYN2-206ENST00000621198 TRPM1Q7Z4N2 1603 aa25.49■■□□□ 1.67
SYN2-206ENST00000621198 E9PCH4 1651 aa25.48■■□□□ 1.67
SYN2-206ENST00000621198 NLRP13Q86W25 1043 aa25.47■■□□□ 1.67
SYN2-206ENST00000621198 A2MP01023 1474 aa25.47■■□□□ 1.67
SYN2-206ENST00000621198 PLEKHH2Q8IVE3 1493 aa25.47■■□□□ 1.67
SYN2-206ENST00000621198 DISP3Q9P2K9 1392 aa25.44■■□□□ 1.66
SYN2-206ENST00000621198 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.44■■□□□ 1.66
SYN2-206ENST00000621198 PARD3Q8TEW0 1356 aa25.43■■□□□ 1.66
SYN2-206ENST00000621198 PER1O15534 1290 aaPredicted RBP25.42■■□□□ 1.66
SYN2-206ENST00000621198 RRP1P56182 461 aaKnown RBP25.41■■□□□ 1.66
SYN2-206ENST00000621198 UNC13BO14795 1591 aa25.4■■□□□ 1.66
SYN2-206ENST00000621198 TESK2Q96S53 571 aa25.4■■□□□ 1.66
SYN2-206ENST00000621198 PANK3Q9H999 370 aa25.4■■□□□ 1.66
SYN2-206ENST00000621198 RCAN3Q9UKA8 241 aa25.4■■□□□ 1.66
SYN2-206ENST00000621198 CHD1O14646 1710 aa25.39■■□□□ 1.66
SYN2-206ENST00000621198 EXOC6Q8TAG9 804 aa25.39■■□□□ 1.66
SYN2-206ENST00000621198 ERCC6L2Q5T890 1561 aa25.38■■□□□ 1.65
SYN2-206ENST00000621198 CDCA7LQ96GN5 454 aa25.38■■□□□ 1.65
SYN2-206ENST00000621198 GPRASP1Q5JY77 1395 aa25.36■■□□□ 1.65
SYN2-206ENST00000621198 COL17A1Q9UMD9 1497 aaPredicted RBP25.36■■□□□ 1.65
SYN2-206ENST00000621198 MAST1Q9Y2H9 1570 aa25.35■■□□□ 1.65
SYN2-206ENST00000621198 ERBINQ96RT1 1412 aa25.35■■□□□ 1.65
SYN2-206ENST00000621198 MYO5CQ9NQX4 1742 aa25.34■■□□□ 1.65
SYN2-206ENST00000621198 PAK3O75914 559 aaPredicted RBP25.33■■□□□ 1.65
SYN2-206ENST00000621198 NOP58Q9Y2X3 529 aaKnown RBP25.33■■□□□ 1.65
SYN2-206ENST00000621198 PRDM15P57071 1507 aaPredicted RBP25.33■■□□□ 1.65
SYN2-206ENST00000621198 TMF1P82094 1093 aa25.33■■□□□ 1.65
SYN2-206ENST00000621198 IQGAP3Q86VI3 1631 aa25.33■■□□□ 1.64
SYN2-206ENST00000621198 BCL11AQ9H165 835 aa25.31■■□□□ 1.64
SYN2-206ENST00000621198 PLXNC1O60486 1568 aa25.3■■□□□ 1.64
SYN2-206ENST00000621198 DUOX2Q9NRD8 1548 aa25.29■■□□□ 1.64
SYN2-206ENST00000621198 ABCC2Q92887 1545 aa25.29■■□□□ 1.64
SYN2-206ENST00000621198 PLIN1O60240 522 aa25.28■■□□□ 1.64
SYN2-206ENST00000621198 ANP32AP39687 249 aaKnown RBP25.27■■□□□ 1.64
SYN2-206ENST00000621198 PDE3BQ13370 1112 aa25.26■■□□□ 1.63
SYN2-206ENST00000621198 NBR1Q14596 966 aa25.26■■□□□ 1.63
SYN2-206ENST00000621198 EFCAB2Q5VUJ9 269 aa25.25■■□□□ 1.63
SYN2-206ENST00000621198 EIF2AK4Q9P2K8 1649 aaKnown RBP25.24■■□□□ 1.63
SYN2-206ENST00000621198 SHROOM2Q13796 1616 aa25.24■■□□□ 1.63
SYN2-206ENST00000621198 TRAPPC8Q9Y2L5 1435 aa25.24■■□□□ 1.63
SYN2-206ENST00000621198 LAMC1P11047 1609 aa25.23■■□□□ 1.63
SYN2-206ENST00000621198 WASHC2CQ9Y4E1 1318 aa25.23■■□□□ 1.63
SYN2-206ENST00000621198 PLCH2O75038 1416 aa25.22■■□□□ 1.63
SYN2-206ENST00000621198 AFAP1Q8N556 730 aa25.21■■□□□ 1.63
SYN2-206ENST00000621198 NPM2Q86SE8 214 aaKnown RBP25.2■■□□□ 1.63
SYN2-206ENST00000621198 MAGI2Q86UL8 1455 aa25.2■■□□□ 1.62
SYN2-206ENST00000621198 IPO9Q96P70 1041 aaKnown RBP25.2■■□□□ 1.62
SYN2-206ENST00000621198 ATP10AO60312 1499 aa25.19■■□□□ 1.62
SYN2-206ENST00000621198 ADAMTS8Q9UP79 889 aa25.19■■□□□ 1.62
SYN2-206ENST00000621198 BLMP54132 1417 aaPredicted RBP25.18■■□□□ 1.62
SYN2-206ENST00000621198 KNSTRNQ9Y448 316 aa25.18■■□□□ 1.62
SYN2-206ENST00000621198 SPAG9O60271 1321 aaKnown RBP25.18■■□□□ 1.62
SYN2-206ENST00000621198 ZCCHC11Q5TAX3 1644 aaKnown RBP25.15■■□□□ 1.62
SYN2-206ENST00000621198 ABCC1P33527 1531 aa25.14■■□□□ 1.62
SYN2-206ENST00000621198 SKAP1Q86WV1 359 aa25.14■■□□□ 1.61
SYN2-206ENST00000621198 CRBNQ96SW2 442 aa25.14■■□□□ 1.61
SYN2-206ENST00000621198 ZBTB47Q9UFB7 747 aaPredicted RBP25.14■■□□□ 1.61
SYN2-206ENST00000621198 MYT1LQ9UL68 1186 aa25.13■■□□□ 1.61
SYN2-206ENST00000621198 RNF17Q9BXT8 1623 aaKnown RBP25.13■■□□□ 1.61
SYN2-206ENST00000621198 WDR7Q9Y4E6 1490 aa25.12■■□□□ 1.61
SYN2-206ENST00000621198 PPP2R1AP30153 589 aa25.12■■□□□ 1.61
SYN2-206ENST00000621198 WDR43Q15061 677 aaKnown RBP eCLIP25.11■■□□□ 1.61
SYN2-206ENST00000621198 TCERG1O14776 1098 aaKnown RBP25.1■■□□□ 1.61
SYN2-206ENST00000621198 MADDQ8WXG6 1647 aa25.1■■□□□ 1.61
SYN2-206ENST00000621198 C20orf194Q5TEA3 1177 aa25.09■■□□□ 1.61
SYN2-206ENST00000621198 PDE4AP27815 886 aa25.09■■□□□ 1.61
SYN2-206ENST00000621198 DEKP35659 375 aaKnown RBP25.08■■□□□ 1.6
SYN2-206ENST00000621198 AMER1Q5JTC6 1135 aaPredicted RBP25.07■■□□□ 1.6
SYN2-206ENST00000621198 ZMYM4Q5VZL5 1548 aa25.07■■□□□ 1.6
SYN2-206ENST00000621198 PLEKHH1Q9ULM0 1364 aa25.05■■□□□ 1.6
SYN2-206ENST00000621198 IQGAP1P46940 1657 aa25.03■■□□□ 1.6
SYN2-206ENST00000621198 TRPM2O94759 1503 aa25.03■■□□□ 1.6
SYN2-206ENST00000621198 SCAF11Q99590 1463 aaKnown RBP25.03■■□□□ 1.6
SYN2-206ENST00000621198 INSRP06213 1382 aa25.03■■□□□ 1.6
SYN2-206ENST00000621198 CLTCL1P53675 1640 aa25.03■■□□□ 1.6
SYN2-206ENST00000621198 KIF3BO15066 747 aa25.02■■□□□ 1.6
SYN2-206ENST00000621198 CCDC146Q8IYE0 955 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms