RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SYNJ2O15056 1496 aa9.07□□□□□ -0.96
NEDD9-216ENST00000620854 TEX14Q8IWB6 1497 aa9.07□□□□□ -0.96
NEDD9-216ENST00000620854 MAGI1Q96QZ7 1491 aaPredicted RBP9.07□□□□□ -0.96
NEDD9-216ENST00000620854 MS4A1P11836 297 aa9.07□□□□□ -0.96
NEDD9-216ENST00000620854 UGGT2Q9NYU1 1516 aa9.07□□□□□ -0.96
NEDD9-216ENST00000620854 ABCC5O15440 1437 aa9.06□□□□□ -0.96
NEDD9-216ENST00000620854 EHBP1L1Q8N3D4 1523 aa9.06□□□□□ -0.96
NEDD9-216ENST00000620854 PANK3Q9H999 370 aa9.06□□□□□ -0.96
NEDD9-216ENST00000620854 KANK1Q14678 1352 aa9.06□□□□□ -0.96
NEDD9-216ENST00000620854 DAPK1P53355 1430 aa9.06□□□□□ -0.96
NEDD9-216ENST00000620854 SLKQ9H2G2 1235 aaPredicted RBP9.06□□□□□ -0.96
NEDD9-216ENST00000620854 ROCK2O75116 1388 aaKnown RBP9.05□□□□□ -0.96
NEDD9-216ENST00000620854 GGT6Q6P531 493 aa9.05□□□□□ -0.96
NEDD9-216ENST00000620854 ADAMTS8Q9UP79 889 aa9.05□□□□□ -0.96
NEDD9-216ENST00000620854 SPAG9O60271 1321 aaKnown RBP9.05□□□□□ -0.96
NEDD9-216ENST00000620854 GRIN2AQ12879 1464 aa9.05□□□□□ -0.96
NEDD9-216ENST00000620854 KTN1Q86UP2 1357 aaKnown RBP9.05□□□□□ -0.96
NEDD9-216ENST00000620854 SENP3Q9H4L4 574 aaPredicted RBP9.05□□□□□ -0.96
NEDD9-216ENST00000620854 EPRSP07814 1512 aaKnown RBP9.05□□□□□ -0.96
NEDD9-216ENST00000620854 HSP90AA1P07900 732 aaKnown RBP9.05□□□□□ -0.96
NEDD9-216ENST00000620854 CCDC146Q8IYE0 955 aa9.05□□□□□ -0.96
NEDD9-216ENST00000620854 SPRYD3Q8NCJ5 442 aa9.05□□□□□ -0.96
NEDD9-216ENST00000620854 BRD4O60885 1362 aaPredicted RBP9.04□□□□□ -0.96
NEDD9-216ENST00000620854 LRRIQ1Q96JM4 1722 aa9.04□□□□□ -0.96
NEDD9-216ENST00000620854 IQGAP2Q13576 1575 aa9.04□□□□□ -0.96
NEDD9-216ENST00000620854 MLECQ14165 292 aa9.04□□□□□ -0.96
NEDD9-216ENST00000620854 WASHC2CQ9Y4E1 1318 aa9.04□□□□□ -0.96
NEDD9-216ENST00000620854 MIA2Q96PC5 1412 aa9.03□□□□□ -0.96
NEDD9-216ENST00000620854 BCORL1Q5H9F3 1711 aa9.03□□□□□ -0.96
NEDD9-216ENST00000620854 PDE3BQ13370 1112 aa9.03□□□□□ -0.96
NEDD9-216ENST00000620854 WDR43Q15061 677 aaKnown RBP eCLIP9.03□□□□□ -0.96
NEDD9-216ENST00000620854 THOC2Q8NI27 1593 aaKnown RBP9.02□□□□□ -0.97
NEDD9-216ENST00000620854 LRPPRCP42704 1394 aaKnown RBP9.02□□□□□ -0.97
NEDD9-216ENST00000620854 KIF3BO15066 747 aa9.02□□□□□ -0.97
NEDD9-216ENST00000620854 HECW1Q76N89 1606 aa9.02□□□□□ -0.97
NEDD9-216ENST00000620854 KIF21AQ7Z4S6 1674 aa9.02□□□□□ -0.97
NEDD9-216ENST00000620854 FAM161AQ3B820 660 aa9.01□□□□□ -0.97
NEDD9-216ENST00000620854 UPF2Q9HAU5 1272 aaKnown RBP9.01□□□□□ -0.97
NEDD9-216ENST00000620854 NEUROD2Q15784 382 aa9.01□□□□□ -0.97
NEDD9-216ENST00000620854 CTTNBP2Q8WZ74 1663 aa9.01□□□□□ -0.97
NEDD9-216ENST00000620854 KIAA1107Q9UPP5 1409 aa9□□□□□ -0.97
NEDD9-216ENST00000620854 TCOF1Q13428 1488 aaKnown RBP9□□□□□ -0.97
NEDD9-216ENST00000620854 BCAR3O75815 825 aa9□□□□□ -0.97
NEDD9-216ENST00000620854 GZF1Q9H116 711 aaPredicted RBP9□□□□□ -0.97
NEDD9-216ENST00000620854 POGKQ9P215 609 aa9□□□□□ -0.97
NEDD9-216ENST00000620854 PER1O15534 1290 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-216ENST00000620854 C8orf34Q49A92 452 aa8.99□□□□□ -0.97
NEDD9-216ENST00000620854 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-216ENST00000620854 PZPP20742 1482 aa8.99□□□□□ -0.97
NEDD9-216ENST00000620854 CENPQQ7L2Z9 268 aaPredicted RBP8.99□□□□□ -0.97
NEDD9-216ENST00000620854 ROCK1Q13464 1354 aa8.98□□□□□ -0.97
NEDD9-216ENST00000620854 KNSTRNQ9Y448 316 aa8.98□□□□□ -0.97
NEDD9-216ENST00000620854 ANKRD50Q9ULJ7 1429 aa8.98□□□□□ -0.97
NEDD9-216ENST00000620854 SEC24BO95487 1268 aa8.98□□□□□ -0.97
NEDD9-216ENST00000620854 GOLGA2Q08379 1002 aa8.97□□□□□ -0.97
NEDD9-216ENST00000620854 FAM69CQ0P6D2 419 aa8.97□□□□□ -0.97
NEDD9-216ENST00000620854 APAF1O14727 1248 aa8.97□□□□□ -0.97
NEDD9-216ENST00000620854 TROQ12816 1431 aaPredicted RBP8.97□□□□□ -0.97
NEDD9-216ENST00000620854 GCC2Q8IWJ2 1684 aa8.97□□□□□ -0.97
NEDD9-216ENST00000620854 TNNT2P45379 298 aaPredicted RBP8.96□□□□□ -0.97
NEDD9-216ENST00000620854 SPINK5Q9NQ38 1064 aaPredicted RBP8.96□□□□□ -0.97
NEDD9-216ENST00000620854 ARHGEF11O15085 1522 aa8.96□□□□□ -0.97
NEDD9-216ENST00000620854 DUSP27Q5VZP5 1158 aa8.96□□□□□ -0.97
NEDD9-216ENST00000620854 COG6Q9Y2V7 657 aa8.96□□□□□ -0.98
NEDD9-216ENST00000620854 SAMD9Q5K651 1589 aa8.96□□□□□ -0.98
NEDD9-216ENST00000620854 IGHDP01880 384 aa8.95□□□□□ -0.98
NEDD9-216ENST00000620854 WDR62O43379 1518 aa8.95□□□□□ -0.98
NEDD9-216ENST00000620854 BCL2L13Q9BXK5 485 aa8.95□□□□□ -0.98
NEDD9-216ENST00000620854 TMF1P82094 1093 aa8.95□□□□□ -0.98
NEDD9-216ENST00000620854 PANK1Q8TE04 598 aa8.95□□□□□ -0.98
NEDD9-216ENST00000620854 CLUAP1Q96AJ1 413 aa8.95□□□□□ -0.98
NEDD9-216ENST00000620854 DISP3Q9P2K9 1392 aa8.94□□□□□ -0.98
NEDD9-216ENST00000620854 KDM2BQ8NHM5 1336 aa8.94□□□□□ -0.98
NEDD9-216ENST00000620854 ANP32BQ92688 251 aaKnown RBP8.94□□□□□ -0.98
NEDD9-216ENST00000620854 PLEKHH1Q9ULM0 1364 aa8.94□□□□□ -0.98
NEDD9-216ENST00000620854 PLB1Q6P1J6 1458 aa8.94□□□□□ -0.98
NEDD9-216ENST00000620854 PARD3Q8TEW0 1356 aa8.94□□□□□ -0.98
NEDD9-216ENST00000620854 RRP7AQ9Y3A4 280 aaKnown RBP8.93□□□□□ -0.98
NEDD9-216ENST00000620854 PPP2R1AP30153 589 aa8.93□□□□□ -0.98
NEDD9-216ENST00000620854 CDCA8Q53HL2 280 aa8.93□□□□□ -0.98
NEDD9-216ENST00000620854 ARHGAP5Q13017 1502 aa8.92□□□□□ -0.98
NEDD9-216ENST00000620854 DMRT2Q9Y5R5 561 aa8.92□□□□□ -0.98
NEDD9-216ENST00000620854 KDM5CP41229 1560 aa8.92□□□□□ -0.98
NEDD9-216ENST00000620854 TESK2Q96S53 571 aa8.92□□□□□ -0.98
NEDD9-216ENST00000620854 CAMSAP2Q08AD1 1489 aa8.91□□□□□ -0.98
NEDD9-216ENST00000620854 AFAP1Q8N556 730 aa8.91□□□□□ -0.98
NEDD9-216ENST00000620854 NAP1L5Q96NT1 182 aaPredicted RBP8.91□□□□□ -0.98
NEDD9-216ENST00000620854 EIF4G3O43432 1585 aaKnown RBP8.91□□□□□ -0.98
NEDD9-216ENST00000620854 UBE2Q2Q8WVN8 375 aa8.9□□□□□ -0.98
NEDD9-216ENST00000620854 ADAMTS12P58397 1594 aa8.9□□□□□ -0.98
NEDD9-216ENST00000620854 ABCA5Q8WWZ7 1642 aa8.9□□□□□ -0.98
NEDD9-216ENST00000620854 HDGFP51858 240 aaKnown RBP8.9□□□□□ -0.98
NEDD9-216ENST00000620854 RRAGDQ9NQL2 400 aaPredicted RBP8.9□□□□□ -0.98
NEDD9-216ENST00000620854 BECN1Q14457 450 aa8.9□□□□□ -0.98
NEDD9-216ENST00000620854 RALGAPBQ86X10 1494 aa8.9□□□□□ -0.99
NEDD9-216ENST00000620854 MBD5Q9P267 1494 aa8.9□□□□□ -0.99
NEDD9-216ENST00000620854 TNNQ9UQP3 1299 aa8.9□□□□□ -0.99
NEDD9-216ENST00000620854 CCDC144AA2RUR9 1427 aa8.89□□□□□ -0.99
NEDD9-216ENST00000620854 SLFN5Q08AF3 891 aa8.89□□□□□ -0.99
NEDD9-216ENST00000620854 NUP153P49790 1475 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms