RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 PZPP20742 1482 aa40.41■■■■■ 4.06
BRF1-221ENST00000619151 SLC4A1APQ9BWU0 796 aaKnown RBP40.41■■■■■ 4.06
BRF1-221ENST00000619151 A2MP01023 1474 aa40.41■■■■■ 4.06
BRF1-221ENST00000619151 REREQ9P2R6 1566 aa40.38■■■■■ 4.05
BRF1-221ENST00000619151 SIN3AQ96ST3 1273 aa40.37■■■■■ 4.05
BRF1-221ENST00000619151 NUP155O75694 1391 aa40.34■■■■■ 4.05
BRF1-221ENST00000619151 NEUROD1Q13562 356 aa40.34■■■■■ 4.05
BRF1-221ENST00000619151 UNC13BO14795 1591 aa40.34■■■■■ 4.05
BRF1-221ENST00000619151 AGLP35573 1532 aa40.27■■■■■ 4.04
BRF1-221ENST00000619151 TONSLQ96HA7 1378 aa40.23■■■■■ 4.03
BRF1-221ENST00000619151 ANKRD30BQ9BXX2 1392 aa40.22■■■■■ 4.03
BRF1-221ENST00000619151 EIF2AK4Q9P2K8 1649 aaKnown RBP40.22■■■■■ 4.03
BRF1-221ENST00000619151 FAM135AQ9P2D6 1515 aa40.2■■■■■ 4.03
BRF1-221ENST00000619151 BCORL1Q5H9F3 1711 aa40.2■■■■■ 4.03
BRF1-221ENST00000619151 KIF3BO15066 747 aa40.18■■■■■ 4.02
BRF1-221ENST00000619151 SIGLEC1Q9BZZ2 1709 aa40.18■■■■■ 4.02
BRF1-221ENST00000619151 IQGAP3Q86VI3 1631 aa40.17■■■■■ 4.02
BRF1-221ENST00000619151 PKD2Q13563 968 aa40.16■■■■■ 4.02
BRF1-221ENST00000619151 FOXD1Q16676 465 aa40.15■■■■■ 4.02
BRF1-221ENST00000619151 ARID4BQ4LE39 1312 aaPredicted RBP40.09■■■■■ 4.01
BRF1-221ENST00000619151 DEPDC5O75140 1603 aa40.08■■■■■ 4.01
BRF1-221ENST00000619151 RPRD2Q5VT52 1461 aaKnown RBP40.08■■■■■ 4.01
BRF1-221ENST00000619151 RNF17Q9BXT8 1623 aaKnown RBP40.07■■■■■ 4.01
BRF1-221ENST00000619151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.06■■■■■ 44e-6■■□□□ 14.4
BRF1-221ENST00000619151 GGT6Q6P531 493 aa40.03■■■■■ 4
BRF1-221ENST00000619151 PPP6R1Q9UPN7 881 aa40.01■■■■■ 4
BRF1-221ENST00000619151 MROH1Q8NDA8 1641 aa40■■■■□ 3.99
BRF1-221ENST00000619151 PPP1R15AO75807 674 aaPredicted RBP40■■■■□ 3.99
BRF1-221ENST00000619151 KANK1Q14678 1352 aa40■■■■□ 3.99
BRF1-221ENST00000619151 PRDM15P57071 1507 aaPredicted RBP39.99■■■■□ 3.99
BRF1-221ENST00000619151 ZNF316A6NFI3 1004 aaPredicted RBP39.97■■■■□ 3.99
BRF1-221ENST00000619151 MLECQ14165 292 aa39.95■■■■□ 3.99
BRF1-221ENST00000619151 VWDEQ8N2E2 1590 aa39.93■■■■□ 3.98
BRF1-221ENST00000619151 TET3O43151 1660 aa39.86■■■■□ 3.97
BRF1-221ENST00000619151 WASHC2CQ9Y4E1 1318 aa39.86■■■■□ 3.97
BRF1-221ENST00000619151 LMTK2Q8IWU2 1503 aa39.84■■■■□ 3.97
BRF1-221ENST00000619151 ABCC3O15438 1527 aa39.82■■■■□ 3.96
BRF1-221ENST00000619151 L3MBTL2Q969R5 705 aa39.8■■■■□ 3.96
BRF1-221ENST00000619151 ADAMTSL3P82987 1691 aa39.79■■■■□ 3.96
BRF1-221ENST00000619151 ZC3H13Q5T200 1668 aaKnown RBP39.79■■■■□ 3.96
BRF1-221ENST00000619151 CCDC144AA2RUR9 1427 aa39.78■■■■□ 3.96
BRF1-221ENST00000619151 CNTLNQ9NXG0 1405 aa39.78■■■■□ 3.96
BRF1-221ENST00000619151 ESF1Q9H501 851 aaKnown RBP39.76■■■■□ 3.96
BRF1-221ENST00000619151 E9PCH4 1651 aa39.76■■■■□ 3.95
BRF1-221ENST00000619151 CEP152O94986 1710 aa39.73■■■■□ 3.95
BRF1-221ENST00000619151 PLA2R1Q13018 1463 aa39.71■■■■□ 3.95
BRF1-221ENST00000619151 CLTCQ00610 1675 aaKnown RBP39.7■■■■□ 3.95
BRF1-221ENST00000619151 FER1L4A9Z1Z3 1794 aa39.7■■■■□ 3.95
BRF1-221ENST00000619151 ARHGAP31Q2M1Z3 1444 aa39.68■■■■□ 3.94
BRF1-221ENST00000619151 MADDQ8WXG6 1647 aa39.68■■■■□ 3.94
BRF1-221ENST00000619151 EFCAB6Q5THR3 1501 aa39.68■■■■□ 3.94
BRF1-221ENST00000619151 ZMYM3Q14202 1370 aa39.65■■■■□ 3.94
BRF1-221ENST00000619151 CAMSAP1Q5T5Y3 1602 aa39.65■■■■□ 3.94
BRF1-221ENST00000619151 SPHKAPQ2M3C7 1700 aa39.65■■■■□ 3.94
BRF1-221ENST00000619151 MROH2AA6NES4 1674 aa39.65■■■■□ 3.94
BRF1-221ENST00000619151 TRPM2O94759 1503 aa39.65■■■■□ 3.94
BRF1-221ENST00000619151 PTPRTO14522 1441 aa39.63■■■■□ 3.93
BRF1-221ENST00000619151 NPATQ14207 1427 aa39.61■■■■□ 3.93
BRF1-221ENST00000619151 KDM4FA0A1W2PPD8 638 aa39.59■■■■□ 3.93
BRF1-221ENST00000619151 RIMS1Q86UR5 1692 aaKnown RBP39.57■■■■□ 3.92
BRF1-221ENST00000619151 DIEXFQ68CQ4 756 aaKnown RBP39.5■■■■□ 3.91
BRF1-221ENST00000619151 UHRF1BP1Q6BDS2 1440 aa39.49■■■■□ 3.91
BRF1-221ENST00000619151 C3P01024 1663 aa39.49■■■■□ 3.91
BRF1-221ENST00000619151 PTPRMP28827 1452 aa39.48■■■■□ 3.91
BRF1-221ENST00000619151 CEBPAP49715 358 aaPredicted RBP39.47■■■■□ 3.91
BRF1-221ENST00000619151 FBXO31Q5XUX0 539 aaPredicted RBP39.47■■■■□ 3.91
BRF1-221ENST00000619151 NOS1P29475 1434 aa39.46■■■■□ 3.91
BRF1-221ENST00000619151 NBPF8Q3BBV2 869 aa39.45■■■■□ 3.91
BRF1-221ENST00000619151 CLTCL1P53675 1640 aa39.44■■■■□ 3.9
BRF1-221ENST00000619151 ERVK-7P63135 1459 aa39.44■■■■□ 3.9
BRF1-221ENST00000619151 CFAP65Q6ZU64 1925 aaKnown RBP39.43■■■■□ 3.9
BRF1-221ENST00000619151 SPATA31D1Q6ZQQ2 1576 aa39.42■■■■□ 3.9
BRF1-221ENST00000619151 PREX1Q8TCU6 1659 aa39.41■■■■□ 3.9
BRF1-221ENST00000619151 NEURL4Q96JN8 1562 aa39.41■■■■□ 3.9
BRF1-221ENST00000619151 DCAF11Q8TEB1 546 aa39.4■■■■□ 3.9
BRF1-221ENST00000619151 SPATA31E1Q6ZUB1 1445 aa39.39■■■■□ 3.9
BRF1-221ENST00000619151 RGL3Q3MIN7 710 aa39.35■■■■□ 3.89
BRF1-221ENST00000619151 RALGAPBQ86X10 1494 aa39.34■■■■□ 3.89
BRF1-221ENST00000619151 EIF4G2P78344 907 aaKnown RBP eCLIP39.33■■■■□ 3.891e-6■■■■■ 36.9
BRF1-221ENST00000619151 ZNF326Q5BKZ1 582 aaKnown RBP39.33■■■■□ 3.89
BRF1-221ENST00000619151 SYNMO15061 1565 aa39.32■■■■□ 3.88
BRF1-221ENST00000619151 TNRQ92752 1358 aa39.31■■■■□ 3.88
BRF1-221ENST00000619151 KDM2AQ9Y2K7 1162 aa39.31■■■■□ 3.88
BRF1-221ENST00000619151 SLC52A1Q9NWF4 448 aa39.3■■■■□ 3.88
BRF1-221ENST00000619151 KIF1BO60333 1816 aa39.3■■■■□ 3.88
BRF1-221ENST00000619151 PLPPR3Q6T4P5 718 aa39.3■■■■□ 3.88
BRF1-221ENST00000619151 STAC3Q96MF2 364 aa39.3■■■■□ 3.88
BRF1-221ENST00000619151 SETD1BQ9UPS6 1966 aaKnown RBP39.28■■■■□ 3.88
BRF1-221ENST00000619151 PRAG1Q86YV5 1406 aa39.27■■■■□ 3.88
BRF1-221ENST00000619151 UGGT1Q9NYU2 1555 aa39.24■■■■□ 3.87
BRF1-221ENST00000619151 PIK3C2BO00750 1634 aa39.23■■■■□ 3.87
BRF1-221ENST00000619151 IDI1Q13907 227 aa39.23■■■■□ 3.87
BRF1-221ENST00000619151 HSPA5P11021 654 aaKnown RBP39.22■■■■□ 3.87
BRF1-221ENST00000619151 NLRP1Q9C000 1473 aa39.19■■■■□ 3.86
BRF1-221ENST00000619151 TRPM1Q7Z4N2 1603 aa39.18■■■■□ 3.86
BRF1-221ENST00000619151 ADGRB3O60242 1522 aa39.17■■■■□ 3.86
BRF1-221ENST00000619151 HIRIP3Q9BW71 556 aaPredicted RBP39.15■■■■□ 3.86
BRF1-221ENST00000619151 ROCK2O75116 1388 aaKnown RBP39.12■■■■□ 3.85
BRF1-221ENST00000619151 CARD11Q9BXL7 1154 aa39.1■■■■□ 3.85
BRF1-221ENST00000619151 USP47Q96K76 1375 aa39.1■■■■□ 3.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms