RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 SLC26A8Q96RN1 970 aa6.81□□□□□ -1.32
SYCP1-210ENST00000618516 RICTORQ6R327 1708 aa6.8□□□□□ -1.32
SYCP1-210ENST00000618516 ABCA6Q8N139 1617 aa6.8□□□□□ -1.32
SYCP1-210ENST00000618516 NCOA1Q15788 1441 aa6.8□□□□□ -1.32
SYCP1-210ENST00000618516 PTPRMP28827 1452 aa6.8□□□□□ -1.32
SYCP1-210ENST00000618516 ITSN2Q9NZM3 1697 aa6.8□□□□□ -1.32
SYCP1-210ENST00000618516 TRIM26Q12899 539 aaPredicted RBP6.8□□□□□ -1.32
SYCP1-210ENST00000618516 MADDQ8WXG6 1647 aa6.8□□□□□ -1.32
SYCP1-210ENST00000618516 KANK1Q14678 1352 aa6.79□□□□□ -1.32
SYCP1-210ENST00000618516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.79□□□□□ -1.32
SYCP1-210ENST00000618516 KIDINS220Q9ULH0 1771 aa6.79□□□□□ -1.32
SYCP1-210ENST00000618516 DIP2CQ9Y2E4 1556 aa6.79□□□□□ -1.32
SYCP1-210ENST00000618516 MLH3Q9UHC1 1453 aa6.79□□□□□ -1.32
SYCP1-210ENST00000618516 IDI1Q13907 227 aa6.79□□□□□ -1.32
SYCP1-210ENST00000618516 CFAP74Q9C0B2 1584 aa6.78□□□□□ -1.32
SYCP1-210ENST00000618516 RIMS1Q86UR5 1692 aaKnown RBP6.78□□□□□ -1.32
SYCP1-210ENST00000618516 ARHGEF40Q8TER5 1519 aa6.78□□□□□ -1.32
SYCP1-210ENST00000618516 MAP3K1Q13233 1512 aa6.77□□□□□ -1.32
SYCP1-210ENST00000618516 SAFB2Q14151 953 aaKnown RBP eCLIP6.77□□□□□ -1.33
SYCP1-210ENST00000618516 C14orf37Q86TY3 774 aa6.77□□□□□ -1.33
SYCP1-210ENST00000618516 SIN3AQ96ST3 1273 aa6.77□□□□□ -1.33
SYCP1-210ENST00000618516 RAB3GAP2Q9H2M9 1393 aa6.77□□□□□ -1.33
SYCP1-210ENST00000618516 TXNDC2Q86VQ3 553 aa6.76□□□□□ -1.33
SYCP1-210ENST00000618516 CCER1Q8TC90 406 aaPredicted RBP6.76□□□□□ -1.33
SYCP1-210ENST00000618516 NUTM2FA1L443 756 aa6.76□□□□□ -1.33
SYCP1-210ENST00000618516 MPHOSPH9Q99550 1183 aa6.76□□□□□ -1.33
SYCP1-210ENST00000618516 PIP4K2BP78356 416 aa6.76□□□□□ -1.33
SYCP1-210ENST00000618516 STK26Q9P289 416 aa6.76□□□□□ -1.33
SYCP1-210ENST00000618516 MAGI2Q86UL8 1455 aa6.75□□□□□ -1.33
SYCP1-210ENST00000618516 KDM5CP41229 1560 aa6.75□□□□□ -1.33
SYCP1-210ENST00000618516 RRBP1Q9P2E9 1410 aaKnown RBP6.74□□□□□ -1.33
SYCP1-210ENST00000618516 NAIPQ13075 1403 aa6.74□□□□□ -1.33
SYCP1-210ENST00000618516 TNRQ92752 1358 aa6.74□□□□□ -1.33
SYCP1-210ENST00000618516 ZNF335Q9H4Z2 1342 aaPredicted RBP6.74□□□□□ -1.33
SYCP1-210ENST00000618516 UHRF1BP1Q6BDS2 1440 aa6.74□□□□□ -1.33
SYCP1-210ENST00000618516 LTKP29376 864 aa6.73□□□□□ -1.33
SYCP1-210ENST00000618516 RTEL1-TNFRSF6BF6WH68 1400 aa6.73□□□□□ -1.33
SYCP1-210ENST00000618516 UGGT1Q9NYU2 1555 aa6.73□□□□□ -1.33
SYCP1-210ENST00000618516 DNMT1P26358 1616 aaKnown RBP6.73□□□□□ -1.33
SYCP1-210ENST00000618516 EID1Q9Y6B2 187 aa6.72□□□□□ -1.33
SYCP1-210ENST00000618516 CLTCQ00610 1675 aaKnown RBP6.72□□□□□ -1.33
SYCP1-210ENST00000618516 ZMYM4Q5VZL5 1548 aa6.72□□□□□ -1.33
SYCP1-210ENST00000618516 CNGB1Q14028 1251 aaPredicted RBP6.72□□□□□ -1.33
SYCP1-210ENST00000618516 ANKLE2Q86XL3 938 aa6.72□□□□□ -1.33
SYCP1-210ENST00000618516 THEMISQ8N1K5 641 aaPredicted RBP6.72□□□□□ -1.33
SYCP1-210ENST00000618516 TCOF1Q13428 1488 aaKnown RBP6.72□□□□□ -1.33
SYCP1-210ENST00000618516 INO80Q9ULG1 1556 aaPredicted RBP6.72□□□□□ -1.33
SYCP1-210ENST00000618516 NPATQ14207 1427 aa6.72□□□□□ -1.33
SYCP1-210ENST00000618516 SETD5Q9C0A6 1442 aa6.72□□□□□ -1.33
SYCP1-210ENST00000618516 TMEM132EQ6IEE7 984 aa6.72□□□□□ -1.33
SYCP1-210ENST00000618516 FER1L4A9Z1Z3 1794 aa6.71□□□□□ -1.33
SYCP1-210ENST00000618516 DCAF11Q8TEB1 546 aa6.71□□□□□ -1.34
SYCP1-210ENST00000618516 BCORL1Q5H9F3 1711 aa6.71□□□□□ -1.34
SYCP1-210ENST00000618516 DUOX2Q9NRD8 1548 aa6.71□□□□□ -1.34
SYCP1-210ENST00000618516 POLR3GLQ9BT43 218 aa6.7□□□□□ -1.34
SYCP1-210ENST00000618516 ARHGEF5Q12774 1597 aa6.7□□□□□ -1.34
SYCP1-210ENST00000618516 HIRIP3Q9BW71 556 aaPredicted RBP6.69□□□□□ -1.34
SYCP1-210ENST00000618516 RNF39Q9H2S5 420 aa6.69□□□□□ -1.34
SYCP1-210ENST00000618516 C1QBPQ07021 282 aaKnown RBP6.69□□□□□ -1.34
SYCP1-210ENST00000618516 ERBINQ96RT1 1412 aa6.68□□□□□ -1.34
SYCP1-210ENST00000618516 HFM1A2PYH4 1435 aa6.68□□□□□ -1.34
SYCP1-210ENST00000618516 ADGBQ8N7X0 1667 aa6.68□□□□□ -1.34
SYCP1-210ENST00000618516 CEP152O94986 1710 aa6.68□□□□□ -1.34
SYCP1-210ENST00000618516 ABCC3O15438 1527 aa6.68□□□□□ -1.34
SYCP1-210ENST00000618516 UBAP1LF5GYI3 381 aa6.67□□□□□ -1.34
SYCP1-210ENST00000618516 LMTK3Q96Q04 1460 aa6.67□□□□□ -1.34
SYCP1-210ENST00000618516 ROCK1Q13464 1354 aa6.67□□□□□ -1.34
SYCP1-210ENST00000618516 CNTLNQ9NXG0 1405 aa6.67□□□□□ -1.34
SYCP1-210ENST00000618516 SHANK2Q9UPX8 1470 aa6.67□□□□□ -1.34
SYCP1-210ENST00000618516 PROSER2Q86WR7 435 aaPredicted RBP6.67□□□□□ -1.34
SYCP1-210ENST00000618516 KDM5DQ9BY66 1539 aa6.67□□□□□ -1.34
SYCP1-210ENST00000618516 FAM135AQ9P2D6 1515 aa6.66□□□□□ -1.34
SYCP1-210ENST00000618516 ADAMTSL3P82987 1691 aa6.66□□□□□ -1.34
SYCP1-210ENST00000618516 CCDC144AA2RUR9 1427 aa6.66□□□□□ -1.34
SYCP1-210ENST00000618516 PRDM15P57071 1507 aaPredicted RBP6.66□□□□□ -1.34
SYCP1-210ENST00000618516 C3P01024 1663 aa6.66□□□□□ -1.34
SYCP1-210ENST00000618516 ADGRF5Q8IZF2 1346 aa6.65□□□□□ -1.34
SYCP1-210ENST00000618516 CFAP70Q5T0N1 1121 aa6.65□□□□□ -1.34
SYCP1-210ENST00000618516 SLC52A1Q9NWF4 448 aa6.65□□□□□ -1.34
SYCP1-210ENST00000618516 TRAK1Q9UPV9 953 aa6.65□□□□□ -1.34
SYCP1-210ENST00000618516 PLXNC1O60486 1568 aa6.65□□□□□ -1.34
SYCP1-210ENST00000618516 ERVK-7P63135 1459 aa6.65□□□□□ -1.35
SYCP1-210ENST00000618516 KCNA6P17658 529 aa6.65□□□□□ -1.35
SYCP1-210ENST00000618516 XPCQ01831 940 aaPredicted RBP6.65□□□□□ -1.35
SYCP1-210ENST00000618516 LMOD2Q6P5Q4 547 aa6.65□□□□□ -1.35
SYCP1-210ENST00000618516 CAMSAP1Q5T5Y3 1602 aa6.65□□□□□ -1.35
SYCP1-210ENST00000618516 AGLP35573 1532 aa6.64□□□□□ -1.35
SYCP1-210ENST00000618516 ADGRL2O95490 1459 aa6.64□□□□□ -1.35
SYCP1-210ENST00000618516 WAPLQ7Z5K2 1190 aa6.64□□□□□ -1.35
SYCP1-210ENST00000618516 CROCC2H7BZ55 1655 aa6.64□□□□□ -1.35
SYCP1-210ENST00000618516 ILDR1Q86SU0 546 aaPredicted RBP6.64□□□□□ -1.35
SYCP1-210ENST00000618516 DDX17Q92841 729 aaKnown RBP6.64□□□□□ -1.35
SYCP1-210ENST00000618516 PZPP20742 1482 aa6.64□□□□□ -1.35
SYCP1-210ENST00000618516 SETD1BQ9UPS6 1966 aaKnown RBP6.63□□□□□ -1.35
SYCP1-210ENST00000618516 L3MBTL2Q969R5 705 aa6.63□□□□□ -1.35
SYCP1-210ENST00000618516 AMOTL2Q9Y2J4 779 aa6.63□□□□□ -1.35
SYCP1-210ENST00000618516 MROH1Q8NDA8 1641 aa6.62□□□□□ -1.35
SYCP1-210ENST00000618516 TMEM2Q9UHN6 1383 aa6.62□□□□□ -1.35
SYCP1-210ENST00000618516 NOS1P29475 1434 aa6.62□□□□□ -1.35
SYCP1-210ENST00000618516 NBPF1Q3BBV0 1214 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms