RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 MAGI2Q86UL8 1455 aa23.86■■□□□ 1.41
SNAP47-213ENST00000617596 ZEB1P37275 1124 aaPredicted RBP23.84■■□□□ 1.41
SNAP47-213ENST00000617596 UNC13BO14795 1591 aa23.81■■□□□ 1.4
SNAP47-213ENST00000617596 ATP10AO60312 1499 aa23.81■■□□□ 1.4
SNAP47-213ENST00000617596 GGT6Q6P531 493 aa23.81■■□□□ 1.4
SNAP47-213ENST00000617596 ACIN1Q9UKV3 1341 aaKnown RBP23.8■■□□□ 1.4
SNAP47-213ENST00000617596 PKD2Q13563 968 aa23.8■■□□□ 1.4
SNAP47-213ENST00000617596 SIN3AQ96ST3 1273 aa23.79■■□□□ 1.4
SNAP47-213ENST00000617596 KDM5DQ9BY66 1539 aa23.78■■□□□ 1.4
SNAP47-213ENST00000617596 FAM135AQ9P2D6 1515 aa23.78■■□□□ 1.4
SNAP47-213ENST00000617596 EIF2AK4Q9P2K8 1649 aaKnown RBP23.78■■□□□ 1.4
SNAP47-213ENST00000617596 ARHGEF40Q8TER5 1519 aa23.77■■□□□ 1.4
SNAP47-213ENST00000617596 CLSPNQ9HAW4 1339 aa23.76■■□□□ 1.39
SNAP47-213ENST00000617596 NEUROD1Q13562 356 aa23.75■■□□□ 1.39
SNAP47-213ENST00000617596 DEPDC5O75140 1603 aa23.74■■□□□ 1.39
SNAP47-213ENST00000617596 MROH1Q8NDA8 1641 aa23.74■■□□□ 1.39
SNAP47-213ENST00000617596 MYT1Q01538 1121 aa23.74■■□□□ 1.39
SNAP47-213ENST00000617596 SIGLEC1Q9BZZ2 1709 aa23.73■■□□□ 1.39
SNAP47-213ENST00000617596 IQGAP3Q86VI3 1631 aa23.72■■□□□ 1.39
SNAP47-213ENST00000617596 KANK1Q14678 1352 aa23.71■■□□□ 1.39
SNAP47-213ENST00000617596 PRDM15P57071 1507 aaPredicted RBP23.71■■□□□ 1.39
SNAP47-213ENST00000617596 MLECQ14165 292 aa23.71■■□□□ 1.39
SNAP47-213ENST00000617596 RNF17Q9BXT8 1623 aaKnown RBP23.69■■□□□ 1.38
SNAP47-213ENST00000617596 ARID4BQ4LE39 1312 aaPredicted RBP23.68■■□□□ 1.38
SNAP47-213ENST00000617596 ANKRD30BQ9BXX2 1392 aa23.68■■□□□ 1.38
SNAP47-213ENST00000617596 REREQ9P2R6 1566 aa23.67■■□□□ 1.38
SNAP47-213ENST00000617596 VWDEQ8N2E2 1590 aa23.67■■□□□ 1.38
SNAP47-213ENST00000617596 BCORL1Q5H9F3 1711 aa23.67■■□□□ 1.38
SNAP47-213ENST00000617596 WASHC2CQ9Y4E1 1318 aa23.66■■□□□ 1.38
SNAP47-213ENST00000617596 AGLP35573 1532 aa23.63■■□□□ 1.37
SNAP47-213ENST00000617596 CEP152O94986 1710 aa23.61■■□□□ 1.37
SNAP47-213ENST00000617596 ABCC3O15438 1527 aa23.6■■□□□ 1.37
SNAP47-213ENST00000617596 E9PCH4 1651 aa23.58■■□□□ 1.37
SNAP47-213ENST00000617596 TET3O43151 1660 aa23.58■■□□□ 1.37
SNAP47-213ENST00000617596 PLA2R1Q13018 1463 aa23.58■■□□□ 1.36
SNAP47-213ENST00000617596 LMTK2Q8IWU2 1503 aa23.56■■□□□ 1.36
SNAP47-213ENST00000617596 EFCAB6Q5THR3 1501 aa23.55■■□□□ 1.36
SNAP47-213ENST00000617596 NPATQ14207 1427 aa23.53■■□□□ 1.36
SNAP47-213ENST00000617596 RPRD2Q5VT52 1461 aaKnown RBP23.51■■□□□ 1.35
SNAP47-213ENST00000617596 TONSLQ96HA7 1378 aa23.5■■□□□ 1.35
SNAP47-213ENST00000617596 CAMSAP1Q5T5Y3 1602 aa23.5■■□□□ 1.35
SNAP47-213ENST00000617596 CCDC144AA2RUR9 1427 aa23.49■■□□□ 1.35
SNAP47-213ENST00000617596 PPP6R1Q9UPN7 881 aa23.48■■□□□ 1.35
SNAP47-213ENST00000617596 ESF1Q9H501 851 aaKnown RBP23.47■■□□□ 1.35
SNAP47-213ENST00000617596 CLTCQ00610 1675 aaKnown RBP23.47■■□□□ 1.35
SNAP47-213ENST00000617596 ZC3H13Q5T200 1668 aaKnown RBP23.47■■□□□ 1.35
SNAP47-213ENST00000617596 PTPRTO14522 1441 aa23.47■■□□□ 1.35
SNAP47-213ENST00000617596 CFAP65Q6ZU64 1925 aaKnown RBP23.46■■□□□ 1.35
SNAP47-213ENST00000617596 FBXO31Q5XUX0 539 aaPredicted RBP23.46■■□□□ 1.35
SNAP47-213ENST00000617596 L3MBTL2Q969R5 705 aa23.45■■□□□ 1.35
SNAP47-213ENST00000617596 UGGT1Q9NYU2 1555 aa23.44■■□□□ 1.34
SNAP47-213ENST00000617596 SPHKAPQ2M3C7 1700 aa23.44■■□□□ 1.34
SNAP47-213ENST00000617596 TRPM2O94759 1503 aa23.43■■□□□ 1.34
SNAP47-213ENST00000617596 SCAF1Q9H7N4 1312 aaKnown RBP23.43■■□□□ 1.34
SNAP47-213ENST00000617596 ARHGAP31Q2M1Z3 1444 aa23.42■■□□□ 1.34
SNAP47-213ENST00000617596 RGL3Q3MIN7 710 aa23.42■■□□□ 1.34
SNAP47-213ENST00000617596 TIMELESSQ9UNS1 1208 aa23.41■■□□□ 1.34
SNAP47-213ENST00000617596 ZMYM3Q14202 1370 aa23.41■■□□□ 1.34
SNAP47-213ENST00000617596 PLPPR3Q6T4P5 718 aa23.39■■□□□ 1.34
SNAP47-213ENST00000617596 PPP1R15AO75807 674 aaPredicted RBP23.39■■□□□ 1.33
SNAP47-213ENST00000617596 CLTCL1P53675 1640 aa23.39■■□□□ 1.33
SNAP47-213ENST00000617596 NOS1P29475 1434 aa23.38■■□□□ 1.33
SNAP47-213ENST00000617596 CEBPAP49715 358 aaPredicted RBP23.37■■□□□ 1.33
SNAP47-213ENST00000617596 CNTLNQ9NXG0 1405 aa23.36■■□□□ 1.33
SNAP47-213ENST00000617596 SYNMO15061 1565 aa23.35■■□□□ 1.33
SNAP47-213ENST00000617596 CHGAP10645 457 aaKnown RBP23.34■■□□□ 1.33
SNAP47-213ENST00000617596 ERVK-7P63135 1459 aa23.34■■□□□ 1.33
SNAP47-213ENST00000617596 KDM2AQ9Y2K7 1162 aa23.33■■□□□ 1.33
SNAP47-213ENST00000617596 PREX1Q8TCU6 1659 aa23.33■■□□□ 1.32
SNAP47-213ENST00000617596 DCAF11Q8TEB1 546 aa23.32■■□□□ 1.32
SNAP47-213ENST00000617596 IDI1Q13907 227 aa23.31■■□□□ 1.32
SNAP47-213ENST00000617596 FER1L4A9Z1Z3 1794 aa23.31■■□□□ 1.32
SNAP47-213ENST00000617596 ZNF326Q5BKZ1 582 aaKnown RBP23.31■■□□□ 1.32
SNAP47-213ENST00000617596 SPATA31E1Q6ZUB1 1445 aa23.31■■□□□ 1.32
SNAP47-213ENST00000617596 MADDQ8WXG6 1647 aa23.29■■□□□ 1.32
SNAP47-213ENST00000617596 NBPF8Q3BBV2 869 aa23.28■■□□□ 1.32
SNAP47-213ENST00000617596 SLC52A1Q9NWF4 448 aa23.26■■□□□ 1.31
SNAP47-213ENST00000617596 SPATA31D1Q6ZQQ2 1576 aa23.26■■□□□ 1.31
SNAP47-213ENST00000617596 MROH2AA6NES4 1674 aa23.24■■□□□ 1.31
SNAP47-213ENST00000617596 PIK3C2BO00750 1634 aa23.24■■□□□ 1.31
SNAP47-213ENST00000617596 ADAMTSL3P82987 1691 aa23.23■■□□□ 1.31
SNAP47-213ENST00000617596 RIMS1Q86UR5 1692 aaKnown RBP23.23■■□□□ 1.31
SNAP47-213ENST00000617596 C3P01024 1663 aa23.22■■□□□ 1.31
SNAP47-213ENST00000617596 TNRQ92752 1358 aa23.22■■□□□ 1.31
SNAP47-213ENST00000617596 KIF1BO60333 1816 aa23.21■■□□□ 1.31
SNAP47-213ENST00000617596 ADGRB3O60242 1522 aa23.2■■□□□ 1.3
SNAP47-213ENST00000617596 NUTM2DQ5VT03 806 aaPredicted RBP23.19■■□□□ 1.3
SNAP47-213ENST00000617596 STAG3Q9UJ98 1225 aa23.19■■□□□ 1.3
SNAP47-213ENST00000617596 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.3
SNAP47-213ENST00000617596 TMEM131LA2VDJ0 1609 aa23.14■■□□□ 1.29
SNAP47-213ENST00000617596 NEURL4Q96JN8 1562 aa23.14■■□□□ 1.29
SNAP47-213ENST00000617596 UHRF1BP1Q6BDS2 1440 aa23.14■■□□□ 1.29
SNAP47-213ENST00000617596 PRAG1Q86YV5 1406 aa23.13■■□□□ 1.29
SNAP47-213ENST00000617596 ADGRF5Q8IZF2 1346 aa23.13■■□□□ 1.29
SNAP47-213ENST00000617596 MYO5BQ9ULV0 1848 aa23.11■■□□□ 1.29
SNAP47-213ENST00000617596 HIRIP3Q9BW71 556 aaPredicted RBP23.11■■□□□ 1.29
SNAP47-213ENST00000617596 A2ML1A8K2U0 1454 aa23.1■■□□□ 1.29
SNAP47-213ENST00000617596 PTPRMP28827 1452 aa23.08■■□□□ 1.29
SNAP47-213ENST00000617596 NBPF1Q3BBV0 1214 aa23.08■■□□□ 1.28
SNAP47-213ENST00000617596 RPGRIP1LQ68CZ1 1315 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms