RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 NISCHQ9Y2I1 1504 aa37.66■■■■□ 3.62
SNAP47-213ENST00000617596 CCDC180Q9P1Z9 1646 aa32.92■■■□□ 2.86
SNAP47-213ENST00000617596 ABCC9O60706 1549 aa31.71■■■□□ 2.67
SNAP47-213ENST00000617596 ZCCHC6Q5VYS8 1495 aaKnown RBP31.53■■■□□ 2.64
SNAP47-213ENST00000617596 DCAF8L2P0C7V8 631 aa31.43■■■□□ 2.62
SNAP47-213ENST00000617596 DCAF1Q9Y4B6 1507 aa31.03■■■□□ 2.56
SNAP47-213ENST00000617596 MYO15BQ96JP2 1530 aa30.81■■■□□ 2.52
SNAP47-213ENST00000617596 NACADO15069 1562 aa30.8■■■□□ 2.52
SNAP47-213ENST00000617596 RB1CC1Q8TDY2 1594 aa30.66■■■□□ 2.5
SNAP47-213ENST00000617596 SHROOM4Q9ULL8 1493 aa30.61■■■□□ 2.49
SNAP47-213ENST00000617596 SCRIBQ14160 1630 aa30.37■■■□□ 2.45
SNAP47-213ENST00000617596 UNC13AQ9UPW8 1703 aa30.02■■■□□ 2.4
SNAP47-213ENST00000617596 PABPN1Q86U42 306 aaKnown RBP eCLIP29.89■■■□□ 2.38
SNAP47-213ENST00000617596 BICRAQ9NZM4 1560 aa29.78■■■□□ 2.36
SNAP47-213ENST00000617596 CECR2Q9BXF3 1484 aa29.38■■■□□ 2.29
SNAP47-213ENST00000617596 SUPT5HO00267 1087 aaKnown RBP29.23■■■□□ 2.27
SNAP47-213ENST00000617596 MROH2BQ7Z745 1585 aa29.13■■■□□ 2.25
SNAP47-213ENST00000617596 RSF1Q96T23 1441 aaPredicted RBP29.09■■■□□ 2.25
SNAP47-213ENST00000617596 BAZ1AQ9NRL2 1556 aaPredicted RBP29.08■■■□□ 2.25
SNAP47-213ENST00000617596 SMARCA4P51532 1647 aa29.02■■■□□ 2.24
SNAP47-213ENST00000617596 EIF4G1Q04637 1599 aaKnown RBP28.93■■■□□ 2.22
SNAP47-213ENST00000617596 WIZO95785 1651 aa28.85■■■□□ 2.21
SNAP47-213ENST00000617596 ATAD2BQ9ULI0 1458 aa28.68■■■□□ 2.18
SNAP47-213ENST00000617596 PEG3Q9GZU2 1588 aa28.63■■■□□ 2.17
SNAP47-213ENST00000617596 CC2D2AQ9P2K1 1620 aa28.62■■■□□ 2.17
SNAP47-213ENST00000617596 SMARCA2P51531 1590 aa28.59■■■□□ 2.17
SNAP47-213ENST00000617596 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
SNAP47-213ENST00000617596 TOP2AP11388 1531 aaKnown RBP28.49■■■□□ 2.15
SNAP47-213ENST00000617596 NCAPD3P42695 1498 aa28.47■■■□□ 2.15
SNAP47-213ENST00000617596 DNAJC5BQ9UF47 199 aa28.42■■■□□ 2.14
SNAP47-213ENST00000617596 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
SNAP47-213ENST00000617596 CCDC88BA6NC98 1476 aa28.25■■■□□ 2.11
SNAP47-213ENST00000617596 CADPSQ9ULU8 1353 aa27.75■■■□□ 2.03
SNAP47-213ENST00000617596 CFTRP13569 1480 aa27.74■■■□□ 2.03
SNAP47-213ENST00000617596 NESP48681 1621 aa27.71■■■□□ 2.03
SNAP47-213ENST00000617596 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
SNAP47-213ENST00000617596 ABCC8Q09428 1581 aa27.56■■■□□ 2
SNAP47-213ENST00000617596 LAMC3Q9Y6N6 1575 aa27.54■■■□□ 2
SNAP47-213ENST00000617596 FANCD2Q9BXW9 1451 aa27.45■■□□□ 1.99
SNAP47-213ENST00000617596 PRDM2Q13029 1718 aa27.45■■□□□ 1.98
SNAP47-213ENST00000617596 TRIM41Q8WV44 630 aa27.45■■□□□ 1.98
SNAP47-213ENST00000617596 WRNQ14191 1432 aaPredicted RBP eCLIP27.38■■□□□ 1.97
SNAP47-213ENST00000617596 PDS5BQ9NTI5 1447 aa27.38■■□□□ 1.97
SNAP47-213ENST00000617596 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
SNAP47-213ENST00000617596 SYNJ1O43426 1573 aa27.3■■□□□ 1.96
SNAP47-213ENST00000617596 KIF21AQ7Z4S6 1674 aa27.29■■□□□ 1.96
SNAP47-213ENST00000617596 CUX1P39880 1505 aa27.24■■□□□ 1.95
SNAP47-213ENST00000617596 ERCC6Q03468 1493 aa27.2■■□□□ 1.94
SNAP47-213ENST00000617596 TOP2BQ02880 1626 aa27.16■■□□□ 1.94
SNAP47-213ENST00000617596 URB2Q14146 1524 aaKnown RBP27.15■■□□□ 1.94
SNAP47-213ENST00000617596 BIVM-ERCC5R4GMW8 1640 aa27.11■■□□□ 1.93
SNAP47-213ENST00000617596 TOPBP1Q92547 1522 aa27.1■■□□□ 1.93
SNAP47-213ENST00000617596 DNMBPQ6XZF7 1577 aa27.08■■□□□ 1.93
SNAP47-213ENST00000617596 MRC2Q9UBG0 1479 aa27.06■■□□□ 1.92
SNAP47-213ENST00000617596 FAM9AQ8IZU1 332 aaPredicted RBP27.03■■□□□ 1.92
SNAP47-213ENST00000617596 FGD5Q6ZNL6 1462 aa27.02■■□□□ 1.92
SNAP47-213ENST00000617596 SOGA1O94964 1423 aa26.98■■□□□ 1.91
SNAP47-213ENST00000617596 POLA1P09884 1462 aaPredicted RBP26.95■■□□□ 1.9
SNAP47-213ENST00000617596 THOC2Q8NI27 1593 aaKnown RBP26.94■■□□□ 1.9
SNAP47-213ENST00000617596 WDR62O43379 1518 aa26.92■■□□□ 1.9
SNAP47-213ENST00000617596 RUSC2Q8N2Y8 1516 aa26.91■■□□□ 1.9
SNAP47-213ENST00000617596 RAD54L2Q9Y4B4 1467 aa26.91■■□□□ 1.9
SNAP47-213ENST00000617596 CUX2O14529 1486 aa26.79■■□□□ 1.88
SNAP47-213ENST00000617596 EHMT2Q96KQ7 1210 aa26.75■■□□□ 1.87
SNAP47-213ENST00000617596 ABCA10Q8WWZ4 1543 aa26.72■■□□□ 1.87
SNAP47-213ENST00000617596 KIF27Q86VH2 1401 aa26.71■■□□□ 1.87
SNAP47-213ENST00000617596 TDRD9Q8NDG6 1382 aaKnown RBP26.7■■□□□ 1.87
SNAP47-213ENST00000617596 TARBP1Q13395 1621 aaKnown RBP26.7■■□□□ 1.86
SNAP47-213ENST00000617596 LOC105371045A0A1W2PR82 267 aa26.7■■□□□ 1.86
SNAP47-213ENST00000617596 CSRNP3Q8WYN3 585 aa26.69■■□□□ 1.86
SNAP47-213ENST00000617596 EEA1Q15075 1411 aa26.67■■□□□ 1.86
SNAP47-213ENST00000617596 IFT140Q96RY7 1462 aa26.66■■□□□ 1.86
SNAP47-213ENST00000617596 WDR97A6NE52 1622 aa26.63■■□□□ 1.85
SNAP47-213ENST00000617596 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
SNAP47-213ENST00000617596 AQRO60306 1485 aaKnown RBP eCLIP26.59■■□□□ 1.853e-7■■■■■ 38.1
SNAP47-213ENST00000617596 IGF1RP08069 1367 aa26.56■■□□□ 1.84
SNAP47-213ENST00000617596 GAPVD1Q14C86 1478 aa26.54■■□□□ 1.84
SNAP47-213ENST00000617596 ABCA5Q8WWZ7 1642 aa26.53■■□□□ 1.84
SNAP47-213ENST00000617596 EIF4G3O43432 1585 aaKnown RBP26.44■■□□□ 1.82
SNAP47-213ENST00000617596 PRXQ9BXM0 1461 aa26.42■■□□□ 1.82
SNAP47-213ENST00000617596 RAPGEF2Q9Y4G8 1499 aa26.42■■□□□ 1.82
SNAP47-213ENST00000617596 CARMIL1Q5VZK9 1371 aa26.41■■□□□ 1.82
SNAP47-213ENST00000617596 GRIN2BQ13224 1484 aa26.38■■□□□ 1.81
SNAP47-213ENST00000617596 ERICH3Q5RHP9 1530 aa26.38■■□□□ 1.81
SNAP47-213ENST00000617596 KIF21BO75037 1637 aa26.37■■□□□ 1.81
SNAP47-213ENST00000617596 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
SNAP47-213ENST00000617596 UBTFP17480 764 aaKnown RBP26.36■■□□□ 1.81
SNAP47-213ENST00000617596 GOLGA3Q08378 1498 aa26.35■■□□□ 1.81
SNAP47-213ENST00000617596 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
SNAP47-213ENST00000617596 CUL7Q14999 1698 aa26.28■■□□□ 1.8
SNAP47-213ENST00000617596 FHAD1B1AJZ9 1412 aa26.23■■□□□ 1.79
SNAP47-213ENST00000617596 ADAMTS12P58397 1594 aa26.22■■□□□ 1.79
SNAP47-213ENST00000617596 FBLN2P98095 1184 aa26.2■■□□□ 1.78
SNAP47-213ENST00000617596 TNIKQ9UKE5 1360 aa26.19■■□□□ 1.78
SNAP47-213ENST00000617596 RANGAP1P46060 587 aaPredicted RBP26.18■■□□□ 1.78
SNAP47-213ENST00000617596 MAGI1Q96QZ7 1491 aaPredicted RBP26.18■■□□□ 1.78
SNAP47-213ENST00000617596 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.78
SNAP47-213ENST00000617596 SYNJ2O15056 1496 aa26.11■■□□□ 1.77
SNAP47-213ENST00000617596 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
SNAP47-213ENST00000617596 CEP162Q5TB80 1403 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms