RNA–Protein interactions for RNA: ENST00000616683.4

RAD17-220, Transcript of RAD17 checkpoint clamp loader component, humanhuman

TSL 1 (best) BASIC

Gene RAD17, Length 3,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD17-220ENST00000616683 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.12□□□□□ -1.27
RAD17-220ENST00000616683 CWC22Q9HCG8 908 aaKnown RBP7.12□□□□□ -1.27
RAD17-220ENST00000616683 ARHGEF11O15085 1522 aa7.12□□□□□ -1.27
RAD17-220ENST00000616683 IRF6O14896 467 aa7.12□□□□□ -1.27
RAD17-220ENST00000616683 ZNF608Q9ULD9 1512 aaPredicted RBP7.12□□□□□ -1.27
RAD17-220ENST00000616683 RAI14Q9P0K7 980 aa7.12□□□□□ -1.27
RAD17-220ENST00000616683 IRX5P78411 483 aaPredicted RBP7.11□□□□□ -1.27
RAD17-220ENST00000616683 SEMA3FQ13275 785 aa7.1□□□□□ -1.27
RAD17-220ENST00000616683 CCDC94Q9BW85 323 aaPredicted RBP7.1□□□□□ -1.27
RAD17-220ENST00000616683 NBPF10Q6P3W6 841 aaKnown RBP7.1□□□□□ -1.27
RAD17-220ENST00000616683 PLEKHD1A6NEE1 506 aa7.09□□□□□ -1.27
RAD17-220ENST00000616683 BSDC1Q9NW68 430 aaPredicted RBP7.09□□□□□ -1.27
RAD17-220ENST00000616683 ESPNB1AK53 854 aa7.09□□□□□ -1.27
RAD17-220ENST00000616683 OTUD6BQ8N6M0 293 aa7.09□□□□□ -1.27
RAD17-220ENST00000616683 SATB1Q01826 763 aa7.09□□□□□ -1.28
RAD17-220ENST00000616683 CFAP65Q6ZU64 1925 aaKnown RBP7.09□□□□□ -1.28
RAD17-220ENST00000616683 FAM69CQ0P6D2 419 aa7.08□□□□□ -1.28
RAD17-220ENST00000616683 EFCC1Q9HA90 598 aa7.08□□□□□ -1.28
RAD17-220ENST00000616683 E9PSI1 815 aa7.07□□□□□ -1.28
RAD17-220ENST00000616683 TSPYL1Q9H0U9 437 aa7.07□□□□□ -1.28
RAD17-220ENST00000616683 SOCS7O14512 581 aa7.07□□□□□ -1.28
RAD17-220ENST00000616683 CCDC27Q2M243 656 aa7.07□□□□□ -1.28
RAD17-220ENST00000616683 KCNH8Q96L42 1107 aa7.07□□□□□ -1.28
RAD17-220ENST00000616683 ZBED9Q6R2W3 1325 aa7.07□□□□□ -1.28
RAD17-220ENST00000616683 MAP2K1Q02750 393 aaPredicted RBP7.07□□□□□ -1.28
RAD17-220ENST00000616683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.07□□□□□ -1.28
RAD17-220ENST00000616683 WDR62O43379 1518 aa7.06□□□□□ -1.28
RAD17-220ENST00000616683 FSD2A1L4K1 749 aa7.06□□□□□ -1.28
RAD17-220ENST00000616683 TULP2O00295 520 aa7.06□□□□□ -1.28
RAD17-220ENST00000616683 WIZO95785 1651 aa7.06□□□□□ -1.28
RAD17-220ENST00000616683 CASC1Q6TDU7 716 aa7.06□□□□□ -1.28
RAD17-220ENST00000616683 KIAA1211Q6ZU35 1233 aa7.06□□□□□ -1.28
RAD17-220ENST00000616683 ZNF526Q8TF50 670 aaPredicted RBP7.06□□□□□ -1.28
RAD17-220ENST00000616683 PEG3Q9GZU2 1588 aa7.06□□□□□ -1.28
RAD17-220ENST00000616683 PRR29P0C7W0 189 aa7.05□□□□□ -1.28
RAD17-220ENST00000616683 ZNF500O60304 480 aaPredicted RBP7.05□□□□□ -1.28
RAD17-220ENST00000616683 OFD1O75665 1012 aa7.05□□□□□ -1.28
RAD17-220ENST00000616683 ZKSCAN8Q15776 578 aaPredicted RBP7.05□□□□□ -1.28
RAD17-220ENST00000616683 TMTC2Q8N394 836 aa7.05□□□□□ -1.28
RAD17-220ENST00000616683 BANK1Q8NDB2 785 aa7.05□□□□□ -1.28
RAD17-220ENST00000616683 URB2Q14146 1524 aaKnown RBP7.05□□□□□ -1.28
RAD17-220ENST00000616683 CDCA8Q53HL2 280 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 MKL1Q969V6 931 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 TERF2IPQ9NYB0 399 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 KDM2AQ9Y2K7 1162 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 DYNC1I1O14576 645 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 LMOD3Q0VAK6 560 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 CCDC96Q2M329 555 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 HSP90AB4PQ58FF6 505 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 NBPF6Q5VWK0 638 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 TSHZ1Q6ZSZ6 1077 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 NBPF5PQ86XG9 351 aaPredicted RBP7.04□□□□□ -1.28
RAD17-220ENST00000616683 NBPF4Q96M43 638 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 LMTK3Q96Q04 1460 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 CEP83Q9Y592 693 aa7.04□□□□□ -1.28
RAD17-220ENST00000616683 ZBTB22O15209 634 aa7.03□□□□□ -1.28
RAD17-220ENST00000616683 P3H3Q8IVL6 736 aa7.03□□□□□ -1.28
RAD17-220ENST00000616683 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.03□□□□□ -1.28
RAD17-220ENST00000616683 IGF1RP08069 1367 aa7.02□□□□□ -1.28
RAD17-220ENST00000616683 PHLDB1Q86UU1 1377 aa7.02□□□□□ -1.28
RAD17-220ENST00000616683 MS4A1P11836 297 aa7.02□□□□□ -1.29
RAD17-220ENST00000616683 BRPF1P55201 1214 aaPredicted RBP7.02□□□□□ -1.29
RAD17-220ENST00000616683 RBM28Q9NW13 759 aaKnown RBP7.02□□□□□ -1.29
RAD17-220ENST00000616683 ARAP1Q96P48 1450 aa7.01□□□□□ -1.29
RAD17-220ENST00000616683 IFT140Q96RY7 1462 aa7.01□□□□□ -1.29
RAD17-220ENST00000616683 ERBB4Q15303 1308 aa7.01□□□□□ -1.29
RAD17-220ENST00000616683 GOLIM4O00461 696 aa7.01□□□□□ -1.29
RAD17-220ENST00000616683 XRCC6P12956 609 aaKnown RBP eCLIP7.01□□□□□ -1.29
RAD17-220ENST00000616683 AEBP1Q8IUX7 1158 aa7.01□□□□□ -1.29
RAD17-220ENST00000616683 RNF217Q8TC41 542 aa7.01□□□□□ -1.29
RAD17-220ENST00000616683 SIRT1Q96EB6 747 aa7.01□□□□□ -1.29
RAD17-220ENST00000616683 BORCS6Q96GS4 357 aa7.01□□□□□ -1.29
RAD17-220ENST00000616683 ISY1Q9ULR0 285 aaKnown RBP7.01□□□□□ -1.29
RAD17-220ENST00000616683 SOGA1O94964 1423 aa7□□□□□ -1.29
RAD17-220ENST00000616683 RAD54L2Q9Y4B4 1467 aa7□□□□□ -1.29
RAD17-220ENST00000616683 ANKRD23Q86SG2 305 aa7□□□□□ -1.29
RAD17-220ENST00000616683 MYCBPQ99417 103 aaPredicted RBP7□□□□□ -1.29
RAD17-220ENST00000616683 CGNQ9P2M7 1197 aaKnown RBP7□□□□□ -1.29
RAD17-220ENST00000616683 KIF16BQ96L93 1317 aa7□□□□□ -1.29
RAD17-220ENST00000616683 CFTRP13569 1480 aa7□□□□□ -1.29
RAD17-220ENST00000616683 SSR1P43307 286 aaKnown RBP7□□□□□ -1.29
RAD17-220ENST00000616683 MTA1Q13330 715 aa7□□□□□ -1.29
RAD17-220ENST00000616683 SETDB1Q15047 1291 aa7□□□□□ -1.29
RAD17-220ENST00000616683 RAD50Q92878 1312 aa7□□□□□ -1.29
RAD17-220ENST00000616683 CCDC172P0C7W6 258 aa6.99□□□□□ -1.29
RAD17-220ENST00000616683 CT47A1Q5JQC4 288 aaPredicted RBP6.99□□□□□ -1.29
RAD17-220ENST00000616683 RINLQ6ZS11 566 aa6.99□□□□□ -1.29
RAD17-220ENST00000616683 FAM177A1Q8N128 213 aaPredicted RBP6.99□□□□□ -1.29
RAD17-220ENST00000616683 CHMP4CQ96CF2 233 aa6.99□□□□□ -1.29
RAD17-220ENST00000616683 LOC102724159A0A0B4J2E5 919 aa6.99□□□□□ -1.29
RAD17-220ENST00000616683 PWP2Q15269 919 aaKnown RBP6.99□□□□□ -1.29
RAD17-220ENST00000616683 NECTIN2Q92692 538 aa6.99□□□□□ -1.29
RAD17-220ENST00000616683 NCAPGQ9BPX3 1015 aa6.99□□□□□ -1.29
RAD17-220ENST00000616683 ARID4AP29374 1257 aaPredicted RBP6.99□□□□□ -1.29
RAD17-220ENST00000616683 EXOC8Q8IYI6 725 aa6.99□□□□□ -1.29
RAD17-220ENST00000616683 MPNDQ8N594 471 aa6.99□□□□□ -1.29
RAD17-220ENST00000616683 TMC1Q8TDI8 760 aa6.99□□□□□ -1.29
RAD17-220ENST00000616683 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.99□□□□□ -1.29
RAD17-220ENST00000616683 B4GALNT3Q6L9W6 998 aa6.98□□□□□ -1.29
RAD17-220ENST00000616683 FAM13BQ9NYF5 915 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms