RNA–Protein interactions for RNA: ENST00000616683.4

RAD17-220, Transcript of RAD17 checkpoint clamp loader component, humanhuman

TSL 1 (best) BASIC

Gene RAD17, Length 3,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD17-220ENST00000616683 PELP1Q8IZL8 1130 aaKnown RBP10.37□□□□□ -0.75
RAD17-220ENST00000616683 MYT1Q01538 1121 aa10.33□□□□□ -0.76
RAD17-220ENST00000616683 TTBK1Q5TCY1 1321 aaPredicted RBP10.09□□□□□ -0.79
RAD17-220ENST00000616683 SLC24A1O60721 1099 aa9.77□□□□□ -0.85
RAD17-220ENST00000616683 PRKCSHP14314 528 aaPredicted RBP9.66□□□□□ -0.86
RAD17-220ENST00000616683 APLP2Q06481 763 aa9.63□□□□□ -0.87
RAD17-220ENST00000616683 ERICH6Q7L0X2 663 aa9.55□□□□□ -0.88
RAD17-220ENST00000616683 DAXXQ9UER7 740 aaPredicted RBP9.35□□□□□ -0.91
RAD17-220ENST00000616683 BCL11AQ9H165 835 aa9.24□□□□□ -0.93
RAD17-220ENST00000616683 NISCHQ9Y2I1 1504 aa9.21□□□□□ -0.94
RAD17-220ENST00000616683 HRCP23327 699 aa9.2□□□□□ -0.94
RAD17-220ENST00000616683 FAM9AQ8IZU1 332 aaPredicted RBP9.1□□□□□ -0.95
RAD17-220ENST00000616683 SCAF1Q9H7N4 1312 aaKnown RBP9.1□□□□□ -0.95
RAD17-220ENST00000616683 ABCC9O60706 1549 aa8.93□□□□□ -0.98
RAD17-220ENST00000616683 EIF5BO60841 1220 aaKnown RBP8.91□□□□□ -0.98
RAD17-220ENST00000616683 CENPBP07199 599 aaPredicted RBP8.87□□□□□ -0.99
RAD17-220ENST00000616683 DCAF8L2P0C7V8 631 aa8.78□□□□□ -1
RAD17-220ENST00000616683 UBE2Q2Q8WVN8 375 aa8.73□□□□□ -1.01
RAD17-220ENST00000616683 NCBP3Q53F19 620 aaKnown RBP8.71□□□□□ -1.01
RAD17-220ENST00000616683 ANP32EQ9BTT0 268 aa8.69□□□□□ -1.02
RAD17-220ENST00000616683 PPARGC1BQ86YN6 1023 aaKnown RBP8.67□□□□□ -1.02
RAD17-220ENST00000616683 ACIN1Q9UKV3 1341 aaKnown RBP8.66□□□□□ -1.02
RAD17-220ENST00000616683 PLEKHG5O94827 1062 aa8.62□□□□□ -1.03
RAD17-220ENST00000616683 DNAJC5Q9H3Z4 198 aa8.61□□□□□ -1.03
RAD17-220ENST00000616683 DNAJC5BQ9UF47 199 aa8.58□□□□□ -1.04
RAD17-220ENST00000616683 ARXQ96QS3 562 aa8.58□□□□□ -1.04
RAD17-220ENST00000616683 PODXL2Q9NZ53 605 aa8.52□□□□□ -1.04
RAD17-220ENST00000616683 CSRNP3Q8WYN3 585 aa8.52□□□□□ -1.05
RAD17-220ENST00000616683 GTF3C3Q9Y5Q9 886 aa8.51□□□□□ -1.05
RAD17-220ENST00000616683 PABPN1Q86U42 306 aaKnown RBP eCLIP8.49□□□□□ -1.05
RAD17-220ENST00000616683 NEUROD1Q13562 356 aa8.49□□□□□ -1.05
RAD17-220ENST00000616683 ZEB1P37275 1124 aaPredicted RBP8.48□□□□□ -1.05
RAD17-220ENST00000616683 ANO8Q9HCE9 1232 aaPredicted RBP8.47□□□□□ -1.05
RAD17-220ENST00000616683 PKNOX2Q96KN3 472 aa8.45□□□□□ -1.06
RAD17-220ENST00000616683 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
RAD17-220ENST00000616683 ERICH6BQ5W0A0 696 aa8.38□□□□□ -1.07
RAD17-220ENST00000616683 KLHL34Q8N239 644 aa8.36□□□□□ -1.07
RAD17-220ENST00000616683 CCDC180Q9P1Z9 1646 aa8.33□□□□□ -1.08
RAD17-220ENST00000616683 PCGF6Q9BYE7 350 aa8.31□□□□□ -1.08
RAD17-220ENST00000616683 NEFLP07196 543 aa8.3□□□□□ -1.08
RAD17-220ENST00000616683 MYT1LQ9UL68 1186 aa8.29□□□□□ -1.08
RAD17-220ENST00000616683 PDIA4P13667 645 aaKnown RBP8.28□□□□□ -1.08
RAD17-220ENST00000616683 TIMELESSQ9UNS1 1208 aa8.28□□□□□ -1.08
RAD17-220ENST00000616683 DCAF1Q9Y4B6 1507 aa8.27□□□□□ -1.09
RAD17-220ENST00000616683 MYO15BQ96JP2 1530 aa8.26□□□□□ -1.09
RAD17-220ENST00000616683 RTN4Q9NQC3 1192 aaKnown RBP8.26□□□□□ -1.09
RAD17-220ENST00000616683 SALL2Q9Y467 1007 aaPredicted RBP8.25□□□□□ -1.09
RAD17-220ENST00000616683 CLSPNQ9HAW4 1339 aa8.23□□□□□ -1.09
RAD17-220ENST00000616683 PDE4CQ08493 712 aa8.23□□□□□ -1.09
RAD17-220ENST00000616683 PLPPR3Q6T4P5 718 aa8.21□□□□□ -1.09
RAD17-220ENST00000616683 HOMEZQ8IX15 550 aa8.21□□□□□ -1.1
RAD17-220ENST00000616683 TSHZ2Q9NRE2 1034 aa8.2□□□□□ -1.1
RAD17-220ENST00000616683 FGD1P98174 961 aa8.18□□□□□ -1.1
RAD17-220ENST00000616683 TAF7LQ5H9L4 462 aa8.13□□□□□ -1.11
RAD17-220ENST00000616683 CCDC136Q96JN2 1154 aa8.11□□□□□ -1.11
RAD17-220ENST00000616683 TRIM26Q12899 539 aaPredicted RBP8.1□□□□□ -1.11
RAD17-220ENST00000616683 RB1CC1Q8TDY2 1594 aa8.08□□□□□ -1.12
RAD17-220ENST00000616683 AAMPQ13685 434 aa8.08□□□□□ -1.12
RAD17-220ENST00000616683 TULP1O00294 542 aaPredicted RBP8.06□□□□□ -1.12
RAD17-220ENST00000616683 BCL11BQ9C0K0 894 aaPredicted RBP8.05□□□□□ -1.12
RAD17-220ENST00000616683 AMER1Q5JTC6 1135 aaPredicted RBP8.04□□□□□ -1.12
RAD17-220ENST00000616683 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
RAD17-220ENST00000616683 DEKP35659 375 aaKnown RBP8.02□□□□□ -1.13
RAD17-220ENST00000616683 TRIM41Q8WV44 630 aa8.01□□□□□ -1.13
RAD17-220ENST00000616683 GLIPR1L2Q4G1C9 344 aa8.01□□□□□ -1.13
RAD17-220ENST00000616683 AEBP2Q6ZN18 517 aaPredicted RBP8.01□□□□□ -1.13
RAD17-220ENST00000616683 EHMT2Q96KQ7 1210 aa8.01□□□□□ -1.13
RAD17-220ENST00000616683 RSPH4AQ5TD94 716 aa7.99□□□□□ -1.13
RAD17-220ENST00000616683 BRD2P25440 801 aaKnown RBP7.99□□□□□ -1.13
RAD17-220ENST00000616683 ZMYND15Q9H091 742 aa7.99□□□□□ -1.13
RAD17-220ENST00000616683 NPM2Q86SE8 214 aaKnown RBP7.98□□□□□ -1.13
RAD17-220ENST00000616683 SUPT16HQ9Y5B9 1047 aaKnown RBP7.98□□□□□ -1.13
RAD17-220ENST00000616683 CECR2Q9BXF3 1484 aa7.97□□□□□ -1.13
RAD17-220ENST00000616683 RBM10P98175 930 aaKnown RBP7.97□□□□□ -1.13
RAD17-220ENST00000616683 DIEXFQ68CQ4 756 aaKnown RBP7.94□□□□□ -1.14
RAD17-220ENST00000616683 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.94□□□□□ -1.14
RAD17-220ENST00000616683 CHMP4AQ9BY43 222 aa7.94□□□□□ -1.14
RAD17-220ENST00000616683 FANCIQ9NVI1 1328 aa7.93□□□□□ -1.14
RAD17-220ENST00000616683 ZNF326Q5BKZ1 582 aaKnown RBP7.92□□□□□ -1.14
RAD17-220ENST00000616683 MSH5O43196 834 aa7.92□□□□□ -1.14
RAD17-220ENST00000616683 FBXO3Q9UK99 471 aa7.92□□□□□ -1.14
RAD17-220ENST00000616683 SAMD1Q6SPF0 538 aaPredicted RBP7.91□□□□□ -1.14
RAD17-220ENST00000616683 A0A0U1RQG5 324 aaPredicted RBP7.89□□□□□ -1.15
RAD17-220ENST00000616683 TAOK2Q9UL54 1235 aa7.89□□□□□ -1.15
RAD17-220ENST00000616683 CNKSR2Q8WXI2 1034 aa7.89□□□□□ -1.15
RAD17-220ENST00000616683 NACADO15069 1562 aa7.88□□□□□ -1.15
RAD17-220ENST00000616683 RBM19Q9Y4C8 960 aaKnown RBP7.88□□□□□ -1.15
RAD17-220ENST00000616683 LOC105371045A0A1W2PR82 267 aa7.88□□□□□ -1.15
RAD17-220ENST00000616683 C11orf95C9JLR9 678 aaPredicted RBP7.84□□□□□ -1.15
RAD17-220ENST00000616683 DHX37Q8IY37 1157 aaKnown RBP7.84□□□□□ -1.15
RAD17-220ENST00000616683 VSIG10Q8N0Z9 540 aa7.83□□□□□ -1.16
RAD17-220ENST00000616683 CDK11AQ9UQ88 783 aaPredicted RBP7.83□□□□□ -1.16
RAD17-220ENST00000616683 C14orf37Q86TY3 774 aa7.82□□□□□ -1.16
RAD17-220ENST00000616683 IL27Q8NEV9 243 aa7.82□□□□□ -1.16
RAD17-220ENST00000616683 BCCIPQ9P287 314 aaKnown RBP eCLIP7.81□□□□□ -1.16
RAD17-220ENST00000616683 ERCC6Q03468 1493 aa7.8□□□□□ -1.16
RAD17-220ENST00000616683 CC2D2AQ9P2K1 1620 aa7.79□□□□□ -1.16
RAD17-220ENST00000616683 PAXIP1Q6ZW49 1069 aaPredicted RBP7.79□□□□□ -1.16
RAD17-220ENST00000616683 UNC13AQ9UPW8 1703 aa7.79□□□□□ -1.16
RAD17-220ENST00000616683 SCRIBQ14160 1630 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms