RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 KDM5DQ9BY66 1539 aa27.65■■■□□ 2.02
CHTOP-207ENST00000614256 ATP10AO60312 1499 aa27.63■■■□□ 2.01
CHTOP-207ENST00000614256 MROH1Q8NDA8 1641 aa27.63■■■□□ 2.01
CHTOP-207ENST00000614256 NUP155O75694 1391 aa27.62■■■□□ 2.01
CHTOP-207ENST00000614256 RNF17Q9BXT8 1623 aaKnown RBP27.61■■■□□ 2.01
CHTOP-207ENST00000614256 KIF3BO15066 747 aa27.61■■■□□ 2.01
CHTOP-207ENST00000614256 REREQ9P2R6 1566 aa27.6■■■□□ 2.01
CHTOP-207ENST00000614256 IQGAP3Q86VI3 1631 aa27.59■■■□□ 2.01
CHTOP-207ENST00000614256 ACIN1Q9UKV3 1341 aaKnown RBP27.59■■■□□ 2.01
CHTOP-207ENST00000614256 MPHOSPH9Q99550 1183 aa27.58■■■□□ 2.01
CHTOP-207ENST00000614256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.58■■■□□ 2.014e-10■□□□□ 9.2
CHTOP-207ENST00000614256 FAM135AQ9P2D6 1515 aa27.58■■■□□ 2
CHTOP-207ENST00000614256 PRDM15P57071 1507 aaPredicted RBP27.57■■■□□ 2
CHTOP-207ENST00000614256 VWDEQ8N2E2 1590 aa27.54■■■□□ 2
CHTOP-207ENST00000614256 SLC4A1APQ9BWU0 796 aaKnown RBP27.53■■■□□ 2
CHTOP-207ENST00000614256 AGLP35573 1532 aa27.51■■□□□ 1.99
CHTOP-207ENST00000614256 CEP152O94986 1710 aa27.51■■□□□ 1.99
CHTOP-207ENST00000614256 FOXD1Q16676 465 aa27.5■■□□□ 1.99
CHTOP-207ENST00000614256 GGT6Q6P531 493 aa27.47■■□□□ 1.99
CHTOP-207ENST00000614256 CLSPNQ9HAW4 1339 aa27.46■■□□□ 1.99
CHTOP-207ENST00000614256 PKD2Q13563 968 aa27.46■■□□□ 1.99
CHTOP-207ENST00000614256 TET3O43151 1660 aa27.45■■□□□ 1.99
CHTOP-207ENST00000614256 E9PCH4 1651 aa27.44■■□□□ 1.98
CHTOP-207ENST00000614256 KANK1Q14678 1352 aa27.44■■□□□ 1.98
CHTOP-207ENST00000614256 ABCC3O15438 1527 aa27.4■■□□□ 1.98
CHTOP-207ENST00000614256 LMTK2Q8IWU2 1503 aa27.39■■□□□ 1.98
CHTOP-207ENST00000614256 SIN3AQ96ST3 1273 aa27.38■■□□□ 1.97
CHTOP-207ENST00000614256 ANKRD30BQ9BXX2 1392 aa27.38■■□□□ 1.97
CHTOP-207ENST00000614256 ZC3H13Q5T200 1668 aaKnown RBP27.38■■□□□ 1.97
CHTOP-207ENST00000614256 EFCAB6Q5THR3 1501 aa27.37■■□□□ 1.97
CHTOP-207ENST00000614256 CAMSAP1Q5T5Y3 1602 aa27.36■■□□□ 1.97
CHTOP-207ENST00000614256 CFAP65Q6ZU64 1925 aaKnown RBP27.33■■□□□ 1.97
CHTOP-207ENST00000614256 MLECQ14165 292 aa27.33■■□□□ 1.97
CHTOP-207ENST00000614256 ARID4BQ4LE39 1312 aaPredicted RBP27.33■■□□□ 1.97
CHTOP-207ENST00000614256 WASHC2CQ9Y4E1 1318 aa27.33■■□□□ 1.97
CHTOP-207ENST00000614256 CLTCQ00610 1675 aaKnown RBP27.32■■□□□ 1.96
CHTOP-207ENST00000614256 PLA2R1Q13018 1463 aa27.3■■□□□ 1.96
CHTOP-207ENST00000614256 SPHKAPQ2M3C7 1700 aa27.3■■□□□ 1.96
CHTOP-207ENST00000614256 NEUROD1Q13562 356 aa27.29■■□□□ 1.96
CHTOP-207ENST00000614256 ZEB1P37275 1124 aaPredicted RBP27.26■■□□□ 1.95
CHTOP-207ENST00000614256 NPATQ14207 1427 aa27.26■■□□□ 1.95
CHTOP-207ENST00000614256 PPP6R1Q9UPN7 881 aa27.23■■□□□ 1.95
CHTOP-207ENST00000614256 RPRD2Q5VT52 1461 aaKnown RBP27.22■■□□□ 1.95
CHTOP-207ENST00000614256 PTPRTO14522 1441 aa27.22■■□□□ 1.95
CHTOP-207ENST00000614256 TRPM2O94759 1503 aa27.21■■□□□ 1.95
CHTOP-207ENST00000614256 ARHGAP31Q2M1Z3 1444 aa27.2■■□□□ 1.95
CHTOP-207ENST00000614256 FER1L4A9Z1Z3 1794 aa27.2■■□□□ 1.94
CHTOP-207ENST00000614256 PREX1Q8TCU6 1659 aa27.18■■□□□ 1.94
CHTOP-207ENST00000614256 CLTCL1P53675 1640 aa27.17■■□□□ 1.94
CHTOP-207ENST00000614256 UGGT1Q9NYU2 1555 aa27.16■■□□□ 1.94
CHTOP-207ENST00000614256 CCDC144AA2RUR9 1427 aa27.15■■□□□ 1.94
CHTOP-207ENST00000614256 MROH2AA6NES4 1674 aa27.15■■□□□ 1.94
CHTOP-207ENST00000614256 SYNMO15061 1565 aa27.14■■□□□ 1.93
CHTOP-207ENST00000614256 NOS1P29475 1434 aa27.12■■□□□ 1.93
CHTOP-207ENST00000614256 ESF1Q9H501 851 aaKnown RBP27.11■■□□□ 1.93
CHTOP-207ENST00000614256 MADDQ8WXG6 1647 aa27.11■■□□□ 1.93
CHTOP-207ENST00000614256 ADAMTSL3P82987 1691 aa27.11■■□□□ 1.93
CHTOP-207ENST00000614256 TONSLQ96HA7 1378 aa27.1■■□□□ 1.93
CHTOP-207ENST00000614256 FBXO31Q5XUX0 539 aaPredicted RBP27.09■■□□□ 1.93
CHTOP-207ENST00000614256 ZMYM3Q14202 1370 aa27.09■■□□□ 1.93
CHTOP-207ENST00000614256 CNTLNQ9NXG0 1405 aa27.09■■□□□ 1.93
CHTOP-207ENST00000614256 ERVK-7P63135 1459 aa27.08■■□□□ 1.93
CHTOP-207ENST00000614256 C3P01024 1663 aa27.07■■□□□ 1.92
CHTOP-207ENST00000614256 PIK3C2BO00750 1634 aa27.07■■□□□ 1.92
CHTOP-207ENST00000614256 RIMS1Q86UR5 1692 aaKnown RBP27.06■■□□□ 1.92
CHTOP-207ENST00000614256 KIF1BO60333 1816 aa27.06■■□□□ 1.92
CHTOP-207ENST00000614256 SPATA31D1Q6ZQQ2 1576 aa27.06■■□□□ 1.92
CHTOP-207ENST00000614256 TIMELESSQ9UNS1 1208 aa27.05■■□□□ 1.92
CHTOP-207ENST00000614256 L3MBTL2Q969R5 705 aa27.03■■□□□ 1.92
CHTOP-207ENST00000614256 SPATA31E1Q6ZUB1 1445 aa27.01■■□□□ 1.91
CHTOP-207ENST00000614256 CEBPAP49715 358 aaPredicted RBP26.99■■□□□ 1.91
CHTOP-207ENST00000614256 MYO5BQ9ULV0 1848 aa26.98■■□□□ 1.91
CHTOP-207ENST00000614256 PPP1R15AO75807 674 aaPredicted RBP26.97■■□□□ 1.91
CHTOP-207ENST00000614256 RGL3Q3MIN7 710 aa26.95■■□□□ 1.91
CHTOP-207ENST00000614256 ADGRB3O60242 1522 aa26.95■■□□□ 1.9
CHTOP-207ENST00000614256 NEURL4Q96JN8 1562 aa26.94■■□□□ 1.9
CHTOP-207ENST00000614256 IDI1Q13907 227 aa26.94■■□□□ 1.9
CHTOP-207ENST00000614256 PLPPR3Q6T4P5 718 aa26.91■■□□□ 1.9
CHTOP-207ENST00000614256 TMEM131LA2VDJ0 1609 aa26.91■■□□□ 1.9
CHTOP-207ENST00000614256 SLC52A1Q9NWF4 448 aa26.9■■□□□ 1.9
CHTOP-207ENST00000614256 IFT172Q9UG01 1749 aa26.9■■□□□ 1.9
CHTOP-207ENST00000614256 TNRQ92752 1358 aa26.89■■□□□ 1.9
CHTOP-207ENST00000614256 CHGAP10645 457 aaKnown RBP26.88■■□□□ 1.89
CHTOP-207ENST00000614256 DCAF11Q8TEB1 546 aa26.88■■□□□ 1.89
CHTOP-207ENST00000614256 PPLO60437 1756 aa26.85■■□□□ 1.89
CHTOP-207ENST00000614256 NBPF8Q3BBV2 869 aa26.85■■□□□ 1.89
CHTOP-207ENST00000614256 KDM2AQ9Y2K7 1162 aa26.85■■□□□ 1.89
CHTOP-207ENST00000614256 PTPRMP28827 1452 aa26.81■■□□□ 1.88
CHTOP-207ENST00000614256 UBR1Q8IWV7 1749 aa26.81■■□□□ 1.88
CHTOP-207ENST00000614256 MYO3AQ8NEV4 1616 aa26.81■■□□□ 1.88
CHTOP-207ENST00000614256 UHRF1BP1Q6BDS2 1440 aa26.8■■□□□ 1.88
CHTOP-207ENST00000614256 ZNF326Q5BKZ1 582 aaKnown RBP26.79■■□□□ 1.88
CHTOP-207ENST00000614256 A2ML1A8K2U0 1454 aa26.79■■□□□ 1.88
CHTOP-207ENST00000614256 NEXMIFQ5QGS0 1516 aa26.79■■□□□ 1.88
CHTOP-207ENST00000614256 KDM5AP29375 1690 aaKnown RBP26.78■■□□□ 1.88
CHTOP-207ENST00000614256 PRAG1Q86YV5 1406 aa26.77■■□□□ 1.88
CHTOP-207ENST00000614256 NLRP1Q9C000 1473 aa26.77■■□□□ 1.88
CHTOP-207ENST00000614256 SETD1BQ9UPS6 1966 aaKnown RBP26.75■■□□□ 1.87
CHTOP-207ENST00000614256 MYOM2P54296 1465 aa26.74■■□□□ 1.87
CHTOP-207ENST00000614256 TRPM1Q7Z4N2 1603 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms