RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 UHRF1BP1Q6BDS2 1440 aa19.35■□□□□ 0.69
PCDHGA3-202ENST00000612467 PLA2R1Q13018 1463 aa19.34■□□□□ 0.69
PCDHGA3-202ENST00000612467 MYO5CQ9NQX4 1742 aa19.34■□□□□ 0.69
PCDHGA3-202ENST00000612467 ZCCHC11Q5TAX3 1644 aaKnown RBP19.32■□□□□ 0.68
PCDHGA3-202ENST00000612467 ROCK2O75116 1388 aaKnown RBP19.32■□□□□ 0.68
PCDHGA3-202ENST00000612467 CCDC144AA2RUR9 1427 aa19.32■□□□□ 0.68
PCDHGA3-202ENST00000612467 RSPH4AQ5TD94 716 aa19.31■□□□□ 0.68
PCDHGA3-202ENST00000612467 AFAP1Q8N556 730 aa19.31■□□□□ 0.68
PCDHGA3-202ENST00000612467 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
PCDHGA3-202ENST00000612467 CLASP1Q7Z460 1538 aa19.28■□□□□ 0.68
PCDHGA3-202ENST00000612467 EFCAB2Q5VUJ9 269 aa19.27■□□□□ 0.67
PCDHGA3-202ENST00000612467 PLCH2O75038 1416 aa19.27■□□□□ 0.67
PCDHGA3-202ENST00000612467 A2MP01023 1474 aa19.25■□□□□ 0.67
PCDHGA3-202ENST00000612467 PRAG1Q86YV5 1406 aa19.25■□□□□ 0.67
PCDHGA3-202ENST00000612467 UNC13BO14795 1591 aa19.25■□□□□ 0.67
PCDHGA3-202ENST00000612467 MAST1Q9Y2H9 1570 aa19.25■□□□□ 0.67
PCDHGA3-202ENST00000612467 ZBED9Q6R2W3 1325 aa19.23■□□□□ 0.67
PCDHGA3-202ENST00000612467 MYT1LQ9UL68 1186 aa19.21■□□□□ 0.67
PCDHGA3-202ENST00000612467 PLXNC1O60486 1568 aa19.2■□□□□ 0.66
PCDHGA3-202ENST00000612467 TRPM1Q7Z4N2 1603 aa19.2■□□□□ 0.66
PCDHGA3-202ENST00000612467 ABCC1P33527 1531 aa19.2■□□□□ 0.66
PCDHGA3-202ENST00000612467 SPAG9O60271 1321 aaKnown RBP19.19■□□□□ 0.66
PCDHGA3-202ENST00000612467 TMC1Q8TDI8 760 aa19.19■□□□□ 0.66
PCDHGA3-202ENST00000612467 DUOX2Q9NRD8 1548 aa19.19■□□□□ 0.66
PCDHGA3-202ENST00000612467 IQGAP3Q86VI3 1631 aa19.19■□□□□ 0.66
PCDHGA3-202ENST00000612467 SALL2Q9Y467 1007 aaPredicted RBP19.17■□□□□ 0.66
PCDHGA3-202ENST00000612467 PNISRQ8TF01 805 aaKnown RBP19.17■□□□□ 0.66
PCDHGA3-202ENST00000612467 DISP3Q9P2K9 1392 aa19.17■□□□□ 0.66
PCDHGA3-202ENST00000612467 ARID4BQ4LE39 1312 aaPredicted RBP19.16■□□□□ 0.66
PCDHGA3-202ENST00000612467 UHRF1BP1LA0JNW5 1464 aa19.15■□□□□ 0.66
PCDHGA3-202ENST00000612467 B4GALNT3Q6L9W6 998 aa19.15■□□□□ 0.66
PCDHGA3-202ENST00000612467 ERBINQ96RT1 1412 aa19.14■□□□□ 0.65
PCDHGA3-202ENST00000612467 CC2D1BQ5T0F9 858 aaKnown RBP19.13■□□□□ 0.65
PCDHGA3-202ENST00000612467 TESK2Q96S53 571 aa19.13■□□□□ 0.65
PCDHGA3-202ENST00000612467 RBM19Q9Y4C8 960 aaKnown RBP19.13■□□□□ 0.65
PCDHGA3-202ENST00000612467 MAGI2Q86UL8 1455 aa19.11■□□□□ 0.65
PCDHGA3-202ENST00000612467 KIF3BO15066 747 aa19.1■□□□□ 0.65
PCDHGA3-202ENST00000612467 E9PCH4 1651 aa19.09■□□□□ 0.65
PCDHGA3-202ENST00000612467 ZFYVE16Q7Z3T8 1539 aa19.09■□□□□ 0.65
PCDHGA3-202ENST00000612467 SCAPERQ9BY12 1400 aa19.09■□□□□ 0.65
PCDHGA3-202ENST00000612467 WDR7Q9Y4E6 1490 aa19.09■□□□□ 0.65
PCDHGA3-202ENST00000612467 FANCAO15360 1455 aa19.08■□□□□ 0.65
PCDHGA3-202ENST00000612467 MYBBP1AQ9BQG0 1328 aaKnown RBP19.08■□□□□ 0.65
PCDHGA3-202ENST00000612467 PER1O15534 1290 aaPredicted RBP19.08■□□□□ 0.64
PCDHGA3-202ENST00000612467 PANK3Q9H999 370 aa19.08■□□□□ 0.64
PCDHGA3-202ENST00000612467 GPRASP1Q5JY77 1395 aa19.07■□□□□ 0.64
PCDHGA3-202ENST00000612467 ATP10AO60312 1499 aa19.06■□□□□ 0.64
PCDHGA3-202ENST00000612467 PRDM15P57071 1507 aaPredicted RBP19.05■□□□□ 0.64
PCDHGA3-202ENST00000612467 PPP4R2Q9NY27 417 aa19.05■□□□□ 0.64
PCDHGA3-202ENST00000612467 NUDCQ9Y266 331 aa19.04■□□□□ 0.64
PCDHGA3-202ENST00000612467 COL17A1Q9UMD9 1497 aaPredicted RBP19.04■□□□□ 0.64
PCDHGA3-202ENST00000612467 UGGT1Q9NYU2 1555 aa19.03■□□□□ 0.64
PCDHGA3-202ENST00000612467 RALBP1Q15311 655 aa19.03■□□□□ 0.64
PCDHGA3-202ENST00000612467 ASXL2Q76L83 1435 aa19.03■□□□□ 0.64
PCDHGA3-202ENST00000612467 ADGRL1O94910 1474 aa19.03■□□□□ 0.64
PCDHGA3-202ENST00000612467 SMG6Q86US8 1419 aaKnown RBP19.02■□□□□ 0.64
PCDHGA3-202ENST00000612467 KTN1Q86UP2 1357 aaKnown RBP19.02■□□□□ 0.64
PCDHGA3-202ENST00000612467 ATP7AQ04656 1500 aa19.01■□□□□ 0.63
PCDHGA3-202ENST00000612467 CLTCL1P53675 1640 aa19.01■□□□□ 0.63
PCDHGA3-202ENST00000612467 BRD4O60885 1362 aaPredicted RBP19■□□□□ 0.63
PCDHGA3-202ENST00000612467 LRPPRCP42704 1394 aaKnown RBP19■□□□□ 0.63
PCDHGA3-202ENST00000612467 TMF1P82094 1093 aa19■□□□□ 0.63
PCDHGA3-202ENST00000612467 PARD3Q8TEW0 1356 aa19■□□□□ 0.63
PCDHGA3-202ENST00000612467 RTEL1-TNFRSF6BF6WH68 1400 aa18.99■□□□□ 0.63
PCDHGA3-202ENST00000612467 ABCA9Q8IUA7 1624 aa18.98■□□□□ 0.63
PCDHGA3-202ENST00000612467 NLRP13Q86W25 1043 aa18.98■□□□□ 0.63
PCDHGA3-202ENST00000612467 MADDQ8WXG6 1647 aa18.97■□□□□ 0.63
PCDHGA3-202ENST00000612467 SPHKAPQ2M3C7 1700 aa18.97■□□□□ 0.63
PCDHGA3-202ENST00000612467 EIF2AK4Q9P2K8 1649 aaKnown RBP18.97■□□□□ 0.63
PCDHGA3-202ENST00000612467 INO80Q9ULG1 1556 aaPredicted RBP18.96■□□□□ 0.63
PCDHGA3-202ENST00000612467 TRPM2O94759 1503 aa18.96■□□□□ 0.63
PCDHGA3-202ENST00000612467 CDCA7LQ96GN5 454 aa18.95■□□□□ 0.62
PCDHGA3-202ENST00000612467 CFAP70Q5T0N1 1121 aa18.95■□□□□ 0.62
PCDHGA3-202ENST00000612467 RNF17Q9BXT8 1623 aaKnown RBP18.94■□□□□ 0.62
PCDHGA3-202ENST00000612467 CFAP65Q6ZU64 1925 aaKnown RBP18.94■□□□□ 0.62
PCDHGA3-202ENST00000612467 LAMC1P11047 1609 aa18.94■□□□□ 0.62
PCDHGA3-202ENST00000612467 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
PCDHGA3-202ENST00000612467 ARAP3Q8WWN8 1544 aa18.93■□□□□ 0.62
PCDHGA3-202ENST00000612467 ADGRF5Q8IZF2 1346 aa18.93■□□□□ 0.62
PCDHGA3-202ENST00000612467 PTPRTO14522 1441 aa18.93■□□□□ 0.62
PCDHGA3-202ENST00000612467 CHGAP10645 457 aaKnown RBP18.93■□□□□ 0.62
PCDHGA3-202ENST00000612467 DEPDC5O75140 1603 aa18.93■□□□□ 0.62
PCDHGA3-202ENST00000612467 KANK1Q14678 1352 aa18.93■□□□□ 0.62
PCDHGA3-202ENST00000612467 CEP152O94986 1710 aa18.92■□□□□ 0.62
PCDHGA3-202ENST00000612467 GGT6Q6P531 493 aa18.91■□□□□ 0.62
PCDHGA3-202ENST00000612467 MROH1Q8NDA8 1641 aa18.91■□□□□ 0.62
PCDHGA3-202ENST00000612467 TET3O43151 1660 aa18.9■□□□□ 0.62
PCDHGA3-202ENST00000612467 ERICH6BQ5W0A0 696 aa18.9■□□□□ 0.62
PCDHGA3-202ENST00000612467 MSH5O43196 834 aa18.89■□□□□ 0.61
PCDHGA3-202ENST00000612467 KIDINS220Q9ULH0 1771 aa18.89■□□□□ 0.61
PCDHGA3-202ENST00000612467 NPM1P06748 294 aaKnown RBP eCLIP18.88■□□□□ 0.61
PCDHGA3-202ENST00000612467 OSCARQ8IYS5 282 aa18.88■□□□□ 0.61
PCDHGA3-202ENST00000612467 RNF123Q5XPI4 1314 aa18.88■□□□□ 0.61
PCDHGA3-202ENST00000612467 IQGAP1P46940 1657 aa18.88■□□□□ 0.61
PCDHGA3-202ENST00000612467 VWDEQ8N2E2 1590 aa18.87■□□□□ 0.61
PCDHGA3-202ENST00000612467 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
PCDHGA3-202ENST00000612467 RAPGEF3O95398 923 aa18.86■□□□□ 0.61
PCDHGA3-202ENST00000612467 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
PCDHGA3-202ENST00000612467 SCAF11Q99590 1463 aaKnown RBP18.86■□□□□ 0.61
PCDHGA3-202ENST00000612467 CCDC136Q96JN2 1154 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms