RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 RALBP1Q15311 655 aa11.95□□□□□ -0.5
SRGAP2B-204ENST00000612199 DRC7Q8IY82 874 aa11.95□□□□□ -0.5
SRGAP2B-204ENST00000612199 PAXIP1Q6ZW49 1069 aaPredicted RBP11.95□□□□□ -0.5
SRGAP2B-204ENST00000612199 WASHC2CQ9Y4E1 1318 aa11.95□□□□□ -0.5
SRGAP2B-204ENST00000612199 APBB1O00213 710 aa11.94□□□□□ -0.5
SRGAP2B-204ENST00000612199 BBXQ8WY36 941 aaPredicted RBP11.94□□□□□ -0.5
SRGAP2B-204ENST00000612199 CCDC18Q5T9S5 1454 aa11.94□□□□□ -0.5
SRGAP2B-204ENST00000612199 CCAR1Q8IX12 1150 aaKnown RBP11.94□□□□□ -0.5
SRGAP2B-204ENST00000612199 HDGFL2Q7Z4V5 671 aaPredicted RBP11.94□□□□□ -0.5
SRGAP2B-204ENST00000612199 DHX57Q6P158 1386 aaKnown RBP11.94□□□□□ -0.5
SRGAP2B-204ENST00000612199 RASSF8Q8NHQ8 419 aa11.94□□□□□ -0.5
SRGAP2B-204ENST00000612199 CCDC146Q8IYE0 955 aa11.93□□□□□ -0.5
SRGAP2B-204ENST00000612199 ST20-MTHFSA0A0A6YYL1 179 aa11.93□□□□□ -0.5
SRGAP2B-204ENST00000612199 GTF2E1P29083 439 aaPredicted RBP11.93□□□□□ -0.5
SRGAP2B-204ENST00000612199 TRAK1Q9UPV9 953 aa11.93□□□□□ -0.5
SRGAP2B-204ENST00000612199 RAD54L2Q9Y4B4 1467 aa11.93□□□□□ -0.5
SRGAP2B-204ENST00000612199 CHMP3Q9Y3E7 222 aa11.92□□□□□ -0.5
SRGAP2B-204ENST00000612199 TRIM34Q9BYJ4 488 aa11.92□□□□□ -0.5
SRGAP2B-204ENST00000612199 RSPH4AQ5TD94 716 aa11.92□□□□□ -0.5
SRGAP2B-204ENST00000612199 RCAN3Q9UKA8 241 aa11.92□□□□□ -0.5
SRGAP2B-204ENST00000612199 L1TD1Q5T7N2 865 aaKnown RBP11.91□□□□□ -0.5
SRGAP2B-204ENST00000612199 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
SRGAP2B-204ENST00000612199 IGF1RP08069 1367 aa11.9□□□□□ -0.5
SRGAP2B-204ENST00000612199 RTF1Q92541 710 aaKnown RBP11.9□□□□□ -0.5
SRGAP2B-204ENST00000612199 NAP1L5Q96NT1 182 aaPredicted RBP11.9□□□□□ -0.5
SRGAP2B-204ENST00000612199 FGD5Q6ZNL6 1462 aa11.9□□□□□ -0.5
SRGAP2B-204ENST00000612199 ZNF644Q9H582 1327 aaPredicted RBP11.89□□□□□ -0.51
SRGAP2B-204ENST00000612199 CYB5RLQ6IPT4 315 aa11.89□□□□□ -0.51
SRGAP2B-204ENST00000612199 RBM19Q9Y4C8 960 aaKnown RBP11.88□□□□□ -0.51
SRGAP2B-204ENST00000612199 GOLGA6L4A6NEF3 574 aa11.88□□□□□ -0.51
SRGAP2B-204ENST00000612199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.88□□□□□ -0.51
SRGAP2B-204ENST00000612199 PTPRGP23470 1445 aa11.88□□□□□ -0.51
SRGAP2B-204ENST00000612199 CBX1P83916 185 aa11.88□□□□□ -0.51
SRGAP2B-204ENST00000612199 CLUAP1Q96AJ1 413 aa11.88□□□□□ -0.51
SRGAP2B-204ENST00000612199 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
SRGAP2B-204ENST00000612199 HSP90AB1P08238 724 aaKnown RBP11.87□□□□□ -0.51
SRGAP2B-204ENST00000612199 IPO8O15397 1037 aaKnown RBP11.86□□□□□ -0.51
SRGAP2B-204ENST00000612199 TNNT3P45378 269 aaPredicted RBP11.86□□□□□ -0.51
SRGAP2B-204ENST00000612199 NLRP13Q86W25 1043 aa11.86□□□□□ -0.51
SRGAP2B-204ENST00000612199 ITPRIPQ8IWB1 547 aa11.86□□□□□ -0.51
SRGAP2B-204ENST00000612199 RRP7AQ9Y3A4 280 aaKnown RBP11.86□□□□□ -0.51
SRGAP2B-204ENST00000612199 PANK3Q9H999 370 aa11.85□□□□□ -0.51
SRGAP2B-204ENST00000612199 PES1O00541 588 aaKnown RBP11.85□□□□□ -0.51
SRGAP2B-204ENST00000612199 MYCNP04198 464 aaPredicted RBP11.85□□□□□ -0.51
SRGAP2B-204ENST00000612199 GAPVD1Q14C86 1478 aa11.85□□□□□ -0.51
SRGAP2B-204ENST00000612199 HSP90B1P14625 803 aaKnown RBP11.85□□□□□ -0.51
SRGAP2B-204ENST00000612199 PDE3BQ13370 1112 aa11.85□□□□□ -0.51
SRGAP2B-204ENST00000612199 TCERG1O14776 1098 aaKnown RBP11.84□□□□□ -0.51
SRGAP2B-204ENST00000612199 CCDC144AA2RUR9 1427 aa11.84□□□□□ -0.51
SRGAP2B-204ENST00000612199 NRDCO43847 1150 aa11.84□□□□□ -0.51
SRGAP2B-204ENST00000612199 HSCBQ8IWL3 235 aa11.84□□□□□ -0.51
SRGAP2B-204ENST00000612199 CALD1Q05682 793 aaKnown RBP11.84□□□□□ -0.51
SRGAP2B-204ENST00000612199 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.83□□□□□ -0.52
SRGAP2B-204ENST00000612199 LTV1Q96GA3 475 aaPredicted RBP11.83□□□□□ -0.52
SRGAP2B-204ENST00000612199 AQRO60306 1485 aaKnown RBP eCLIP11.83□□□□□ -0.52
SRGAP2B-204ENST00000612199 EIF3AQ14152 1382 aaKnown RBP11.83□□□□□ -0.52
SRGAP2B-204ENST00000612199 SLC4A3P48751 1232 aa11.83□□□□□ -0.52
SRGAP2B-204ENST00000612199 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
SRGAP2B-204ENST00000612199 TMEM132AQ24JP5 1023 aa11.82□□□□□ -0.52
SRGAP2B-204ENST00000612199 NGDNQ8NEJ9 315 aaKnown RBP11.82□□□□□ -0.52
SRGAP2B-204ENST00000612199 GORABQ5T7V8 394 aa11.81□□□□□ -0.52
SRGAP2B-204ENST00000612199 RWDD1Q9H446 243 aaPredicted RBP11.81□□□□□ -0.52
SRGAP2B-204ENST00000612199 SMC4Q9NTJ3 1288 aa11.81□□□□□ -0.52
SRGAP2B-204ENST00000612199 TOMM22Q9NS69 142 aa11.81□□□□□ -0.52
SRGAP2B-204ENST00000612199 TMEM87AQ8NBN3 555 aa11.8□□□□□ -0.52
SRGAP2B-204ENST00000612199 PHLDB1Q86UU1 1377 aa11.8□□□□□ -0.52
SRGAP2B-204ENST00000612199 BCL2L13Q9BXK5 485 aa11.8□□□□□ -0.52
SRGAP2B-204ENST00000612199 EID1Q9Y6B2 187 aa11.8□□□□□ -0.52
SRGAP2B-204ENST00000612199 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
SRGAP2B-204ENST00000612199 ELL2O00472 640 aaPredicted RBP11.79□□□□□ -0.52
SRGAP2B-204ENST00000612199 MCCP23508 829 aa11.79□□□□□ -0.52
SRGAP2B-204ENST00000612199 USP47Q96K76 1375 aa11.79□□□□□ -0.52
SRGAP2B-204ENST00000612199 PLIN1O60240 522 aa11.79□□□□□ -0.52
SRGAP2B-204ENST00000612199 CHMP4AQ9BY43 222 aa11.78□□□□□ -0.52
SRGAP2B-204ENST00000612199 SF3B2Q13435 895 aaKnown RBP11.78□□□□□ -0.52
SRGAP2B-204ENST00000612199 SLC4A10Q6U841 1118 aa11.78□□□□□ -0.52
SRGAP2B-204ENST00000612199 MINK1Q8N4C8 1332 aaPredicted RBP11.78□□□□□ -0.52
SRGAP2B-204ENST00000612199 AMPHP49418 695 aa11.77□□□□□ -0.53
SRGAP2B-204ENST00000612199 SLKQ9H2G2 1235 aaPredicted RBP11.77□□□□□ -0.53
SRGAP2B-204ENST00000612199 PTMSP20962 102 aa11.77□□□□□ -0.53
SRGAP2B-204ENST00000612199 OSCARQ8IYS5 282 aa11.77□□□□□ -0.53
SRGAP2B-204ENST00000612199 KIF15Q9NS87 1388 aa11.76□□□□□ -0.53
SRGAP2B-204ENST00000612199 MYBBP1AQ9BQG0 1328 aaKnown RBP11.76□□□□□ -0.53
SRGAP2B-204ENST00000612199 KIF21BO75037 1637 aa11.76□□□□□ -0.53
SRGAP2B-204ENST00000612199 PMFBP1Q8TBY8 1022 aa11.75□□□□□ -0.53
SRGAP2B-204ENST00000612199 R3HCC1Q9Y3T6 440 aaKnown RBP11.75□□□□□ -0.53
SRGAP2B-204ENST00000612199 CENPJQ9HC77 1338 aaPredicted RBP11.75□□□□□ -0.53
SRGAP2B-204ENST00000612199 FGD6Q6ZV73 1430 aa11.75□□□□□ -0.53
SRGAP2B-204ENST00000612199 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
SRGAP2B-204ENST00000612199 WWC2Q6AWC2 1192 aa11.75□□□□□ -0.53
SRGAP2B-204ENST00000612199 FOXD4L1Q9NU39 408 aa11.75□□□□□ -0.53
SRGAP2B-204ENST00000612199 CA8P35219 290 aa11.74□□□□□ -0.53
SRGAP2B-204ENST00000612199 PODXL2Q9NZ53 605 aa11.74□□□□□ -0.53
SRGAP2B-204ENST00000612199 STK31Q9BXU1 1019 aa11.74□□□□□ -0.53
SRGAP2B-204ENST00000612199 GRM1Q13255 1194 aa11.74□□□□□ -0.53
SRGAP2B-204ENST00000612199 NCAPD3P42695 1498 aa11.73□□□□□ -0.53
SRGAP2B-204ENST00000612199 NESP48681 1621 aa11.73□□□□□ -0.53
SRGAP2B-204ENST00000612199 ZFYVE27Q5T4F4 411 aa11.73□□□□□ -0.53
SRGAP2B-204ENST00000612199 CCDC43Q96MW1 224 aaKnown RBP11.73□□□□□ -0.53
SRGAP2B-204ENST00000612199 CHMP4BP1P59074 171 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms