RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 LMTK3Q96Q04 1460 aa39.9■■■■□ 3.98
VEGFA-226ENST00000611736 NCOA1Q15788 1441 aa39.88■■■■□ 3.97
VEGFA-226ENST00000611736 RNF17Q9BXT8 1623 aaKnown RBP39.87■■■■□ 3.97
VEGFA-226ENST00000611736 ADGRL2O95490 1459 aa39.86■■■■□ 3.97
VEGFA-226ENST00000611736 SETD1BQ9UPS6 1966 aaKnown RBP39.85■■■■□ 3.97
VEGFA-226ENST00000611736 PTPRKQ15262 1439 aa39.84■■■■□ 3.97
VEGFA-226ENST00000611736 ERBINQ96RT1 1412 aa39.84■■■■□ 3.97
VEGFA-226ENST00000611736 KDM5DQ9BY66 1539 aa39.84■■■■□ 3.97
VEGFA-226ENST00000611736 WASHC2CQ9Y4E1 1318 aa39.83■■■■□ 3.97
VEGFA-226ENST00000611736 PREX1Q8TCU6 1659 aa39.83■■■■□ 3.97
VEGFA-226ENST00000611736 ITGAEP38570 1179 aa39.81■■■■□ 3.96
VEGFA-226ENST00000611736 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.81■■■■□ 3.963e-7■■□□□ 14.3
VEGFA-226ENST00000611736 FAM135AQ9P2D6 1515 aa39.81■■■■□ 3.96
VEGFA-226ENST00000611736 MROH1Q8NDA8 1641 aa39.77■■■■□ 3.96
VEGFA-226ENST00000611736 RRBP1Q9P2E9 1410 aaKnown RBP39.77■■■■□ 3.96
VEGFA-226ENST00000611736 HSPA2P54652 639 aa39.76■■■■□ 3.96
VEGFA-226ENST00000611736 UHRF1BP1Q6BDS2 1440 aa39.75■■■■□ 3.95
VEGFA-226ENST00000611736 NPATQ14207 1427 aa39.74■■■■□ 3.95
VEGFA-226ENST00000611736 ABCC3O15438 1527 aa39.71■■■■□ 3.95
VEGFA-226ENST00000611736 ZC3H13Q5T200 1668 aaKnown RBP39.68■■■■□ 3.94
VEGFA-226ENST00000611736 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.68■■■■□ 3.941e-14■■■□□ 16.5
VEGFA-226ENST00000611736 PRDM15P57071 1507 aaPredicted RBP39.67■■■■□ 3.94
VEGFA-226ENST00000611736 CEP152O94986 1710 aa39.67■■■■□ 3.94
VEGFA-226ENST00000611736 ROCK1Q13464 1354 aa39.66■■■■□ 3.94
VEGFA-226ENST00000611736 ANKRD50Q9ULJ7 1429 aa39.65■■■■□ 3.94
VEGFA-226ENST00000611736 DEPDC5O75140 1603 aa39.65■■■■□ 3.94
VEGFA-226ENST00000611736 PZPP20742 1482 aa39.65■■■■□ 3.94
VEGFA-226ENST00000611736 FBXO31Q5XUX0 539 aaPredicted RBP39.62■■■■□ 3.93
VEGFA-226ENST00000611736 KANK1Q14678 1352 aa39.59■■■■□ 3.93
VEGFA-226ENST00000611736 MYO3AQ8NEV4 1616 aa39.58■■■■□ 3.93
VEGFA-226ENST00000611736 CAMSAP1Q5T5Y3 1602 aa39.57■■■■□ 3.92
VEGFA-226ENST00000611736 TNRQ92752 1358 aa39.54■■■■□ 3.92
VEGFA-226ENST00000611736 CFAP65Q6ZU64 1925 aaKnown RBP39.5■■■■□ 3.91
VEGFA-226ENST00000611736 VWDEQ8N2E2 1590 aa39.49■■■■□ 3.91
VEGFA-226ENST00000611736 ZNF142P52746 1687 aaPredicted RBP39.48■■■■□ 3.91
VEGFA-226ENST00000611736 CEP170BQ9Y4F5 1589 aaPredicted RBP39.47■■■■□ 3.91
VEGFA-226ENST00000611736 ERVK-7P63135 1459 aa39.44■■■■□ 3.9
VEGFA-226ENST00000611736 LMTK2Q8IWU2 1503 aa39.44■■■■□ 3.9
VEGFA-226ENST00000611736 SPATA31D1Q6ZQQ2 1576 aa39.42■■■■□ 3.9
VEGFA-226ENST00000611736 ARHGAP31Q2M1Z3 1444 aa39.42■■■■□ 3.9
VEGFA-226ENST00000611736 A2ML1A8K2U0 1454 aa39.41■■■■□ 3.9
VEGFA-226ENST00000611736 UNC13BO14795 1591 aa39.41■■■■□ 3.9
VEGFA-226ENST00000611736 STRCQ7RTU9 1775 aa39.38■■■■□ 3.9
VEGFA-226ENST00000611736 ILDR1Q86SU0 546 aaPredicted RBP39.36■■■■□ 3.89
VEGFA-226ENST00000611736 NLRP1Q9C000 1473 aa39.35■■■■□ 3.89
VEGFA-226ENST00000611736 EFCAB6Q5THR3 1501 aa39.35■■■■□ 3.89
VEGFA-226ENST00000611736 NAIPQ13075 1403 aa39.32■■■■□ 3.89
VEGFA-226ENST00000611736 GCC2Q8IWJ2 1684 aa39.3■■■■□ 3.88
VEGFA-226ENST00000611736 TET3O43151 1660 aa39.28■■■■□ 3.88
VEGFA-226ENST00000611736 NUP155O75694 1391 aa39.27■■■■□ 3.88
VEGFA-226ENST00000611736 IQGAP3Q86VI3 1631 aa39.25■■■■□ 3.87
VEGFA-226ENST00000611736 HFM1A2PYH4 1435 aa39.25■■■■□ 3.87
VEGFA-226ENST00000611736 DMRT2Q9Y5R5 561 aa39.25■■■■□ 3.87
VEGFA-226ENST00000611736 UGGT1Q9NYU2 1555 aa39.24■■■■□ 3.87
VEGFA-226ENST00000611736 PLA2R1Q13018 1463 aa39.24■■■■□ 3.87
VEGFA-226ENST00000611736 NCKAP5LQ9HCH0 1330 aa39.22■■■■□ 3.87
VEGFA-226ENST00000611736 RPRD2Q5VT52 1461 aaKnown RBP39.18■■■■□ 3.86
VEGFA-226ENST00000611736 THEMISQ8N1K5 641 aaPredicted RBP39.18■■■■□ 3.86
VEGFA-226ENST00000611736 SYNMO15061 1565 aa39.16■■■■□ 3.86
VEGFA-226ENST00000611736 NOS1P29475 1434 aa39.16■■■■□ 3.86
VEGFA-226ENST00000611736 PKD2Q13563 968 aa39.15■■■■□ 3.86
VEGFA-226ENST00000611736 PTPRTO14522 1441 aa39.14■■■■□ 3.86
VEGFA-226ENST00000611736 E9PCH4 1651 aa39.14■■■■□ 3.86
VEGFA-226ENST00000611736 UBR1Q8IWV7 1749 aa39.11■■■■□ 3.85
VEGFA-226ENST00000611736 FBXO41Q8TF61 875 aa39.1■■■■□ 3.85
VEGFA-226ENST00000611736 PIK3C2BO00750 1634 aa39.1■■■■□ 3.85
VEGFA-226ENST00000611736 IDI1Q13907 227 aa39.08■■■■□ 3.85
VEGFA-226ENST00000611736 POLR1AO95602 1720 aaPredicted RBP39.07■■■■□ 3.85
VEGFA-226ENST00000611736 TRIM52Q96A61 297 aa39.06■■■■□ 3.84
VEGFA-226ENST00000611736 ANKLE2Q86XL3 938 aa39.05■■■■□ 3.84
VEGFA-226ENST00000611736 STAG3Q9UJ98 1225 aa39.05■■■■□ 3.84
VEGFA-226ENST00000611736 SLC52A1Q9NWF4 448 aa39.02■■■■□ 3.84
VEGFA-226ENST00000611736 NEURL4Q96JN8 1562 aa39■■■■□ 3.83
VEGFA-226ENST00000611736 CERKQ8TCT0 537 aa38.98■■■■□ 3.83
VEGFA-226ENST00000611736 ADGRB3O60242 1522 aa38.95■■■■□ 3.83
VEGFA-226ENST00000611736 KDM5AP29375 1690 aaKnown RBP38.95■■■■□ 3.83
VEGFA-226ENST00000611736 SLIT1O75093 1534 aa38.93■■■■□ 3.82
VEGFA-226ENST00000611736 ARHGAP23Q9P227 1491 aa38.92■■■■□ 3.82
VEGFA-226ENST00000611736 NPHP4O75161 1426 aaPredicted RBP38.9■■■■□ 3.82
VEGFA-226ENST00000611736 SETD5Q9C0A6 1442 aa38.89■■■■□ 3.82
VEGFA-226ENST00000611736 SPHKAPQ2M3C7 1700 aa38.89■■■■□ 3.82
VEGFA-226ENST00000611736 TMEM2Q9UHN6 1383 aa38.89■■■■□ 3.82
VEGFA-226ENST00000611736 SCAF11Q99590 1463 aaKnown RBP38.89■■■■□ 3.82
VEGFA-226ENST00000611736 MED14O60244 1454 aa38.88■■■■□ 3.81
VEGFA-226ENST00000611736 TXNDC2Q86VQ3 553 aa38.88■■■■□ 3.81
VEGFA-226ENST00000611736 SLC4A1APQ9BWU0 796 aaKnown RBP38.88■■■■□ 3.81
VEGFA-226ENST00000611736 LTKP29376 864 aa38.87■■■■□ 3.81
VEGFA-226ENST00000611736 MYO5BQ9ULV0 1848 aa38.86■■■■□ 3.81
VEGFA-226ENST00000611736 IQGAP1P46940 1657 aa38.85■■■■□ 3.81
VEGFA-226ENST00000611736 CHGAP10645 457 aaKnown RBP38.85■■■■□ 3.81
VEGFA-226ENST00000611736 EID1Q9Y6B2 187 aa38.85■■■■□ 3.81
VEGFA-226ENST00000611736 ZNF335Q9H4Z2 1342 aaPredicted RBP38.84■■■■□ 3.81
VEGFA-226ENST00000611736 TMEM131LA2VDJ0 1609 aa38.82■■■■□ 3.81
VEGFA-226ENST00000611736 LTBP4Q8N2S1 1624 aa38.79■■■■□ 3.8
VEGFA-226ENST00000611736 RAB3GAP2Q9H2M9 1393 aa38.78■■■■□ 3.8
VEGFA-226ENST00000611736 TRPM2O94759 1503 aa38.74■■■■□ 3.79
VEGFA-226ENST00000611736 MPHOSPH9Q99550 1183 aa38.72■■■■□ 3.79
VEGFA-226ENST00000611736 CLTCL1P53675 1640 aa38.71■■■■□ 3.79
VEGFA-226ENST00000611736 FOXD1Q16676 465 aa38.71■■■■□ 3.79
VEGFA-226ENST00000611736 RIMS2Q9UQ26 1411 aa38.71■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms