RNA–Protein interactions for RNA: ENST00000611279.4

MTHFD1L-211, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene MTHFD1L, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-211ENST00000611279 TRIM44Q96DX7 344 aaPredicted RBP22.25■■□□□ 1.15
MTHFD1L-211ENST00000611279 SNAPC4Q5SXM2 1469 aa22.24■■□□□ 1.15
MTHFD1L-211ENST00000611279 EFCAB5A4FU69 1503 aa22.24■■□□□ 1.15
MTHFD1L-211ENST00000611279 SUPT6HQ7KZ85 1726 aaKnown RBP22.23■■□□□ 1.15
MTHFD1L-211ENST00000611279 KNSTRNQ9Y448 316 aa22.22■■□□□ 1.15
MTHFD1L-211ENST00000611279 PANK1Q8TE04 598 aa22.21■■□□□ 1.15
MTHFD1L-211ENST00000611279 KDM2BQ8NHM5 1336 aa22.21■■□□□ 1.15
MTHFD1L-211ENST00000611279 XRCC6P12956 609 aaKnown RBP eCLIP22.21■■□□□ 1.158e-6■□□□□ 11.3
MTHFD1L-211ENST00000611279 CLUAP1Q96AJ1 413 aa22.21■■□□□ 1.15
MTHFD1L-211ENST00000611279 IGHDP01880 384 aa22.21■■□□□ 1.15
MTHFD1L-211ENST00000611279 FANCD2Q9BXW9 1451 aa22.19■■□□□ 1.14
MTHFD1L-211ENST00000611279 BCL2L13Q9BXK5 485 aa22.19■■□□□ 1.14
MTHFD1L-211ENST00000611279 APAF1O14727 1248 aa22.19■■□□□ 1.14
MTHFD1L-211ENST00000611279 CDK13Q14004 1512 aaKnown RBP22.18■■□□□ 1.14
MTHFD1L-211ENST00000611279 EHBP1L1Q8N3D4 1523 aa22.18■■□□□ 1.14
MTHFD1L-211ENST00000611279 MYH16Q9H6N6 1097 aa22.18■■□□□ 1.14
MTHFD1L-211ENST00000611279 DUSP27Q5VZP5 1158 aa22.17■■□□□ 1.14
MTHFD1L-211ENST00000611279 MFAP1P55081 439 aaKnown RBP22.16■■□□□ 1.14
MTHFD1L-211ENST00000611279 DAPK1P53355 1430 aa22.16■■□□□ 1.14
MTHFD1L-211ENST00000611279 BCORL1Q5H9F3 1711 aa22.15■■□□□ 1.14
MTHFD1L-211ENST00000611279 TSPY4P0CV99 314 aa22.14■■□□□ 1.14
MTHFD1L-211ENST00000611279 TSPY10P0CW01 314 aa22.14■■□□□ 1.14
MTHFD1L-211ENST00000611279 HECW1Q76N89 1606 aa22.14■■□□□ 1.13
MTHFD1L-211ENST00000611279 FOXD4L1Q9NU39 408 aa22.13■■□□□ 1.13
MTHFD1L-211ENST00000611279 TNNT2P45379 298 aaPredicted RBP22.13■■□□□ 1.13
MTHFD1L-211ENST00000611279 MAGI3Q5TCQ9 1506 aa22.13■■□□□ 1.13
MTHFD1L-211ENST00000611279 UGGT2Q9NYU1 1516 aa22.13■■□□□ 1.13
MTHFD1L-211ENST00000611279 ABCC5O15440 1437 aa22.12■■□□□ 1.13
MTHFD1L-211ENST00000611279 TMF1P82094 1093 aa22.11■■□□□ 1.13
MTHFD1L-211ENST00000611279 TRAK2O60296 914 aa22.1■■□□□ 1.13
MTHFD1L-211ENST00000611279 KIAA1107Q9UPP5 1409 aa22.1■■□□□ 1.13
MTHFD1L-211ENST00000611279 TBC1D2Q9BYX2 928 aa22.1■■□□□ 1.13
MTHFD1L-211ENST00000611279 GRIN2BQ13224 1484 aa22.1■■□□□ 1.13
MTHFD1L-211ENST00000611279 SPINK5Q9NQ38 1064 aaPredicted RBP22.09■■□□□ 1.13
MTHFD1L-211ENST00000611279 RRP7AQ9Y3A4 280 aaKnown RBP22.09■■□□□ 1.13
MTHFD1L-211ENST00000611279 PLEKHH1Q9ULM0 1364 aa22.08■■□□□ 1.12
MTHFD1L-211ENST00000611279 FBLN2P98095 1184 aa22.08■■□□□ 1.12
MTHFD1L-211ENST00000611279 PER1O15534 1290 aaPredicted RBP22.07■■□□□ 1.12
MTHFD1L-211ENST00000611279 MCM4P33991 863 aa22.07■■□□□ 1.12
MTHFD1L-211ENST00000611279 POLA1P09884 1462 aaPredicted RBP22.07■■□□□ 1.12
MTHFD1L-211ENST00000611279 ZBTB7CA1YPR0 619 aa22.07■■□□□ 1.12
MTHFD1L-211ENST00000611279 PARD3Q8TEW0 1356 aa22.05■■□□□ 1.12
MTHFD1L-211ENST00000611279 PPP2R1AP30153 589 aa22.03■■□□□ 1.12
MTHFD1L-211ENST00000611279 ESPNB1AK53 854 aa22.03■■□□□ 1.12
MTHFD1L-211ENST00000611279 RRP9O43818 475 aaKnown RBP22.03■■□□□ 1.12
MTHFD1L-211ENST00000611279 RBM10P98175 930 aaKnown RBP22.03■■□□□ 1.12
MTHFD1L-211ENST00000611279 EPRSP07814 1512 aaKnown RBP22.02■■□□□ 1.12
MTHFD1L-211ENST00000611279 CLCN1P35523 988 aa22.02■■□□□ 1.12
MTHFD1L-211ENST00000611279 MAPK8IP3Q9UPT6 1336 aa22.02■■□□□ 1.12
MTHFD1L-211ENST00000611279 USP19O94966 1318 aa22.01■■□□□ 1.11
MTHFD1L-211ENST00000611279 CENPJQ9HC77 1338 aaPredicted RBP22.01■■□□□ 1.11
MTHFD1L-211ENST00000611279 HNRNPMP52272 730 aaKnown RBP eCLIP22.01■■□□□ 1.112e-10■■■■■ 44.9
MTHFD1L-211ENST00000611279 SLFN5Q08AF3 891 aa22.01■■□□□ 1.11
MTHFD1L-211ENST00000611279 ANKRD30AQ9BXX3 1397 aa22.01■■□□□ 1.11
MTHFD1L-211ENST00000611279 NCLP19338 710 aaKnown RBP22■■□□□ 1.11
MTHFD1L-211ENST00000611279 HSCBQ8IWL3 235 aa21.99■■□□□ 1.11
MTHFD1L-211ENST00000611279 GRPEL1Q9HAV7 217 aa21.99■■□□□ 1.11
MTHFD1L-211ENST00000611279 PDZRN3Q9UPQ7 1066 aa21.99■■□□□ 1.11
MTHFD1L-211ENST00000611279 TCOF1Q13428 1488 aaKnown RBP21.98■■□□□ 1.11
MTHFD1L-211ENST00000611279 DISP3Q9P2K9 1392 aa21.98■■□□□ 1.11
MTHFD1L-211ENST00000611279 MRE11P49959 708 aa21.98■■□□□ 1.11
MTHFD1L-211ENST00000611279 ANP32BQ92688 251 aaKnown RBP21.98■■□□□ 1.11
MTHFD1L-211ENST00000611279 TNNQ9UQP3 1299 aa21.98■■□□□ 1.11
MTHFD1L-211ENST00000611279 ROCK1Q13464 1354 aa21.98■■□□□ 1.11
MTHFD1L-211ENST00000611279 PZPP20742 1482 aa21.98■■□□□ 1.11
MTHFD1L-211ENST00000611279 ANKRD50Q9ULJ7 1429 aa21.98■■□□□ 1.11
MTHFD1L-211ENST00000611279 DMRT2Q9Y5R5 561 aa21.97■■□□□ 1.11
MTHFD1L-211ENST00000611279 CHMP5Q9NZZ3 219 aa21.96■■□□□ 1.11
MTHFD1L-211ENST00000611279 CGNL1Q0VF96 1302 aa21.96■■□□□ 1.11
MTHFD1L-211ENST00000611279 THOC2Q8NI27 1593 aaKnown RBP21.96■■□□□ 1.11
MTHFD1L-211ENST00000611279 GCC2Q8IWJ2 1684 aa21.95■■□□□ 1.11
MTHFD1L-211ENST00000611279 HSP90AB1P08238 724 aaKnown RBP21.95■■□□□ 1.1
MTHFD1L-211ENST00000611279 FAM13BQ9NYF5 915 aa21.95■■□□□ 1.1
MTHFD1L-211ENST00000611279 C22orf23Q9BZE7 217 aa21.94■■□□□ 1.1
MTHFD1L-211ENST00000611279 ABCA5Q8WWZ7 1642 aa21.94■■□□□ 1.1
MTHFD1L-211ENST00000611279 ABCA10Q8WWZ4 1543 aa21.94■■□□□ 1.1
MTHFD1L-211ENST00000611279 TOPBP1Q92547 1522 aa21.94■■□□□ 1.1
MTHFD1L-211ENST00000611279 GAPVD1Q14C86 1478 aa21.93■■□□□ 1.1
MTHFD1L-211ENST00000611279 FTSJ3Q8IY81 847 aaKnown RBP21.93■■□□□ 1.1
MTHFD1L-211ENST00000611279 E9PSI1 815 aa21.92■■□□□ 1.1
MTHFD1L-211ENST00000611279 TBC1D32Q96NH3 1257 aa21.91■■□□□ 1.1
MTHFD1L-211ENST00000611279 ANTXR1Q9H6X2 564 aa21.91■■□□□ 1.1
MTHFD1L-211ENST00000611279 KIAA1211Q6ZU35 1233 aa21.91■■□□□ 1.1
MTHFD1L-211ENST00000611279 PRG4Q92954 1404 aaPredicted RBP21.91■■□□□ 1.1
MTHFD1L-211ENST00000611279 KDM5CP41229 1560 aa21.91■■□□□ 1.1
MTHFD1L-211ENST00000611279 A0A0U1RQG5 324 aaPredicted RBP21.9■■□□□ 1.1
MTHFD1L-211ENST00000611279 PCDHB15Q9Y5E8 787 aa21.9■■□□□ 1.1
MTHFD1L-211ENST00000611279 PMFBP1Q8TBY8 1022 aa21.9■■□□□ 1.1
MTHFD1L-211ENST00000611279 PDS5BQ9NTI5 1447 aa21.89■■□□□ 1.1
MTHFD1L-211ENST00000611279 RALGAPBQ86X10 1494 aa21.89■■□□□ 1.09
MTHFD1L-211ENST00000611279 ERBB4Q15303 1308 aa21.89■■□□□ 1.09
MTHFD1L-211ENST00000611279 MSNP26038 577 aaKnown RBP21.89■■□□□ 1.09
MTHFD1L-211ENST00000611279 RWDD1Q9H446 243 aaPredicted RBP21.88■■□□□ 1.09
MTHFD1L-211ENST00000611279 LRRIQ1Q96JM4 1722 aa21.87■■□□□ 1.09
MTHFD1L-211ENST00000611279 PLEKHD1A6NEE1 506 aa21.86■■□□□ 1.09
MTHFD1L-211ENST00000611279 CTTNBP2Q8WZ74 1663 aa21.86■■□□□ 1.09
MTHFD1L-211ENST00000611279 TESK2Q96S53 571 aa21.86■■□□□ 1.09
MTHFD1L-211ENST00000611279 CCDC144AA2RUR9 1427 aa21.85■■□□□ 1.09
MTHFD1L-211ENST00000611279 DDX11L8A8MPP1 907 aa21.85■■□□□ 1.09
MTHFD1L-211ENST00000611279 URB2Q14146 1524 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms