RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ADAMTS12P58397 1594 aa27■■□□□ 1.91
SSBP3-216ENST00000610401 RGS3P49796 1198 aa26.99■■□□□ 1.91
SSBP3-216ENST00000610401 PBRM1Q86U86 1689 aa26.98■■□□□ 1.91
SSBP3-216ENST00000610401 BRD4O60885 1362 aaPredicted RBP26.97■■□□□ 1.91
SSBP3-216ENST00000610401 CCDC146Q8IYE0 955 aa26.97■■□□□ 1.91
SSBP3-216ENST00000610401 ADAMTS8Q9UP79 889 aa26.96■■□□□ 1.91
SSBP3-216ENST00000610401 KIAA0586Q9BVV6 1533 aa26.96■■□□□ 1.91
SSBP3-216ENST00000610401 C9orf84Q5VXU9 1444 aa26.96■■□□□ 1.91
SSBP3-216ENST00000610401 TCERG1O14776 1098 aaKnown RBP26.96■■□□□ 1.91
SSBP3-216ENST00000610401 BACH2Q9BYV9 841 aa26.95■■□□□ 1.91
SSBP3-216ENST00000610401 KIAA0556O60303 1618 aa26.93■■□□□ 1.9
SSBP3-216ENST00000610401 MBD5Q9P267 1494 aa26.93■■□□□ 1.9
SSBP3-216ENST00000610401 ANO8Q9HCE9 1232 aaPredicted RBP26.93■■□□□ 1.9
SSBP3-216ENST00000610401 KDM5CP41229 1560 aa26.92■■□□□ 1.9
SSBP3-216ENST00000610401 RAPGEF6Q8TEU7 1601 aa26.92■■□□□ 1.9
SSBP3-216ENST00000610401 LRPPRCP42704 1394 aaKnown RBP26.91■■□□□ 1.9
SSBP3-216ENST00000610401 DISP3Q9P2K9 1392 aa26.91■■□□□ 1.9
SSBP3-216ENST00000610401 DAXXQ9UER7 740 aaPredicted RBP26.9■■□□□ 1.9
SSBP3-216ENST00000610401 PER1O15534 1290 aaPredicted RBP26.89■■□□□ 1.9
SSBP3-216ENST00000610401 ARID4BQ4LE39 1312 aaPredicted RBP26.89■■□□□ 1.9
SSBP3-216ENST00000610401 SENP3Q9H4L4 574 aaPredicted RBP26.88■■□□□ 1.89
SSBP3-216ENST00000610401 WDR43Q15061 677 aaKnown RBP eCLIP26.87■■□□□ 1.89
SSBP3-216ENST00000610401 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
SSBP3-216ENST00000610401 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.86■■□□□ 1.89
SSBP3-216ENST00000610401 CCDC144AA2RUR9 1427 aa26.85■■□□□ 1.89
SSBP3-216ENST00000610401 RALGAPBQ86X10 1494 aa26.85■■□□□ 1.89
SSBP3-216ENST00000610401 MRC2Q9UBG0 1479 aa26.85■■□□□ 1.89
SSBP3-216ENST00000610401 KNSTRNQ9Y448 316 aa26.81■■□□□ 1.88
SSBP3-216ENST00000610401 TMF1P82094 1093 aa26.81■■□□□ 1.88
SSBP3-216ENST00000610401 NEUROD2Q15784 382 aa26.81■■□□□ 1.88
SSBP3-216ENST00000610401 TNNT2P45379 298 aaPredicted RBP26.8■■□□□ 1.88
SSBP3-216ENST00000610401 TESK2Q96S53 571 aa26.79■■□□□ 1.88
SSBP3-216ENST00000610401 CARMIL2Q6F5E8 1435 aa26.77■■□□□ 1.88
SSBP3-216ENST00000610401 PDE3BQ13370 1112 aa26.77■■□□□ 1.88
SSBP3-216ENST00000610401 PARD3Q8TEW0 1356 aa26.76■■□□□ 1.87
SSBP3-216ENST00000610401 BRPF3Q9ULD4 1205 aa26.76■■□□□ 1.87
SSBP3-216ENST00000610401 UHRF1BP1Q6BDS2 1440 aa26.74■■□□□ 1.87
SSBP3-216ENST00000610401 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
SSBP3-216ENST00000610401 ARXQ96QS3 562 aa26.72■■□□□ 1.87
SSBP3-216ENST00000610401 BCAR3O75815 825 aa26.72■■□□□ 1.87
SSBP3-216ENST00000610401 POLR1AO95602 1720 aaPredicted RBP26.72■■□□□ 1.87
SSBP3-216ENST00000610401 ATP10BO94823 1461 aa26.71■■□□□ 1.87
SSBP3-216ENST00000610401 IFT140Q96RY7 1462 aa26.71■■□□□ 1.87
SSBP3-216ENST00000610401 SPINK5Q9NQ38 1064 aaPredicted RBP26.7■■□□□ 1.87
SSBP3-216ENST00000610401 MAGI1Q96QZ7 1491 aaPredicted RBP26.7■■□□□ 1.87
SSBP3-216ENST00000610401 APAF1O14727 1248 aa26.7■■□□□ 1.86
SSBP3-216ENST00000610401 PPP2R1AP30153 589 aa26.69■■□□□ 1.86
SSBP3-216ENST00000610401 PRAG1Q86YV5 1406 aa26.69■■□□□ 1.86
SSBP3-216ENST00000610401 PLEKHH1Q9ULM0 1364 aa26.68■■□□□ 1.86
SSBP3-216ENST00000610401 ADGRL2O95490 1459 aa26.68■■□□□ 1.86
SSBP3-216ENST00000610401 NFKBIBQ15653 356 aa26.68■■□□□ 1.86
SSBP3-216ENST00000610401 MS4A1P11836 297 aa26.67■■□□□ 1.86
SSBP3-216ENST00000610401 GOLGA2Q08379 1002 aa26.65■■□□□ 1.86
SSBP3-216ENST00000610401 CANXP27824 592 aaKnown RBP26.65■■□□□ 1.86
SSBP3-216ENST00000610401 FRAT1Q92837 279 aaPredicted RBP26.65■■□□□ 1.86
SSBP3-216ENST00000610401 DUSP27Q5VZP5 1158 aa26.64■■□□□ 1.86
SSBP3-216ENST00000610401 PPM1GO15355 546 aaPredicted RBP26.64■■□□□ 1.86
SSBP3-216ENST00000610401 RRP7AQ9Y3A4 280 aaKnown RBP26.64■■□□□ 1.86
SSBP3-216ENST00000610401 ERBINQ96RT1 1412 aa26.64■■□□□ 1.85
SSBP3-216ENST00000610401 CEP170Q5SW79 1584 aa26.63■■□□□ 1.85
SSBP3-216ENST00000610401 DMRT2Q9Y5R5 561 aa26.62■■□□□ 1.85
SSBP3-216ENST00000610401 BCL2L13Q9BXK5 485 aa26.61■■□□□ 1.85
SSBP3-216ENST00000610401 FAM135AQ9P2D6 1515 aa26.6■■□□□ 1.85
SSBP3-216ENST00000610401 ADGBQ8N7X0 1667 aa26.6■■□□□ 1.85
SSBP3-216ENST00000610401 EIF4G3O43432 1585 aaKnown RBP26.6■■□□□ 1.85
SSBP3-216ENST00000610401 FRAT2O75474 233 aaPredicted RBP26.6■■□□□ 1.85
SSBP3-216ENST00000610401 PLEKHH2Q8IVE3 1493 aa26.6■■□□□ 1.85
SSBP3-216ENST00000610401 PTPRGP23470 1445 aa26.6■■□□□ 1.85
SSBP3-216ENST00000610401 ITSN2Q9NZM3 1697 aa26.59■■□□□ 1.85
SSBP3-216ENST00000610401 CHGAP10645 457 aaKnown RBP26.58■■□□□ 1.85
SSBP3-216ENST00000610401 DDRGK1Q96HY6 314 aa26.58■■□□□ 1.85
SSBP3-216ENST00000610401 A2MP01023 1474 aa26.58■■□□□ 1.85
SSBP3-216ENST00000610401 PLA2R1Q13018 1463 aa26.56■■□□□ 1.84
SSBP3-216ENST00000610401 SPRYD3Q8NCJ5 442 aa26.56■■□□□ 1.84
SSBP3-216ENST00000610401 PANK1Q8TE04 598 aa26.56■■□□□ 1.84
SSBP3-216ENST00000610401 SLKQ9H2G2 1235 aaPredicted RBP26.56■■□□□ 1.84
SSBP3-216ENST00000610401 COG6Q9Y2V7 657 aa26.56■■□□□ 1.84
SSBP3-216ENST00000610401 FAM161AQ3B820 660 aa26.54■■□□□ 1.84
SSBP3-216ENST00000610401 CENPQQ7L2Z9 268 aaPredicted RBP26.54■■□□□ 1.84
SSBP3-216ENST00000610401 AFAP1Q8N556 730 aa26.54■■□□□ 1.84
SSBP3-216ENST00000610401 GSE1Q14687 1217 aa26.54■■□□□ 1.84
SSBP3-216ENST00000610401 C8orf34Q49A92 452 aa26.54■■□□□ 1.84
SSBP3-216ENST00000610401 ARHGEF12Q9NZN5 1544 aa26.53■■□□□ 1.84
SSBP3-216ENST00000610401 CLUAP1Q96AJ1 413 aa26.53■■□□□ 1.84
SSBP3-216ENST00000610401 ABCC10Q5T3U5 1492 aa26.53■■□□□ 1.84
SSBP3-216ENST00000610401 IGHDP01880 384 aa26.52■■□□□ 1.84
SSBP3-216ENST00000610401 EIF5BO60841 1220 aaKnown RBP26.51■■□□□ 1.83
SSBP3-216ENST00000610401 AMER1Q5JTC6 1135 aaPredicted RBP26.51■■□□□ 1.83
SSBP3-216ENST00000610401 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.51■■□□□ 1.83
SSBP3-216ENST00000610401 CDC42BPAQ5VT25 1732 aa26.51■■□□□ 1.83
SSBP3-216ENST00000610401 SYNJ2O15056 1496 aa26.51■■□□□ 1.83
SSBP3-216ENST00000610401 KDM5DQ9BY66 1539 aa26.5■■□□□ 1.83
SSBP3-216ENST00000610401 KDM2BQ8NHM5 1336 aa26.49■■□□□ 1.83
SSBP3-216ENST00000610401 CCDC141Q6ZP82 1450 aa26.49■■□□□ 1.83
SSBP3-216ENST00000610401 SEC24BO95487 1268 aa26.48■■□□□ 1.83
SSBP3-216ENST00000610401 CFAP70Q5T0N1 1121 aa26.48■■□□□ 1.83
SSBP3-216ENST00000610401 COL17A1Q9UMD9 1497 aaPredicted RBP26.48■■□□□ 1.83
SSBP3-216ENST00000610401 ARHGAP5Q13017 1502 aa26.48■■□□□ 1.83
SSBP3-216ENST00000610401 MAGI2Q86UL8 1455 aa26.48■■□□□ 1.83
SSBP3-216ENST00000610401 TNNQ9UQP3 1299 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms