RNA–Protein interactions for RNA: ENST00000609293.1

LINC01990-201, Transcript of long intergenic non-protein coding RNA 1990, humanhuman

TSL 1 (best) BASIC

Gene LINC01990, Length 1,487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01990-201ENST00000609293 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
LINC01990-201ENST00000609293 SHROOM2Q13796 1616 aa13.76□□□□□ -0.21
LINC01990-201ENST00000609293 RNF166Q96A37 237 aaPredicted RBP13.75□□□□□ -0.21
LINC01990-201ENST00000609293 NUP160Q12769 1436 aa13.74□□□□□ -0.21
LINC01990-201ENST00000609293 PTGER2P43116 358 aa13.73□□□□□ -0.21
LINC01990-201ENST00000609293 WRNQ14191 1432 aaPredicted RBP eCLIP13.71□□□□□ -0.21
LINC01990-201ENST00000609293 SLC34A2O95436 690 aa13.71□□□□□ -0.21
LINC01990-201ENST00000609293 KHSRPQ92945 711 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC01990-201ENST00000609293 MYT1LQ9UL68 1186 aa13.7□□□□□ -0.22
LINC01990-201ENST00000609293 BIVM-ERCC5R4GMW8 1640 aa13.7□□□□□ -0.22
LINC01990-201ENST00000609293 FHAD1B1AJZ9 1412 aa13.69□□□□□ -0.22
LINC01990-201ENST00000609293 TOP2BQ02880 1626 aa13.67□□□□□ -0.22
LINC01990-201ENST00000609293 ERICH3Q5RHP9 1530 aa13.67□□□□□ -0.22
LINC01990-201ENST00000609293 PCDHGA4Q9Y5G9 962 aa13.66□□□□□ -0.22
LINC01990-201ENST00000609293 NUDT7P0C024 238 aa13.65□□□□□ -0.22
LINC01990-201ENST00000609293 HS6ST3Q8IZP7 471 aa13.65□□□□□ -0.22
LINC01990-201ENST00000609293 PRG4Q92954 1404 aaPredicted RBP13.64□□□□□ -0.23
LINC01990-201ENST00000609293 PBX2P40425 430 aa13.64□□□□□ -0.23
LINC01990-201ENST00000609293 PPP1R37O75864 691 aa13.63□□□□□ -0.23
LINC01990-201ENST00000609293 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
LINC01990-201ENST00000609293 RUSC2Q8N2Y8 1516 aa13.6□□□□□ -0.23
LINC01990-201ENST00000609293 ABCC10Q5T3U5 1492 aa13.6□□□□□ -0.23
LINC01990-201ENST00000609293 PSDA5PKW4 1024 aaPredicted RBP13.6□□□□□ -0.23
LINC01990-201ENST00000609293 LSM11P83369 360 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC01990-201ENST00000609293 DIP2BQ9P265 1576 aa13.6□□□□□ -0.23
LINC01990-201ENST00000609293 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
LINC01990-201ENST00000609293 MAPKBP1O60336 1514 aa13.59□□□□□ -0.23
LINC01990-201ENST00000609293 TSPOAP1O95153 1857 aa13.58□□□□□ -0.23
LINC01990-201ENST00000609293 FAM69CQ0P6D2 419 aa13.58□□□□□ -0.24
LINC01990-201ENST00000609293 JPH4Q96JJ6 628 aa13.58□□□□□ -0.24
LINC01990-201ENST00000609293 KDM6BO15054 1643 aa13.57□□□□□ -0.24
LINC01990-201ENST00000609293 RYDENQ9NUL5 291 aaKnown RBP13.57□□□□□ -0.24
LINC01990-201ENST00000609293 ADCY10Q96PN6 1610 aa13.56□□□□□ -0.24
LINC01990-201ENST00000609293 CHGAP10645 457 aaKnown RBP13.55□□□□□ -0.24
LINC01990-201ENST00000609293 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
LINC01990-201ENST00000609293 FOXK1P85037 733 aa13.54□□□□□ -0.24
LINC01990-201ENST00000609293 GPHNQ9NQX3 736 aaPredicted RBP13.54□□□□□ -0.24
LINC01990-201ENST00000609293 PTCD2Q8WV60 388 aaKnown RBP13.53□□□□□ -0.24
LINC01990-201ENST00000609293 TBC1D12O60347 775 aa13.52□□□□□ -0.25
LINC01990-201ENST00000609293 PLPP6Q8IY26 295 aa13.51□□□□□ -0.25
LINC01990-201ENST00000609293 KDM4FA0A1W2PPD8 638 aa13.48□□□□□ -0.25
LINC01990-201ENST00000609293 ARHGAP33O14559 1287 aa13.47□□□□□ -0.25
LINC01990-201ENST00000609293 CUL7Q14999 1698 aa13.46□□□□□ -0.25
LINC01990-201ENST00000609293 KIAA0586Q9BVV6 1533 aa13.46□□□□□ -0.26
LINC01990-201ENST00000609293 AXIN2Q9Y2T1 843 aa13.45□□□□□ -0.26
LINC01990-201ENST00000609293 DSG2Q14126 1118 aa13.44□□□□□ -0.26
LINC01990-201ENST00000609293 PPP4R3BQ5MIZ7 849 aa13.42□□□□□ -0.26
LINC01990-201ENST00000609293 POTEEQ6S8J3 1075 aa13.42□□□□□ -0.26
LINC01990-201ENST00000609293 PPRC1Q5VV67 1664 aaKnown RBP13.4□□□□□ -0.26
LINC01990-201ENST00000609293 ADGRD1Q6QNK2 874 aa13.39□□□□□ -0.27
LINC01990-201ENST00000609293 KCNH8Q96L42 1107 aa13.39□□□□□ -0.27
LINC01990-201ENST00000609293 TK2O00142 265 aa13.38□□□□□ -0.27
LINC01990-201ENST00000609293 PTPRGP23470 1445 aa13.38□□□□□ -0.27
LINC01990-201ENST00000609293 KIF27Q86VH2 1401 aa13.37□□□□□ -0.27
LINC01990-201ENST00000609293 ABCC2Q92887 1545 aa13.37□□□□□ -0.27
LINC01990-201ENST00000609293 TTBK1Q5TCY1 1321 aaPredicted RBP13.37□□□□□ -0.27
LINC01990-201ENST00000609293 GLI2P10070 1586 aa13.37□□□□□ -0.27
LINC01990-201ENST00000609293 NKX1-1Q15270 411 aaPredicted RBP13.36□□□□□ -0.27
LINC01990-201ENST00000609293 IGF1RP08069 1367 aa13.36□□□□□ -0.27
LINC01990-201ENST00000609293 ADGRL1O94910 1474 aa13.35□□□□□ -0.27
LINC01990-201ENST00000609293 PLB1Q6P1J6 1458 aa13.35□□□□□ -0.27
LINC01990-201ENST00000609293 CARMIL2Q6F5E8 1435 aa13.35□□□□□ -0.27
LINC01990-201ENST00000609293 ASXL2Q76L83 1435 aa13.34□□□□□ -0.27
LINC01990-201ENST00000609293 HCSTQ9UBK5 93 aa13.34□□□□□ -0.27
LINC01990-201ENST00000609293 TNIKQ9UKE5 1360 aa13.34□□□□□ -0.27
LINC01990-201ENST00000609293 IQGAP2Q13576 1575 aa13.33□□□□□ -0.28
LINC01990-201ENST00000609293 STAC3Q96MF2 364 aa13.33□□□□□ -0.28
LINC01990-201ENST00000609293 PDE4AP27815 886 aa13.32□□□□□ -0.28
LINC01990-201ENST00000609293 OXER1Q8TDS5 423 aa13.32□□□□□ -0.28
LINC01990-201ENST00000609293 CRISPLD2Q9H0B8 497 aa13.32□□□□□ -0.28
LINC01990-201ENST00000609293 MAP3K4Q9Y6R4 1608 aa13.31□□□□□ -0.28
LINC01990-201ENST00000609293 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
LINC01990-201ENST00000609293 UHRF1BP1LA0JNW5 1464 aa13.3□□□□□ -0.28
LINC01990-201ENST00000609293 PSEN2P49810 448 aa13.29□□□□□ -0.28
LINC01990-201ENST00000609293 CARMIL1Q5VZK9 1371 aa13.29□□□□□ -0.28
LINC01990-201ENST00000609293 HECW2Q9P2P5 1572 aa13.28□□□□□ -0.28
LINC01990-201ENST00000609293 DMRTA1Q5VZB9 504 aa13.28□□□□□ -0.28
LINC01990-201ENST00000609293 UPF1Q92900 1129 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC01990-201ENST00000609293 ZCCHC11Q5TAX3 1644 aaKnown RBP13.27□□□□□ -0.28
LINC01990-201ENST00000609293 UACAQ9BZF9 1416 aa13.27□□□□□ -0.28
LINC01990-201ENST00000609293 TEX14Q8IWB6 1497 aa13.27□□□□□ -0.29
LINC01990-201ENST00000609293 EPRSP07814 1512 aaKnown RBP13.27□□□□□ -0.29
LINC01990-201ENST00000609293 HRO43593 1189 aa13.25□□□□□ -0.29
LINC01990-201ENST00000609293 KCNK17Q96T54 332 aa13.25□□□□□ -0.29
LINC01990-201ENST00000609293 COL17A1Q9UMD9 1497 aaPredicted RBP13.25□□□□□ -0.29
LINC01990-201ENST00000609293 KDM5BQ9UGL1 1544 aa13.25□□□□□ -0.29
LINC01990-201ENST00000609293 DISP1Q96F81 1524 aa13.24□□□□□ -0.29
LINC01990-201ENST00000609293 ZNF454Q8N9F8 522 aa13.23□□□□□ -0.29
LINC01990-201ENST00000609293 KIAA0556O60303 1618 aa13.21□□□□□ -0.29
LINC01990-201ENST00000609293 GTPBP6O43824 516 aaPredicted RBP13.21□□□□□ -0.3
LINC01990-201ENST00000609293 PLA2G2EQ9NZK7 142 aa13.21□□□□□ -0.3
LINC01990-201ENST00000609293 UGGT2Q9NYU1 1516 aa13.2□□□□□ -0.3
LINC01990-201ENST00000609293 NCKAP5LQ9HCH0 1330 aa13.2□□□□□ -0.3
LINC01990-201ENST00000609293 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
LINC01990-201ENST00000609293 CFAP43Q8NDM7 1665 aa13.19□□□□□ -0.3
LINC01990-201ENST00000609293 DDX27Q96GQ7 796 aaKnown RBP13.18□□□□□ -0.3
LINC01990-201ENST00000609293 WDR7Q9Y4E6 1490 aa13.18□□□□□ -0.3
LINC01990-201ENST00000609293 LARP6Q9BRS8 491 aaKnown RBP13.17□□□□□ -0.3
LINC01990-201ENST00000609293 SLC4A5Q9BY07 1137 aa13.17□□□□□ -0.3
LINC01990-201ENST00000609293 CTTNBP2Q8WZ74 1663 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms