RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 RALBP1Q15311 655 aa19.76■□□□□ 0.75
CTCFL-219ENST00000608720 ST20-MTHFSA0A0A6YYL1 179 aa19.76■□□□□ 0.75
CTCFL-219ENST00000608720 RSPH4AQ5TD94 716 aa19.75■□□□□ 0.75
CTCFL-219ENST00000608720 KDM2AQ9Y2K7 1162 aa19.75■□□□□ 0.75
CTCFL-219ENST00000608720 ARHGEF5Q12774 1597 aa19.75■□□□□ 0.75
CTCFL-219ENST00000608720 DEKP35659 375 aaKnown RBP19.75■□□□□ 0.75
CTCFL-219ENST00000608720 HNRNPMP52272 730 aaKnown RBP eCLIP19.75■□□□□ 0.75
CTCFL-219ENST00000608720 DCAF11Q8TEB1 546 aa19.75■□□□□ 0.75
CTCFL-219ENST00000608720 DNAJC5Q9H3Z4 198 aa19.74■□□□□ 0.75
CTCFL-219ENST00000608720 BRD4O60885 1362 aaPredicted RBP19.74■□□□□ 0.75
CTCFL-219ENST00000608720 MYBBP1AQ9BQG0 1328 aaKnown RBP19.73■□□□□ 0.75
CTCFL-219ENST00000608720 LRPPRCP42704 1394 aaKnown RBP19.72■□□□□ 0.75
CTCFL-219ENST00000608720 CCDC141Q6ZP82 1450 aa19.69■□□□□ 0.74
CTCFL-219ENST00000608720 CCDC136Q96JN2 1154 aa19.69■□□□□ 0.74
CTCFL-219ENST00000608720 FAM135AQ9P2D6 1515 aa19.66■□□□□ 0.74
CTCFL-219ENST00000608720 CCDC144AA2RUR9 1427 aa19.64■□□□□ 0.73
CTCFL-219ENST00000608720 PRAG1Q86YV5 1406 aa19.64■□□□□ 0.73
CTCFL-219ENST00000608720 NLRP13Q86W25 1043 aa19.63■□□□□ 0.73
CTCFL-219ENST00000608720 SAMD9LQ8IVG5 1584 aa19.61■□□□□ 0.73
CTCFL-219ENST00000608720 GPRASP1Q5JY77 1395 aa19.6■□□□□ 0.73
CTCFL-219ENST00000608720 PARD3Q8TEW0 1356 aa19.6■□□□□ 0.73
CTCFL-219ENST00000608720 PDE3BQ13370 1112 aa19.6■□□□□ 0.73
CTCFL-219ENST00000608720 E9PCH4 1651 aa19.59■□□□□ 0.73
CTCFL-219ENST00000608720 WASHC2CQ9Y4E1 1318 aa19.59■□□□□ 0.73
CTCFL-219ENST00000608720 PREX2Q70Z35 1606 aa19.59■□□□□ 0.73
CTCFL-219ENST00000608720 ERCC6L2Q5T890 1561 aa19.58■□□□□ 0.72
CTCFL-219ENST00000608720 PER1O15534 1290 aaPredicted RBP19.57■□□□□ 0.72
CTCFL-219ENST00000608720 NOP58Q9Y2X3 529 aaKnown RBP19.57■□□□□ 0.72
CTCFL-219ENST00000608720 SENP3-EIF4A1A0A087X0R7 540 aa19.56■□□□□ 0.72
CTCFL-219ENST00000608720 RRP1P56182 461 aaKnown RBP19.56■□□□□ 0.72
CTCFL-219ENST00000608720 CYB5RLQ6IPT4 315 aa19.56■□□□□ 0.72
CTCFL-219ENST00000608720 MAST1Q9Y2H9 1570 aa19.56■□□□□ 0.72
CTCFL-219ENST00000608720 TRPM1Q7Z4N2 1603 aa19.56■□□□□ 0.72
CTCFL-219ENST00000608720 RGL3Q3MIN7 710 aa19.56■□□□□ 0.72
CTCFL-219ENST00000608720 CLASP1Q7Z460 1538 aa19.56■□□□□ 0.72
CTCFL-219ENST00000608720 PLA2R1Q13018 1463 aa19.56■□□□□ 0.72
CTCFL-219ENST00000608720 NBPF1Q3BBV0 1214 aa19.55■□□□□ 0.72
CTCFL-219ENST00000608720 CDC42BPBQ9Y5S2 1711 aa19.55■□□□□ 0.72
CTCFL-219ENST00000608720 RCAN3Q9UKA8 241 aa19.54■□□□□ 0.72
CTCFL-219ENST00000608720 INSRP06213 1382 aa19.54■□□□□ 0.72
CTCFL-219ENST00000608720 UNC13BO14795 1591 aa19.53■□□□□ 0.72
CTCFL-219ENST00000608720 A2MP01023 1474 aa19.53■□□□□ 0.72
CTCFL-219ENST00000608720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.52■□□□□ 0.721e-10■□□□□ 8.3
CTCFL-219ENST00000608720 PLEKHH2Q8IVE3 1493 aa19.52■□□□□ 0.72
CTCFL-219ENST00000608720 SYCP2Q9BX26 1530 aa19.52■□□□□ 0.72
CTCFL-219ENST00000608720 COL17A1Q9UMD9 1497 aaPredicted RBP19.52■□□□□ 0.71
CTCFL-219ENST00000608720 ARHGAP5Q13017 1502 aa19.51■□□□□ 0.71
CTCFL-219ENST00000608720 ANP32AP39687 249 aaKnown RBP19.51■□□□□ 0.71
CTCFL-219ENST00000608720 TESK2Q96S53 571 aa19.51■□□□□ 0.71
CTCFL-219ENST00000608720 LAMC1P11047 1609 aa19.51■□□□□ 0.71
CTCFL-219ENST00000608720 ATP10AO60312 1499 aa19.49■□□□□ 0.71
CTCFL-219ENST00000608720 SHROOM2Q13796 1616 aa19.49■□□□□ 0.71
CTCFL-219ENST00000608720 PRDM15P57071 1507 aaPredicted RBP19.49■□□□□ 0.71
CTCFL-219ENST00000608720 TMF1P82094 1093 aa19.48■□□□□ 0.71
CTCFL-219ENST00000608720 ZMYM4Q5VZL5 1548 aa19.48■□□□□ 0.71
CTCFL-219ENST00000608720 IPO9Q96P70 1041 aaKnown RBP19.48■□□□□ 0.71
CTCFL-219ENST00000608720 ERBINQ96RT1 1412 aa19.47■□□□□ 0.71
CTCFL-219ENST00000608720 EXOC6Q8TAG9 804 aa19.47■□□□□ 0.71
CTCFL-219ENST00000608720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.47■□□□□ 0.71
CTCFL-219ENST00000608720 PLXNC1O60486 1568 aa19.47■□□□□ 0.71
CTCFL-219ENST00000608720 DISP3Q9P2K9 1392 aa19.47■□□□□ 0.71
CTCFL-219ENST00000608720 PANK3Q9H999 370 aa19.47■□□□□ 0.71
CTCFL-219ENST00000608720 RIMBP3CA6NJZ7 1639 aa19.46■□□□□ 0.71
CTCFL-219ENST00000608720 RIMBP3BA6NNM3 1639 aa19.46■□□□□ 0.71
CTCFL-219ENST00000608720 IQGAP3Q86VI3 1631 aa19.46■□□□□ 0.71
CTCFL-219ENST00000608720 EIF2AK4Q9P2K8 1649 aaKnown RBP19.46■□□□□ 0.71
CTCFL-219ENST00000608720 RIMBP3Q9UFD9 1639 aa19.46■□□□□ 0.71
CTCFL-219ENST00000608720 DUOX2Q9NRD8 1548 aa19.46■□□□□ 0.71
CTCFL-219ENST00000608720 SALL2Q9Y467 1007 aaPredicted RBP19.45■□□□□ 0.7
CTCFL-219ENST00000608720 TTC37Q6PGP7 1564 aa19.45■□□□□ 0.7
CTCFL-219ENST00000608720 TCERG1O14776 1098 aaKnown RBP19.45■□□□□ 0.7
CTCFL-219ENST00000608720 CC2D1BQ5T0F9 858 aaKnown RBP19.44■□□□□ 0.7
CTCFL-219ENST00000608720 MAGI2Q86UL8 1455 aa19.43■□□□□ 0.7
CTCFL-219ENST00000608720 BLMP54132 1417 aaPredicted RBP19.43■□□□□ 0.7
CTCFL-219ENST00000608720 PAK3O75914 559 aaPredicted RBP19.43■□□□□ 0.7
CTCFL-219ENST00000608720 ANO8Q9HCE9 1232 aaPredicted RBP19.42■□□□□ 0.7
CTCFL-219ENST00000608720 CDCA7LQ96GN5 454 aa19.4■□□□□ 0.7
CTCFL-219ENST00000608720 ZBTB47Q9UFB7 747 aaPredicted RBP19.4■□□□□ 0.7
CTCFL-219ENST00000608720 ABCC2Q92887 1545 aa19.39■□□□□ 0.7
CTCFL-219ENST00000608720 EFCAB2Q5VUJ9 269 aa19.39■□□□□ 0.69
CTCFL-219ENST00000608720 PLCH2O75038 1416 aa19.38■□□□□ 0.69
CTCFL-219ENST00000608720 MS4A1P11836 297 aa19.38■□□□□ 0.69
CTCFL-219ENST00000608720 STAC3Q96MF2 364 aa19.37■□□□□ 0.69
CTCFL-219ENST00000608720 RTL5Q5HYW3 569 aaPredicted RBP19.36■□□□□ 0.69
CTCFL-219ENST00000608720 MYO5CQ9NQX4 1742 aa19.36■□□□□ 0.69
CTCFL-219ENST00000608720 NBR1Q14596 966 aa19.35■□□□□ 0.69
CTCFL-219ENST00000608720 CDCA8Q53HL2 280 aa19.34■□□□□ 0.69
CTCFL-219ENST00000608720 PDE4AP27815 886 aa19.33■□□□□ 0.68
CTCFL-219ENST00000608720 KNSTRNQ9Y448 316 aa19.33■□□□□ 0.68
CTCFL-219ENST00000608720 RNF17Q9BXT8 1623 aaKnown RBP19.32■□□□□ 0.68
CTCFL-219ENST00000608720 BACH2Q9BYV9 841 aa19.31■□□□□ 0.68
CTCFL-219ENST00000608720 ADAMTS8Q9UP79 889 aa19.31■□□□□ 0.68
CTCFL-219ENST00000608720 WDR7Q9Y4E6 1490 aa19.3■□□□□ 0.68
CTCFL-219ENST00000608720 PLIN1O60240 522 aa19.29■□□□□ 0.68
CTCFL-219ENST00000608720 PPP2R1AP30153 589 aa19.29■□□□□ 0.68
CTCFL-219ENST00000608720 CRBNQ96SW2 442 aa19.28■□□□□ 0.68
CTCFL-219ENST00000608720 SCAPERQ9BY12 1400 aa19.28■□□□□ 0.68
CTCFL-219ENST00000608720 TRAPPC8Q9Y2L5 1435 aa19.28■□□□□ 0.68
CTCFL-219ENST00000608720 WDR43Q15061 677 aaKnown RBP eCLIP19.28■□□□□ 0.68
CTCFL-219ENST00000608720 ABCC1P33527 1531 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms