RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 NISCHQ9Y2I1 1504 aa29.94■■■□□ 2.38
CTCFL-219ENST00000608720 SHROOM4Q9ULL8 1493 aa25.5■■□□□ 1.67
CTCFL-219ENST00000608720 CCDC180Q9P1Z9 1646 aa25.37■■□□□ 1.65
CTCFL-219ENST00000608720 ZCCHC6Q5VYS8 1495 aaKnown RBP25.36■■□□□ 1.65
CTCFL-219ENST00000608720 SUPT5HO00267 1087 aaKnown RBP25.14■■□□□ 1.61
CTCFL-219ENST00000608720 DCAF8L2P0C7V8 631 aa24.7■■□□□ 1.54
CTCFL-219ENST00000608720 DCAF1Q9Y4B6 1507 aa24.64■■□□□ 1.54
CTCFL-219ENST00000608720 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
CTCFL-219ENST00000608720 ABCC9O60706 1549 aa24.49■■□□□ 1.51
CTCFL-219ENST00000608720 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
CTCFL-219ENST00000608720 HRCP23327 699 aa24.1■■□□□ 1.45
CTCFL-219ENST00000608720 PCGF6Q9BYE7 350 aa23.92■■□□□ 1.42
CTCFL-219ENST00000608720 LOC105371045A0A1W2PR82 267 aa23.79■■□□□ 1.4
CTCFL-219ENST00000608720 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
CTCFL-219ENST00000608720 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
CTCFL-219ENST00000608720 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
CTCFL-219ENST00000608720 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
CTCFL-219ENST00000608720 PELP1Q8IZL8 1130 aaKnown RBP23.52■■□□□ 1.36
CTCFL-219ENST00000608720 NACADO15069 1562 aa23.51■■□□□ 1.35
CTCFL-219ENST00000608720 TRIM41Q8WV44 630 aa23.48■■□□□ 1.35
CTCFL-219ENST00000608720 PPARGC1BQ86YN6 1023 aaKnown RBP23.43■■□□□ 1.34
CTCFL-219ENST00000608720 CECR2Q9BXF3 1484 aa23.29■■□□□ 1.32
CTCFL-219ENST00000608720 MROH2BQ7Z745 1585 aa23.24■■□□□ 1.31
CTCFL-219ENST00000608720 FAM9AQ8IZU1 332 aaPredicted RBP23.18■■□□□ 1.3
CTCFL-219ENST00000608720 ZEB1P37275 1124 aaPredicted RBP23.17■■□□□ 1.3
CTCFL-219ENST00000608720 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
CTCFL-219ENST00000608720 WIZO95785 1651 aa23.06■■□□□ 1.28
CTCFL-219ENST00000608720 BAZ1AQ9NRL2 1556 aaPredicted RBP23■■□□□ 1.27
CTCFL-219ENST00000608720 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.26
CTCFL-219ENST00000608720 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
CTCFL-219ENST00000608720 EIF4G1Q04637 1599 aaKnown RBP22.86■■□□□ 1.25
CTCFL-219ENST00000608720 TOP2AP11388 1531 aaKnown RBP22.8■■□□□ 1.24
CTCFL-219ENST00000608720 BICRAQ9NZM4 1560 aa22.75■■□□□ 1.23
CTCFL-219ENST00000608720 MYT1Q01538 1121 aa22.74■■□□□ 1.23
CTCFL-219ENST00000608720 SMARCA4P51532 1647 aa22.73■■□□□ 1.23
CTCFL-219ENST00000608720 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
CTCFL-219ENST00000608720 SMARCA2P51531 1590 aa22.65■■□□□ 1.22
CTCFL-219ENST00000608720 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
CTCFL-219ENST00000608720 SCAF1Q9H7N4 1312 aaKnown RBP22.59■■□□□ 1.21
CTCFL-219ENST00000608720 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
CTCFL-219ENST00000608720 EEA1Q15075 1411 aa22.53■■□□□ 1.2
CTCFL-219ENST00000608720 TNIKQ9UKE5 1360 aa22.51■■□□□ 1.19
CTCFL-219ENST00000608720 SOGA1O94964 1423 aa22.48■■□□□ 1.19
CTCFL-219ENST00000608720 CEP162Q5TB80 1403 aa22.48■■□□□ 1.19
CTCFL-219ENST00000608720 CCER1Q8TC90 406 aaPredicted RBP22.47■■□□□ 1.19
CTCFL-219ENST00000608720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.46■■□□□ 1.19
CTCFL-219ENST00000608720 CSRNP3Q8WYN3 585 aa22.46■■□□□ 1.19
CTCFL-219ENST00000608720 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
CTCFL-219ENST00000608720 PEG3Q9GZU2 1588 aa22.35■■□□□ 1.17
CTCFL-219ENST00000608720 UBTFP17480 764 aaKnown RBP22.33■■□□□ 1.17
CTCFL-219ENST00000608720 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
CTCFL-219ENST00000608720 GOLGA3Q08378 1498 aa22.31■■□□□ 1.16
CTCFL-219ENST00000608720 TTBK1Q5TCY1 1321 aaPredicted RBP22.22■■□□□ 1.15
CTCFL-219ENST00000608720 CEP164Q9UPV0 1460 aa22.18■■□□□ 1.14
CTCFL-219ENST00000608720 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
CTCFL-219ENST00000608720 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.14
CTCFL-219ENST00000608720 KIF21BO75037 1637 aa22.12■■□□□ 1.13
CTCFL-219ENST00000608720 DIEXFQ68CQ4 756 aaKnown RBP22.12■■□□□ 1.13
CTCFL-219ENST00000608720 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
CTCFL-219ENST00000608720 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
CTCFL-219ENST00000608720 CLIP1P30622 1438 aa22.05■■□□□ 1.12
CTCFL-219ENST00000608720 CC2D2AQ9P2K1 1620 aa22■■□□□ 1.11
CTCFL-219ENST00000608720 VPS8Q8N3P4 1428 aa21.99■■□□□ 1.11
CTCFL-219ENST00000608720 ZNF316A6NFI3 1004 aaPredicted RBP21.96■■□□□ 1.11
CTCFL-219ENST00000608720 CENPBP07199 599 aaPredicted RBP21.95■■□□□ 1.1
CTCFL-219ENST00000608720 NEUROD1Q13562 356 aa21.94■■□□□ 1.1
CTCFL-219ENST00000608720 APLP2Q06481 763 aa21.93■■□□□ 1.1
CTCFL-219ENST00000608720 RAPGEF2Q9Y4G8 1499 aa21.93■■□□□ 1.1
CTCFL-219ENST00000608720 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
CTCFL-219ENST00000608720 HNRNPUL2Q1KMD3 747 aaKnown RBP21.88■■□□□ 1.09
CTCFL-219ENST00000608720 GTF3C3Q9Y5Q9 886 aa21.82■■□□□ 1.08
CTCFL-219ENST00000608720 BIVM-ERCC5R4GMW8 1640 aa21.79■■□□□ 1.08
CTCFL-219ENST00000608720 ERICH3Q5RHP9 1530 aa21.77■■□□□ 1.08
CTCFL-219ENST00000608720 PRXQ9BXM0 1461 aa21.77■■□□□ 1.07
CTCFL-219ENST00000608720 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
CTCFL-219ENST00000608720 RANGAP1P46060 587 aaPredicted RBP21.72■■□□□ 1.07
CTCFL-219ENST00000608720 HMGXB3Q12766 1538 aa21.72■■□□□ 1.07
CTCFL-219ENST00000608720 CLSPNQ9HAW4 1339 aa21.66■■□□□ 1.06
CTCFL-219ENST00000608720 KIF27Q86VH2 1401 aa21.64■■□□□ 1.06
CTCFL-219ENST00000608720 ARAP1Q96P48 1450 aa21.64■■□□□ 1.05
CTCFL-219ENST00000608720 CUX1P39880 1505 aa21.63■■□□□ 1.05
CTCFL-219ENST00000608720 MIER1Q8N108 512 aa21.59■■□□□ 1.05
CTCFL-219ENST00000608720 CFTRP13569 1480 aa21.59■■□□□ 1.05
CTCFL-219ENST00000608720 KANK4Q5T7N3 995 aaPredicted RBP21.55■■□□□ 1.04
CTCFL-219ENST00000608720 DHX57Q6P158 1386 aaKnown RBP21.53■■□□□ 1.04
CTCFL-219ENST00000608720 RRBP1Q9P2E9 1410 aaKnown RBP21.51■■□□□ 1.03
CTCFL-219ENST00000608720 YTHDC1Q96MU7 727 aaKnown RBP21.5■■□□□ 1.03
CTCFL-219ENST00000608720 ARHGAP35Q9NRY4 1499 aa21.44■■□□□ 1.02
CTCFL-219ENST00000608720 CUX2O14529 1486 aa21.42■■□□□ 1.02
CTCFL-219ENST00000608720 CCNB3Q8WWL7 1395 aa21.41■■□□□ 1.02
CTCFL-219ENST00000608720 IGF1RP08069 1367 aa21.39■■□□□ 1.01
CTCFL-219ENST00000608720 CADPSQ9ULU8 1353 aa21.33■■□□□ 1
CTCFL-219ENST00000608720 MAP3K1Q13233 1512 aa21.32■■□□□ 1
CTCFL-219ENST00000608720 NESP48681 1621 aa21.3■■□□□ 1
CTCFL-219ENST00000608720 CARMIL1Q5VZK9 1371 aa21.3■■□□□ 1
CTCFL-219ENST00000608720 PRDM2Q13029 1718 aa21.3■■□□□ 1
CTCFL-219ENST00000608720 TIAM1Q13009 1591 aa21.23■□□□□ 0.99
CTCFL-219ENST00000608720 FGD5Q6ZNL6 1462 aa21.23■□□□□ 0.99
CTCFL-219ENST00000608720 ITGAEP38570 1179 aa21.22■□□□□ 0.99
CTCFL-219ENST00000608720 RAB3GAP2Q9H2M9 1393 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms