RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 FER1L4A9Z1Z3 1794 aa13.27□□□□□ -0.29
ITGB5-212ENST00000608657 ZEB1P37275 1124 aaPredicted RBP13.26□□□□□ -0.29
ITGB5-212ENST00000608657 PRDM15P57071 1507 aaPredicted RBP13.26□□□□□ -0.29
ITGB5-212ENST00000608657 MLECQ14165 292 aa13.26□□□□□ -0.29
ITGB5-212ENST00000608657 SETD5Q9C0A6 1442 aa13.26□□□□□ -0.29
ITGB5-212ENST00000608657 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
ITGB5-212ENST00000608657 ZC3H13Q5T200 1668 aaKnown RBP13.24□□□□□ -0.29
ITGB5-212ENST00000608657 GGT6Q6P531 493 aa13.24□□□□□ -0.29
ITGB5-212ENST00000608657 CEP152O94986 1710 aa13.24□□□□□ -0.29
ITGB5-212ENST00000608657 ADAMTSL3P82987 1691 aa13.24□□□□□ -0.29
ITGB5-212ENST00000608657 MADDQ8WXG6 1647 aa13.24□□□□□ -0.29
ITGB5-212ENST00000608657 FAM135AQ9P2D6 1515 aa13.23□□□□□ -0.29
ITGB5-212ENST00000608657 CLTCQ00610 1675 aaKnown RBP13.23□□□□□ -0.29
ITGB5-212ENST00000608657 KDM5DQ9BY66 1539 aa13.23□□□□□ -0.29
ITGB5-212ENST00000608657 KANK1Q14678 1352 aa13.22□□□□□ -0.29
ITGB5-212ENST00000608657 RIMS1Q86UR5 1692 aaKnown RBP13.22□□□□□ -0.29
ITGB5-212ENST00000608657 RAB3GAP2Q9H2M9 1393 aa13.21□□□□□ -0.29
ITGB5-212ENST00000608657 IQGAP3Q86VI3 1631 aa13.21□□□□□ -0.29
ITGB5-212ENST00000608657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.29
ITGB5-212ENST00000608657 ESF1Q9H501 851 aaKnown RBP13.21□□□□□ -0.29
ITGB5-212ENST00000608657 MROH2AA6NES4 1674 aa13.2□□□□□ -0.3
ITGB5-212ENST00000608657 CAMSAP1Q5T5Y3 1602 aa13.2□□□□□ -0.3
ITGB5-212ENST00000608657 VWDEQ8N2E2 1590 aa13.2□□□□□ -0.3
ITGB5-212ENST00000608657 ABCC3O15438 1527 aa13.19□□□□□ -0.3
ITGB5-212ENST00000608657 PPP6R1Q9UPN7 881 aa13.19□□□□□ -0.3
ITGB5-212ENST00000608657 CNTLNQ9NXG0 1405 aa13.19□□□□□ -0.3
ITGB5-212ENST00000608657 TET3O43151 1660 aa13.18□□□□□ -0.3
ITGB5-212ENST00000608657 ACIN1Q9UKV3 1341 aaKnown RBP13.18□□□□□ -0.3
ITGB5-212ENST00000608657 TRIM52Q96A61 297 aa13.18□□□□□ -0.3
ITGB5-212ENST00000608657 NUP155O75694 1391 aa13.18□□□□□ -0.3
ITGB5-212ENST00000608657 WASHC2CQ9Y4E1 1318 aa13.17□□□□□ -0.3
ITGB5-212ENST00000608657 LMTK2Q8IWU2 1503 aa13.17□□□□□ -0.3
ITGB5-212ENST00000608657 C3P01024 1663 aa13.15□□□□□ -0.3
ITGB5-212ENST00000608657 EFCAB6Q5THR3 1501 aa13.15□□□□□ -0.3
ITGB5-212ENST00000608657 E9PCH4 1651 aa13.13□□□□□ -0.31
ITGB5-212ENST00000608657 PZPP20742 1482 aa13.13□□□□□ -0.31
ITGB5-212ENST00000608657 PTPRMP28827 1452 aa13.12□□□□□ -0.31
ITGB5-212ENST00000608657 CFAP65Q6ZU64 1925 aaKnown RBP13.11□□□□□ -0.31
ITGB5-212ENST00000608657 ZMYM3Q14202 1370 aa13.11□□□□□ -0.31
ITGB5-212ENST00000608657 KDM4FA0A1W2PPD8 638 aa13.11□□□□□ -0.31
ITGB5-212ENST00000608657 PREX1Q8TCU6 1659 aa13.11□□□□□ -0.31
ITGB5-212ENST00000608657 PLPPR3Q6T4P5 718 aa13.1□□□□□ -0.31
ITGB5-212ENST00000608657 SLC4A1APQ9BWU0 796 aaKnown RBP13.1□□□□□ -0.31
ITGB5-212ENST00000608657 ARHGAP31Q2M1Z3 1444 aa13.1□□□□□ -0.31
ITGB5-212ENST00000608657 RPRD2Q5VT52 1461 aaKnown RBP13.1□□□□□ -0.31
ITGB5-212ENST00000608657 NPATQ14207 1427 aa13.09□□□□□ -0.31
ITGB5-212ENST00000608657 SPHKAPQ2M3C7 1700 aa13.08□□□□□ -0.32
ITGB5-212ENST00000608657 CEBPAP49715 358 aaPredicted RBP13.07□□□□□ -0.32
ITGB5-212ENST00000608657 MPHOSPH9Q99550 1183 aa13.07□□□□□ -0.32
ITGB5-212ENST00000608657 SPATA31D1Q6ZQQ2 1576 aa13.07□□□□□ -0.32
ITGB5-212ENST00000608657 ERVK-7P63135 1459 aa13.06□□□□□ -0.32
ITGB5-212ENST00000608657 PKD2Q13563 968 aa13.06□□□□□ -0.32
ITGB5-212ENST00000608657 MYO3AQ8NEV4 1616 aa13.04□□□□□ -0.32
ITGB5-212ENST00000608657 SYNMO15061 1565 aa13.03□□□□□ -0.32
ITGB5-212ENST00000608657 FBXO31Q5XUX0 539 aaPredicted RBP13.03□□□□□ -0.32
ITGB5-212ENST00000608657 TNRQ92752 1358 aa13.03□□□□□ -0.32
ITGB5-212ENST00000608657 SETD1BQ9UPS6 1966 aaKnown RBP13.03□□□□□ -0.32
ITGB5-212ENST00000608657 NOS1P29475 1434 aa13.03□□□□□ -0.32
ITGB5-212ENST00000608657 TRPM2O94759 1503 aa13.03□□□□□ -0.32
ITGB5-212ENST00000608657 DHX57Q6P158 1386 aaKnown RBP13.02□□□□□ -0.33
ITGB5-212ENST00000608657 FOXD1Q16676 465 aa13.01□□□□□ -0.33
ITGB5-212ENST00000608657 ZNF142P52746 1687 aaPredicted RBP13□□□□□ -0.33
ITGB5-212ENST00000608657 PIK3C2BO00750 1634 aa13□□□□□ -0.33
ITGB5-212ENST00000608657 PTPRTO14522 1441 aa13□□□□□ -0.33
ITGB5-212ENST00000608657 CLTCL1P53675 1640 aa12.99□□□□□ -0.33
ITGB5-212ENST00000608657 UGGT1Q9NYU2 1555 aa12.99□□□□□ -0.33
ITGB5-212ENST00000608657 NLRP1Q9C000 1473 aa12.99□□□□□ -0.33
ITGB5-212ENST00000608657 KIF1BO60333 1816 aa12.99□□□□□ -0.33
ITGB5-212ENST00000608657 CEP170BQ9Y4F5 1589 aaPredicted RBP12.98□□□□□ -0.33
ITGB5-212ENST00000608657 UHRF1BP1Q6BDS2 1440 aa12.98□□□□□ -0.33
ITGB5-212ENST00000608657 PLA2R1Q13018 1463 aa12.97□□□□□ -0.33
ITGB5-212ENST00000608657 CCDC144AA2RUR9 1427 aa12.97□□□□□ -0.33
ITGB5-212ENST00000608657 A2ML1A8K2U0 1454 aa12.97□□□□□ -0.33
ITGB5-212ENST00000608657 SLC52A1Q9NWF4 448 aa12.96□□□□□ -0.33
ITGB5-212ENST00000608657 ADGRB3O60242 1522 aa12.96□□□□□ -0.33
ITGB5-212ENST00000608657 UBR1Q8IWV7 1749 aa12.96□□□□□ -0.34
ITGB5-212ENST00000608657 KDM5AP29375 1690 aaKnown RBP12.96□□□□□ -0.34
ITGB5-212ENST00000608657 ANKRD30BQ9BXX2 1392 aa12.95□□□□□ -0.34
ITGB5-212ENST00000608657 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
ITGB5-212ENST00000608657 AEBP2Q6ZN18 517 aaPredicted RBP12.94□□□□□ -0.34
ITGB5-212ENST00000608657 TMEM131LA2VDJ0 1609 aa12.93□□□□□ -0.34
ITGB5-212ENST00000608657 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
ITGB5-212ENST00000608657 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
ITGB5-212ENST00000608657 IDI1Q13907 227 aa12.92□□□□□ -0.34
ITGB5-212ENST00000608657 CCER1Q8TC90 406 aaPredicted RBP12.92□□□□□ -0.34
ITGB5-212ENST00000608657 LMTK3Q96Q04 1460 aa12.91□□□□□ -0.34
ITGB5-212ENST00000608657 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.35
ITGB5-212ENST00000608657 POLR1AO95602 1720 aaPredicted RBP12.88□□□□□ -0.35
ITGB5-212ENST00000608657 CLSPNQ9HAW4 1339 aa12.88□□□□□ -0.35
ITGB5-212ENST00000608657 ZNF326Q5BKZ1 582 aaKnown RBP12.87□□□□□ -0.35
ITGB5-212ENST00000608657 THEMISQ8N1K5 641 aaPredicted RBP12.87□□□□□ -0.35
ITGB5-212ENST00000608657 IFT172Q9UG01 1749 aa12.87□□□□□ -0.35
ITGB5-212ENST00000608657 SPATA31E1Q6ZUB1 1445 aa12.87□□□□□ -0.35
ITGB5-212ENST00000608657 PPLO60437 1756 aa12.86□□□□□ -0.35
ITGB5-212ENST00000608657 SIN3AQ96ST3 1273 aa12.86□□□□□ -0.35
ITGB5-212ENST00000608657 SLIT1O75093 1534 aa12.86□□□□□ -0.35
ITGB5-212ENST00000608657 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
ITGB5-212ENST00000608657 ARHGAP23Q9P227 1491 aa12.85□□□□□ -0.35
ITGB5-212ENST00000608657 TMEM2Q9UHN6 1383 aa12.84□□□□□ -0.35
ITGB5-212ENST00000608657 NEXMIFQ5QGS0 1516 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms