RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 CLSPNQ9HAW4 1339 aa24.46■■□□□ 1.51
PMF1-206ENST00000606952 MROH1Q8NDA8 1641 aa24.46■■□□□ 1.51
PMF1-206ENST00000606952 PRDM15P57071 1507 aaPredicted RBP24.45■■□□□ 1.51
PMF1-206ENST00000606952 PZPP20742 1482 aa24.45■■□□□ 1.51
PMF1-206ENST00000606952 VWDEQ8N2E2 1590 aa24.45■■□□□ 1.5
PMF1-206ENST00000606952 ATP10AO60312 1499 aa24.45■■□□□ 1.5
PMF1-206ENST00000606952 AGLP35573 1532 aa24.44■■□□□ 1.5
PMF1-206ENST00000606952 MYT1LQ9UL68 1186 aa24.39■■□□□ 1.49
PMF1-206ENST00000606952 FAM135AQ9P2D6 1515 aa24.39■■□□□ 1.49
PMF1-206ENST00000606952 CCER1Q8TC90 406 aaPredicted RBP24.37■■□□□ 1.49
PMF1-206ENST00000606952 NUP155O75694 1391 aa24.35■■□□□ 1.49
PMF1-206ENST00000606952 SIGLEC1Q9BZZ2 1709 aa24.35■■□□□ 1.49
PMF1-206ENST00000606952 LMTK2Q8IWU2 1503 aa24.35■■□□□ 1.49
PMF1-206ENST00000606952 TRIM52Q96A61 297 aa24.34■■□□□ 1.49
PMF1-206ENST00000606952 TET3O43151 1660 aa24.33■■□□□ 1.49
PMF1-206ENST00000606952 MPHOSPH9Q99550 1183 aa24.32■■□□□ 1.48
PMF1-206ENST00000606952 ZC3H13Q5T200 1668 aaKnown RBP24.31■■□□□ 1.48
PMF1-206ENST00000606952 KIF3BO15066 747 aa24.29■■□□□ 1.48
PMF1-206ENST00000606952 KANK1Q14678 1352 aa24.27■■□□□ 1.48
PMF1-206ENST00000606952 SLC4A1APQ9BWU0 796 aaKnown RBP24.26■■□□□ 1.47
PMF1-206ENST00000606952 CEP152O94986 1710 aa24.25■■□□□ 1.47
PMF1-206ENST00000606952 ABCC3O15438 1527 aa24.24■■□□□ 1.47
PMF1-206ENST00000606952 EFCAB6Q5THR3 1501 aa24.24■■□□□ 1.47
PMF1-206ENST00000606952 E9PCH4 1651 aa24.24■■□□□ 1.47
PMF1-206ENST00000606952 ANKRD30BQ9BXX2 1392 aa24.22■■□□□ 1.47
PMF1-206ENST00000606952 ZEB1P37275 1124 aaPredicted RBP24.21■■□□□ 1.47
PMF1-206ENST00000606952 CAMSAP1Q5T5Y3 1602 aa24.2■■□□□ 1.46
PMF1-206ENST00000606952 PPP6R1Q9UPN7 881 aa24.19■■□□□ 1.46
PMF1-206ENST00000606952 PKD2Q13563 968 aa24.18■■□□□ 1.46
PMF1-206ENST00000606952 RPRD2Q5VT52 1461 aaKnown RBP24.18■■□□□ 1.46
PMF1-206ENST00000606952 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.17■■□□□ 1.46
PMF1-206ENST00000606952 ARHGAP31Q2M1Z3 1444 aa24.16■■□□□ 1.46
PMF1-206ENST00000606952 SPHKAPQ2M3C7 1700 aa24.15■■□□□ 1.46
PMF1-206ENST00000606952 PTPRTO14522 1441 aa24.13■■□□□ 1.45
PMF1-206ENST00000606952 PLA2R1Q13018 1463 aa24.13■■□□□ 1.45
PMF1-206ENST00000606952 TRPM2O94759 1503 aa24.12■■□□□ 1.45
PMF1-206ENST00000606952 GGT6Q6P531 493 aa24.12■■□□□ 1.45
PMF1-206ENST00000606952 MROH2AA6NES4 1674 aa24.1■■□□□ 1.45
PMF1-206ENST00000606952 NPATQ14207 1427 aa24.1■■□□□ 1.45
PMF1-206ENST00000606952 CLTCQ00610 1675 aaKnown RBP24.08■■□□□ 1.45
PMF1-206ENST00000606952 FOXD1Q16676 465 aa24.08■■□□□ 1.45
PMF1-206ENST00000606952 TIMELESSQ9UNS1 1208 aa24.07■■□□□ 1.44
PMF1-206ENST00000606952 WASHC2CQ9Y4E1 1318 aa24.06■■□□□ 1.44
PMF1-206ENST00000606952 CNTLNQ9NXG0 1405 aa24.04■■□□□ 1.44
PMF1-206ENST00000606952 NEURL4Q96JN8 1562 aa24.03■■□□□ 1.44
PMF1-206ENST00000606952 NOS1P29475 1434 aa24.03■■□□□ 1.44
PMF1-206ENST00000606952 SIN3AQ96ST3 1273 aa24.03■■□□□ 1.44
PMF1-206ENST00000606952 PREX1Q8TCU6 1659 aa24.02■■□□□ 1.44
PMF1-206ENST00000606952 FER1L4A9Z1Z3 1794 aa24.01■■□□□ 1.43
PMF1-206ENST00000606952 CCDC144AA2RUR9 1427 aa24.01■■□□□ 1.43
PMF1-206ENST00000606952 PIK3C2BO00750 1634 aa24■■□□□ 1.43
PMF1-206ENST00000606952 CLTCL1P53675 1640 aa23.99■■□□□ 1.43
PMF1-206ENST00000606952 SPATA31D1Q6ZQQ2 1576 aa23.99■■□□□ 1.43
PMF1-206ENST00000606952 ADAMTSL3P82987 1691 aa23.99■■□□□ 1.43
PMF1-206ENST00000606952 SYNMO15061 1565 aa23.98■■□□□ 1.43
PMF1-206ENST00000606952 ARID4BQ4LE39 1312 aaPredicted RBP23.96■■□□□ 1.43
PMF1-206ENST00000606952 ERVK-7P63135 1459 aa23.95■■□□□ 1.42
PMF1-206ENST00000606952 CFAP65Q6ZU64 1925 aaKnown RBP23.92■■□□□ 1.42
PMF1-206ENST00000606952 TONSLQ96HA7 1378 aa23.92■■□□□ 1.42
PMF1-206ENST00000606952 NEUROD1Q13562 356 aa23.92■■□□□ 1.42
PMF1-206ENST00000606952 KIF1BO60333 1816 aa23.91■■□□□ 1.42
PMF1-206ENST00000606952 MLECQ14165 292 aa23.91■■□□□ 1.42
PMF1-206ENST00000606952 SPATA31E1Q6ZUB1 1445 aa23.91■■□□□ 1.42
PMF1-206ENST00000606952 ZMYM3Q14202 1370 aa23.91■■□□□ 1.42
PMF1-206ENST00000606952 C3P01024 1663 aa23.9■■□□□ 1.42
PMF1-206ENST00000606952 MADDQ8WXG6 1647 aa23.9■■□□□ 1.42
PMF1-206ENST00000606952 UGGT1Q9NYU2 1555 aa23.89■■□□□ 1.41
PMF1-206ENST00000606952 ADGRB3O60242 1522 aa23.89■■□□□ 1.41
PMF1-206ENST00000606952 ESF1Q9H501 851 aaKnown RBP23.85■■□□□ 1.41
PMF1-206ENST00000606952 RIMS1Q86UR5 1692 aaKnown RBP23.84■■□□□ 1.41
PMF1-206ENST00000606952 IFT172Q9UG01 1749 aa23.84■■□□□ 1.41
PMF1-206ENST00000606952 KDM5AP29375 1690 aaKnown RBP23.83■■□□□ 1.4
PMF1-206ENST00000606952 PPP1R15AO75807 674 aaPredicted RBP23.82■■□□□ 1.4
PMF1-206ENST00000606952 L3MBTL2Q969R5 705 aa23.81■■□□□ 1.4
PMF1-206ENST00000606952 SLC52A1Q9NWF4 448 aa23.81■■□□□ 1.4
PMF1-206ENST00000606952 UHRF1BP1Q6BDS2 1440 aa23.8■■□□□ 1.4
PMF1-206ENST00000606952 TMEM131LA2VDJ0 1609 aa23.8■■□□□ 1.4
PMF1-206ENST00000606952 FBXO31Q5XUX0 539 aaPredicted RBP23.77■■□□□ 1.4
PMF1-206ENST00000606952 PPLO60437 1756 aa23.75■■□□□ 1.39
PMF1-206ENST00000606952 STAC3Q96MF2 364 aa23.75■■□□□ 1.39
PMF1-206ENST00000606952 TNRQ92752 1358 aa23.75■■□□□ 1.39
PMF1-206ENST00000606952 MYOM2P54296 1465 aa23.75■■□□□ 1.39
PMF1-206ENST00000606952 MYO5BQ9ULV0 1848 aa23.74■■□□□ 1.39
PMF1-206ENST00000606952 NLRP1Q9C000 1473 aa23.74■■□□□ 1.39
PMF1-206ENST00000606952 IDI1Q13907 227 aa23.72■■□□□ 1.39
PMF1-206ENST00000606952 MYO3AQ8NEV4 1616 aa23.7■■□□□ 1.39
PMF1-206ENST00000606952 NEXMIFQ5QGS0 1516 aa23.7■■□□□ 1.38
PMF1-206ENST00000606952 NRXN1Q9ULB1 1477 aa23.69■■□□□ 1.38
PMF1-206ENST00000606952 PRAG1Q86YV5 1406 aa23.69■■□□□ 1.38
PMF1-206ENST00000606952 UBR1Q8IWV7 1749 aa23.69■■□□□ 1.38
PMF1-206ENST00000606952 RPGRIP1LQ68CZ1 1315 aa23.68■■□□□ 1.38
PMF1-206ENST00000606952 A2ML1A8K2U0 1454 aa23.68■■□□□ 1.38
PMF1-206ENST00000606952 ZNF142P52746 1687 aaPredicted RBP23.67■■□□□ 1.38
PMF1-206ENST00000606952 TRPM1Q7Z4N2 1603 aa23.67■■□□□ 1.38
PMF1-206ENST00000606952 KIAA1210Q9ULL0 1709 aa23.66■■□□□ 1.38
PMF1-206ENST00000606952 PTPRMP28827 1452 aa23.66■■□□□ 1.38
PMF1-206ENST00000606952 RALGAPBQ86X10 1494 aa23.66■■□□□ 1.38
PMF1-206ENST00000606952 ZFYVE9O95405 1425 aa23.66■■□□□ 1.38
PMF1-206ENST00000606952 SETD1BQ9UPS6 1966 aaKnown RBP23.65■■□□□ 1.38
PMF1-206ENST00000606952 DCAF11Q8TEB1 546 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms