RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 NPATQ14207 1427 aa25.31■■□□□ 1.64
LINC00240-203ENST00000606878 UHRF1BP1Q6BDS2 1440 aa25.31■■□□□ 1.64
LINC00240-203ENST00000606878 C3P01024 1663 aa25.3■■□□□ 1.64
LINC00240-203ENST00000606878 ITGAEP38570 1179 aa25.28■■□□□ 1.64
LINC00240-203ENST00000606878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.28■■□□□ 1.64
LINC00240-203ENST00000606878 CLTCQ00610 1675 aaKnown RBP25.28■■□□□ 1.64
LINC00240-203ENST00000606878 MROH2AA6NES4 1674 aa25.27■■□□□ 1.64
LINC00240-203ENST00000606878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.27■■□□□ 1.64
LINC00240-203ENST00000606878 PTPRKQ15262 1439 aa25.27■■□□□ 1.64
LINC00240-203ENST00000606878 ERBINQ96RT1 1412 aa25.27■■□□□ 1.64
LINC00240-203ENST00000606878 FBXO31Q5XUX0 539 aaPredicted RBP25.26■■□□□ 1.63
LINC00240-203ENST00000606878 CROCC2H7BZ55 1655 aa25.25■■□□□ 1.63
LINC00240-203ENST00000606878 FAM135AQ9P2D6 1515 aa25.24■■□□□ 1.63
LINC00240-203ENST00000606878 KDM5DQ9BY66 1539 aa25.23■■□□□ 1.63
LINC00240-203ENST00000606878 ADGRL2O95490 1459 aa25.22■■□□□ 1.63
LINC00240-203ENST00000606878 PREX1Q8TCU6 1659 aa25.22■■□□□ 1.63
LINC00240-203ENST00000606878 EIF2AK4Q9P2K8 1649 aaKnown RBP25.21■■□□□ 1.63
LINC00240-203ENST00000606878 KANK1Q14678 1352 aa25.2■■□□□ 1.63
LINC00240-203ENST00000606878 DMRT2Q9Y5R5 561 aa25.19■■□□□ 1.62
LINC00240-203ENST00000606878 RNF17Q9BXT8 1623 aaKnown RBP25.18■■□□□ 1.62
LINC00240-203ENST00000606878 ANKRD50Q9ULJ7 1429 aa25.18■■□□□ 1.62
LINC00240-203ENST00000606878 ROCK1Q13464 1354 aa25.18■■□□□ 1.62
LINC00240-203ENST00000606878 PZPP20742 1482 aa25.17■■□□□ 1.62
LINC00240-203ENST00000606878 TNRQ92752 1358 aa25.17■■□□□ 1.62
LINC00240-203ENST00000606878 RRBP1Q9P2E9 1410 aaKnown RBP25.15■■□□□ 1.62
LINC00240-203ENST00000606878 ABCC3O15438 1527 aa25.15■■□□□ 1.62
LINC00240-203ENST00000606878 MROH1Q8NDA8 1641 aa25.1■■□□□ 1.61
LINC00240-203ENST00000606878 THEMISQ8N1K5 641 aaPredicted RBP25.07■■□□□ 1.6
LINC00240-203ENST00000606878 PRDM15P57071 1507 aaPredicted RBP25.07■■□□□ 1.6
LINC00240-203ENST00000606878 ARHGAP31Q2M1Z3 1444 aa25.06■■□□□ 1.6
LINC00240-203ENST00000606878 ZC3H13Q5T200 1668 aaKnown RBP25.06■■□□□ 1.6
LINC00240-203ENST00000606878 A2ML1A8K2U0 1454 aa25.05■■□□□ 1.6
LINC00240-203ENST00000606878 PKD2Q13563 968 aa25.04■■□□□ 1.6
LINC00240-203ENST00000606878 NCKAP5LQ9HCH0 1330 aa25.04■■□□□ 1.6
LINC00240-203ENST00000606878 NLRP1Q9C000 1473 aa25.02■■□□□ 1.6
LINC00240-203ENST00000606878 CEP170BQ9Y4F5 1589 aaPredicted RBP25.01■■□□□ 1.59
LINC00240-203ENST00000606878 DEPDC5O75140 1603 aa25.01■■□□□ 1.59
LINC00240-203ENST00000606878 ERVK-7P63135 1459 aa25.01■■□□□ 1.59
LINC00240-203ENST00000606878 MYO3AQ8NEV4 1616 aa25.01■■□□□ 1.59
LINC00240-203ENST00000606878 CAMSAP1Q5T5Y3 1602 aa25■■□□□ 1.59
LINC00240-203ENST00000606878 LMTK2Q8IWU2 1503 aa24.99■■□□□ 1.59
LINC00240-203ENST00000606878 CEP152O94986 1710 aa24.98■■□□□ 1.59
LINC00240-203ENST00000606878 PTPRTO14522 1441 aa24.98■■□□□ 1.59
LINC00240-203ENST00000606878 ANKLE2Q86XL3 938 aa24.98■■□□□ 1.59
LINC00240-203ENST00000606878 VWDEQ8N2E2 1590 aa24.97■■□□□ 1.59
LINC00240-203ENST00000606878 NUP155O75694 1391 aa24.97■■□□□ 1.59
LINC00240-203ENST00000606878 SPATA31D1Q6ZQQ2 1576 aa24.97■■□□□ 1.59
LINC00240-203ENST00000606878 PLA2R1Q13018 1463 aa24.96■■□□□ 1.59
LINC00240-203ENST00000606878 STRCQ7RTU9 1775 aa24.96■■□□□ 1.59
LINC00240-203ENST00000606878 CFAP65Q6ZU64 1925 aaKnown RBP24.96■■□□□ 1.59
LINC00240-203ENST00000606878 STAG3Q9UJ98 1225 aa24.94■■□□□ 1.58
LINC00240-203ENST00000606878 ZNF142P52746 1687 aaPredicted RBP24.94■■□□□ 1.58
LINC00240-203ENST00000606878 IDI1Q13907 227 aa24.92■■□□□ 1.58
LINC00240-203ENST00000606878 SLC52A1Q9NWF4 448 aa24.92■■□□□ 1.58
LINC00240-203ENST00000606878 UGGT1Q9NYU2 1555 aa24.92■■□□□ 1.58
LINC00240-203ENST00000606878 NAIPQ13075 1403 aa24.89■■□□□ 1.58
LINC00240-203ENST00000606878 CERKQ8TCT0 537 aa24.88■■□□□ 1.57
LINC00240-203ENST00000606878 RPRD2Q5VT52 1461 aaKnown RBP24.87■■□□□ 1.57
LINC00240-203ENST00000606878 NOS1P29475 1434 aa24.86■■□□□ 1.57
LINC00240-203ENST00000606878 EFCAB6Q5THR3 1501 aa24.86■■□□□ 1.57
LINC00240-203ENST00000606878 TRIM52Q96A61 297 aa24.86■■□□□ 1.57
LINC00240-203ENST00000606878 UNC13BO14795 1591 aa24.85■■□□□ 1.57
LINC00240-203ENST00000606878 HFM1A2PYH4 1435 aa24.85■■□□□ 1.57
LINC00240-203ENST00000606878 TXNDC2Q86VQ3 553 aa24.84■■□□□ 1.57
LINC00240-203ENST00000606878 EID1Q9Y6B2 187 aa24.84■■□□□ 1.57
LINC00240-203ENST00000606878 ILDR1Q86SU0 546 aaPredicted RBP24.83■■□□□ 1.57
LINC00240-203ENST00000606878 FBXO41Q8TF61 875 aa24.8■■□□□ 1.56
LINC00240-203ENST00000606878 TET3O43151 1660 aa24.8■■□□□ 1.56
LINC00240-203ENST00000606878 LTKP29376 864 aa24.78■■□□□ 1.56
LINC00240-203ENST00000606878 IQGAP3Q86VI3 1631 aa24.77■■□□□ 1.56
LINC00240-203ENST00000606878 TMEM2Q9UHN6 1383 aa24.77■■□□□ 1.56
LINC00240-203ENST00000606878 CHGAP10645 457 aaKnown RBP24.76■■□□□ 1.55
LINC00240-203ENST00000606878 HDGFP51858 240 aaKnown RBP24.76■■□□□ 1.55
LINC00240-203ENST00000606878 ZNF335Q9H4Z2 1342 aaPredicted RBP24.76■■□□□ 1.55
LINC00240-203ENST00000606878 NPHP4O75161 1426 aaPredicted RBP24.76■■□□□ 1.55
LINC00240-203ENST00000606878 SYNMO15061 1565 aa24.75■■□□□ 1.55
LINC00240-203ENST00000606878 SLC4A1APQ9BWU0 796 aaKnown RBP24.74■■□□□ 1.55
LINC00240-203ENST00000606878 MED14O60244 1454 aa24.74■■□□□ 1.55
LINC00240-203ENST00000606878 GCC2Q8IWJ2 1684 aa24.73■■□□□ 1.55
LINC00240-203ENST00000606878 UBR1Q8IWV7 1749 aa24.72■■□□□ 1.55
LINC00240-203ENST00000606878 ACIN1Q9UKV3 1341 aaKnown RBP24.72■■□□□ 1.55
LINC00240-203ENST00000606878 PIK3C2BO00750 1634 aa24.72■■□□□ 1.55
LINC00240-203ENST00000606878 ARHGAP23Q9P227 1491 aa24.71■■□□□ 1.55
LINC00240-203ENST00000606878 SCAF11Q99590 1463 aaKnown RBP24.7■■□□□ 1.55
LINC00240-203ENST00000606878 SLIT1O75093 1534 aa24.7■■□□□ 1.54
LINC00240-203ENST00000606878 E9PCH4 1651 aa24.69■■□□□ 1.54
LINC00240-203ENST00000606878 NEURL4Q96JN8 1562 aa24.68■■□□□ 1.54
LINC00240-203ENST00000606878 BCANQ96GW7 911 aa24.67■■□□□ 1.54
LINC00240-203ENST00000606878 LTBP4Q8N2S1 1624 aa24.67■■□□□ 1.54
LINC00240-203ENST00000606878 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.66■■□□□ 1.54
LINC00240-203ENST00000606878 SETD5Q9C0A6 1442 aa24.66■■□□□ 1.54
LINC00240-203ENST00000606878 POLR1AO95602 1720 aaPredicted RBP24.66■■□□□ 1.54
LINC00240-203ENST00000606878 PPP1R15AO75807 674 aaPredicted RBP24.64■■□□□ 1.54
LINC00240-203ENST00000606878 KDM5AP29375 1690 aaKnown RBP24.64■■□□□ 1.53
LINC00240-203ENST00000606878 ADGRB3O60242 1522 aa24.63■■□□□ 1.53
LINC00240-203ENST00000606878 MPHOSPH9Q99550 1183 aa24.63■■□□□ 1.53
LINC00240-203ENST00000606878 RIMS2Q9UQ26 1411 aa24.6■■□□□ 1.53
LINC00240-203ENST00000606878 ZNF326Q5BKZ1 582 aaKnown RBP24.59■■□□□ 1.53
LINC00240-203ENST00000606878 SLC26A8Q96RN1 970 aa24.59■■□□□ 1.53
LINC00240-203ENST00000606878 IQGAP1P46940 1657 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms