RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 KIF15Q9NS87 1388 aa22.18■■□□□ 1.14
TUBE1-208ENST00000604743 DUOX2Q9NRD8 1548 aa22.17■■□□□ 1.14
TUBE1-208ENST00000604743 UHRF1BP1Q6BDS2 1440 aa22.16■■□□□ 1.14
TUBE1-208ENST00000604743 WASHC2CQ9Y4E1 1318 aa22.16■■□□□ 1.14
TUBE1-208ENST00000604743 EIF2AK4Q9P2K8 1649 aaKnown RBP22.15■■□□□ 1.14
TUBE1-208ENST00000604743 ANKRD30AQ9BXX3 1397 aa22.13■■□□□ 1.13
TUBE1-208ENST00000604743 KDM5DQ9BY66 1539 aa22.13■■□□□ 1.13
TUBE1-208ENST00000604743 RNF17Q9BXT8 1623 aaKnown RBP22.13■■□□□ 1.13
TUBE1-208ENST00000604743 ITGAEP38570 1179 aa22.1■■□□□ 1.13
TUBE1-208ENST00000604743 NPATQ14207 1427 aa22.1■■□□□ 1.13
TUBE1-208ENST00000604743 PTPRKQ15262 1439 aa22.1■■□□□ 1.13
TUBE1-208ENST00000604743 NCOA1Q15788 1441 aa22.08■■□□□ 1.13
TUBE1-208ENST00000604743 ERBINQ96RT1 1412 aa22.08■■□□□ 1.13
TUBE1-208ENST00000604743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.08■■□□□ 1.13
TUBE1-208ENST00000604743 CEP152O94986 1710 aa22.08■■□□□ 1.12
TUBE1-208ENST00000604743 CFAP65Q6ZU64 1925 aaKnown RBP22.08■■□□□ 1.12
TUBE1-208ENST00000604743 FAM135AQ9P2D6 1515 aa22.07■■□□□ 1.12
TUBE1-208ENST00000604743 FBXO31Q5XUX0 539 aaPredicted RBP22.07■■□□□ 1.12
TUBE1-208ENST00000604743 MROH1Q8NDA8 1641 aa22.06■■□□□ 1.12
TUBE1-208ENST00000604743 ADGRL2O95490 1459 aa22.06■■□□□ 1.12
TUBE1-208ENST00000604743 ABCC3O15438 1527 aa22.05■■□□□ 1.12
TUBE1-208ENST00000604743 ZC3H13Q5T200 1668 aaKnown RBP22.04■■□□□ 1.12
TUBE1-208ENST00000604743 MYO3AQ8NEV4 1616 aa22.04■■□□□ 1.12
TUBE1-208ENST00000604743 PZPP20742 1482 aa22.03■■□□□ 1.12
TUBE1-208ENST00000604743 STRCQ7RTU9 1775 aa22■■□□□ 1.11
TUBE1-208ENST00000604743 CAMSAP1Q5T5Y3 1602 aa22■■□□□ 1.11
TUBE1-208ENST00000604743 TNRQ92752 1358 aa21.99■■□□□ 1.11
TUBE1-208ENST00000604743 DEPDC5O75140 1603 aa21.99■■□□□ 1.11
TUBE1-208ENST00000604743 PRDM15P57071 1507 aaPredicted RBP21.99■■□□□ 1.11
TUBE1-208ENST00000604743 KANK1Q14678 1352 aa21.99■■□□□ 1.11
TUBE1-208ENST00000604743 CEP170BQ9Y4F5 1589 aaPredicted RBP21.98■■□□□ 1.11
TUBE1-208ENST00000604743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.98■■□□□ 1.11
TUBE1-208ENST00000604743 ZNF142P52746 1687 aaPredicted RBP21.98■■□□□ 1.11
TUBE1-208ENST00000604743 ANKRD50Q9ULJ7 1429 aa21.97■■□□□ 1.11
TUBE1-208ENST00000604743 RRBP1Q9P2E9 1410 aaKnown RBP21.95■■□□□ 1.1
TUBE1-208ENST00000604743 A2ML1A8K2U0 1454 aa21.93■■□□□ 1.1
TUBE1-208ENST00000604743 ROCK1Q13464 1354 aa21.93■■□□□ 1.1
TUBE1-208ENST00000604743 DMRT2Q9Y5R5 561 aa21.91■■□□□ 1.1
TUBE1-208ENST00000604743 ERVK-7P63135 1459 aa21.9■■□□□ 1.1
TUBE1-208ENST00000604743 NCKAP5LQ9HCH0 1330 aa21.9■■□□□ 1.1
TUBE1-208ENST00000604743 SPATA31D1Q6ZQQ2 1576 aa21.9■■□□□ 1.1
TUBE1-208ENST00000604743 VWDEQ8N2E2 1590 aa21.88■■□□□ 1.09
TUBE1-208ENST00000604743 NLRP1Q9C000 1473 aa21.87■■□□□ 1.09
TUBE1-208ENST00000604743 ARHGAP31Q2M1Z3 1444 aa21.87■■□□□ 1.09
TUBE1-208ENST00000604743 LMTK2Q8IWU2 1503 aa21.85■■□□□ 1.09
TUBE1-208ENST00000604743 UGGT1Q9NYU2 1555 aa21.85■■□□□ 1.09
TUBE1-208ENST00000604743 PLA2R1Q13018 1463 aa21.83■■□□□ 1.09
TUBE1-208ENST00000604743 UNC13BO14795 1591 aa21.83■■□□□ 1.09
TUBE1-208ENST00000604743 PTPRTO14522 1441 aa21.82■■□□□ 1.08
TUBE1-208ENST00000604743 EFCAB6Q5THR3 1501 aa21.82■■□□□ 1.08
TUBE1-208ENST00000604743 THEMISQ8N1K5 641 aaPredicted RBP21.82■■□□□ 1.08
TUBE1-208ENST00000604743 PKD2Q13563 968 aa21.81■■□□□ 1.08
TUBE1-208ENST00000604743 POLR1AO95602 1720 aaPredicted RBP21.8■■□□□ 1.08
TUBE1-208ENST00000604743 TET3O43151 1660 aa21.79■■□□□ 1.08
TUBE1-208ENST00000604743 NUP155O75694 1391 aa21.78■■□□□ 1.08
TUBE1-208ENST00000604743 GCC2Q8IWJ2 1684 aa21.78■■□□□ 1.08
TUBE1-208ENST00000604743 UBR1Q8IWV7 1749 aa21.77■■□□□ 1.08
TUBE1-208ENST00000604743 ILDR1Q86SU0 546 aaPredicted RBP21.76■■□□□ 1.07
TUBE1-208ENST00000604743 ANKLE2Q86XL3 938 aa21.76■■□□□ 1.07
TUBE1-208ENST00000604743 STAG3Q9UJ98 1225 aa21.76■■□□□ 1.07
TUBE1-208ENST00000604743 PIK3C2BO00750 1634 aa21.76■■□□□ 1.07
TUBE1-208ENST00000604743 IQGAP3Q86VI3 1631 aa21.76■■□□□ 1.07
TUBE1-208ENST00000604743 SYNMO15061 1565 aa21.74■■□□□ 1.07
TUBE1-208ENST00000604743 NAIPQ13075 1403 aa21.74■■□□□ 1.07
TUBE1-208ENST00000604743 E9PCH4 1651 aa21.73■■□□□ 1.07
TUBE1-208ENST00000604743 IDI1Q13907 227 aa21.73■■□□□ 1.07
TUBE1-208ENST00000604743 CERKQ8TCT0 537 aa21.73■■□□□ 1.07
TUBE1-208ENST00000604743 NOS1P29475 1434 aa21.72■■□□□ 1.07
TUBE1-208ENST00000604743 RPRD2Q5VT52 1461 aaKnown RBP21.71■■□□□ 1.07
TUBE1-208ENST00000604743 NEURL4Q96JN8 1562 aa21.71■■□□□ 1.07
TUBE1-208ENST00000604743 TRIM52Q96A61 297 aa21.68■■□□□ 1.06
TUBE1-208ENST00000604743 ZNF335Q9H4Z2 1342 aaPredicted RBP21.68■■□□□ 1.06
TUBE1-208ENST00000604743 HFM1A2PYH4 1435 aa21.68■■□□□ 1.06
TUBE1-208ENST00000604743 NPHP4O75161 1426 aaPredicted RBP21.67■■□□□ 1.06
TUBE1-208ENST00000604743 SLC52A1Q9NWF4 448 aa21.67■■□□□ 1.06
TUBE1-208ENST00000604743 FBXO41Q8TF61 875 aa21.66■■□□□ 1.06
TUBE1-208ENST00000604743 MYO5BQ9ULV0 1848 aa21.66■■□□□ 1.06
TUBE1-208ENST00000604743 TXNDC2Q86VQ3 553 aa21.65■■□□□ 1.06
TUBE1-208ENST00000604743 IQGAP1P46940 1657 aa21.65■■□□□ 1.06
TUBE1-208ENST00000604743 LTBP4Q8N2S1 1624 aa21.65■■□□□ 1.06
TUBE1-208ENST00000604743 CHGAP10645 457 aaKnown RBP21.64■■□□□ 1.05
TUBE1-208ENST00000604743 LTKP29376 864 aa21.64■■□□□ 1.05
TUBE1-208ENST00000604743 EID1Q9Y6B2 187 aa21.64■■□□□ 1.05
TUBE1-208ENST00000604743 KDM5AP29375 1690 aaKnown RBP21.63■■□□□ 1.05
TUBE1-208ENST00000604743 SLIT1O75093 1534 aa21.63■■□□□ 1.05
TUBE1-208ENST00000604743 MED14O60244 1454 aa21.63■■□□□ 1.05
TUBE1-208ENST00000604743 ADGRB3O60242 1522 aa21.62■■□□□ 1.05
TUBE1-208ENST00000604743 SCAF11Q99590 1463 aaKnown RBP21.62■■□□□ 1.05
TUBE1-208ENST00000604743 ARHGAP23Q9P227 1491 aa21.62■■□□□ 1.05
TUBE1-208ENST00000604743 TMEM2Q9UHN6 1383 aa21.61■■□□□ 1.05
TUBE1-208ENST00000604743 SPHKAPQ2M3C7 1700 aa21.6■■□□□ 1.05
TUBE1-208ENST00000604743 SENP3Q9H4L4 574 aaPredicted RBP21.57■■□□□ 1.04
TUBE1-208ENST00000604743 TMEM131LA2VDJ0 1609 aa21.56■■□□□ 1.04
TUBE1-208ENST00000604743 SLC4A1APQ9BWU0 796 aaKnown RBP21.55■■□□□ 1.04
TUBE1-208ENST00000604743 BCANQ96GW7 911 aa21.54■■□□□ 1.04
TUBE1-208ENST00000604743 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.04
TUBE1-208ENST00000604743 NUTM2DQ5VT03 806 aaPredicted RBP21.51■■□□□ 1.03
TUBE1-208ENST00000604743 RIMS2Q9UQ26 1411 aa21.51■■□□□ 1.03
TUBE1-208ENST00000604743 SETD5Q9C0A6 1442 aa21.5■■□□□ 1.03
TUBE1-208ENST00000604743 STRCP1A6NGW2 1772 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms