RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 EIF2AK4Q9P2K8 1649 aaKnown RBP23.56■■□□□ 1.36
LINC00221-201ENST00000603633 KANK1Q14678 1352 aa23.56■■□□□ 1.36
LINC00221-201ENST00000603633 FAM135AQ9P2D6 1515 aa23.55■■□□□ 1.36
LINC00221-201ENST00000603633 HFM1A2PYH4 1435 aa23.54■■□□□ 1.36
LINC00221-201ENST00000603633 MADDQ8WXG6 1647 aa23.54■■□□□ 1.36
LINC00221-201ENST00000603633 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.54■■□□□ 1.36
LINC00221-201ENST00000603633 ZMYM3Q14202 1370 aa23.53■■□□□ 1.36
LINC00221-201ENST00000603633 NAIPQ13075 1403 aa23.52■■□□□ 1.36
LINC00221-201ENST00000603633 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
LINC00221-201ENST00000603633 RNF17Q9BXT8 1623 aaKnown RBP23.48■■□□□ 1.35
LINC00221-201ENST00000603633 KDM5DQ9BY66 1539 aa23.48■■□□□ 1.35
LINC00221-201ENST00000603633 CEBPAP49715 358 aaPredicted RBP23.48■■□□□ 1.35
LINC00221-201ENST00000603633 PLPPR3Q6T4P5 718 aa23.48■■□□□ 1.35
LINC00221-201ENST00000603633 PRDM15P57071 1507 aaPredicted RBP23.45■■□□□ 1.34
LINC00221-201ENST00000603633 FER1L4A9Z1Z3 1794 aa23.43■■□□□ 1.34
LINC00221-201ENST00000603633 NUP155O75694 1391 aa23.43■■□□□ 1.34
LINC00221-201ENST00000603633 RIMS1Q86UR5 1692 aaKnown RBP23.43■■□□□ 1.34
LINC00221-201ENST00000603633 ABCC3O15438 1527 aa23.42■■□□□ 1.34
LINC00221-201ENST00000603633 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
LINC00221-201ENST00000603633 NPATQ14207 1427 aa23.41■■□□□ 1.34
LINC00221-201ENST00000603633 MROH1Q8NDA8 1641 aa23.41■■□□□ 1.34
LINC00221-201ENST00000603633 SETD5Q9C0A6 1442 aa23.4■■□□□ 1.34
LINC00221-201ENST00000603633 DEPDC5O75140 1603 aa23.39■■□□□ 1.33
LINC00221-201ENST00000603633 LMTK2Q8IWU2 1503 aa23.39■■□□□ 1.33
LINC00221-201ENST00000603633 ARHGAP31Q2M1Z3 1444 aa23.39■■□□□ 1.33
LINC00221-201ENST00000603633 PZPP20742 1482 aa23.38■■□□□ 1.33
LINC00221-201ENST00000603633 TRIM52Q96A61 297 aa23.38■■□□□ 1.33
LINC00221-201ENST00000603633 MROH2AA6NES4 1674 aa23.36■■□□□ 1.33
LINC00221-201ENST00000603633 VWDEQ8N2E2 1590 aa23.36■■□□□ 1.33
LINC00221-201ENST00000603633 HRCP23327 699 aa23.35■■□□□ 1.33
LINC00221-201ENST00000603633 FBXO31Q5XUX0 539 aaPredicted RBP23.35■■□□□ 1.33
LINC00221-201ENST00000603633 CLTCQ00610 1675 aaKnown RBP23.34■■□□□ 1.33
LINC00221-201ENST00000603633 ZC3H13Q5T200 1668 aaKnown RBP23.34■■□□□ 1.33
LINC00221-201ENST00000603633 UNC13BO14795 1591 aa23.33■■□□□ 1.33
LINC00221-201ENST00000603633 GCC2Q8IWJ2 1684 aa23.32■■□□□ 1.32
LINC00221-201ENST00000603633 TNRQ92752 1358 aa23.31■■□□□ 1.32
LINC00221-201ENST00000603633 RAB3GAP2Q9H2M9 1393 aa23.3■■□□□ 1.32
LINC00221-201ENST00000603633 UHRF1BP1Q6BDS2 1440 aa23.3■■□□□ 1.32
LINC00221-201ENST00000603633 RPRD2Q5VT52 1461 aaKnown RBP23.29■■□□□ 1.32
LINC00221-201ENST00000603633 C3P01024 1663 aa23.28■■□□□ 1.32
LINC00221-201ENST00000603633 SLC4A1APQ9BWU0 796 aaKnown RBP23.28■■□□□ 1.32
LINC00221-201ENST00000603633 ERVK-7P63135 1459 aa23.25■■□□□ 1.31
LINC00221-201ENST00000603633 EFCAB6Q5THR3 1501 aa23.25■■□□□ 1.31
LINC00221-201ENST00000603633 SLC52A1Q9NWF4 448 aa23.24■■□□□ 1.31
LINC00221-201ENST00000603633 IQGAP3Q86VI3 1631 aa23.24■■□□□ 1.31
LINC00221-201ENST00000603633 CAMSAP1Q5T5Y3 1602 aa23.23■■□□□ 1.31
LINC00221-201ENST00000603633 NLRP1Q9C000 1473 aa23.22■■□□□ 1.31
LINC00221-201ENST00000603633 SPATA31D1Q6ZQQ2 1576 aa23.22■■□□□ 1.31
LINC00221-201ENST00000603633 PKD2Q13563 968 aa23.22■■□□□ 1.31
LINC00221-201ENST00000603633 MPHOSPH9Q99550 1183 aa23.22■■□□□ 1.31
LINC00221-201ENST00000603633 NOS1P29475 1434 aa23.21■■□□□ 1.31
LINC00221-201ENST00000603633 TET3O43151 1660 aa23.2■■□□□ 1.3
LINC00221-201ENST00000603633 CEP152O94986 1710 aa23.2■■□□□ 1.3
LINC00221-201ENST00000603633 LMTK3Q96Q04 1460 aa23.19■■□□□ 1.3
LINC00221-201ENST00000603633 SETD1BQ9UPS6 1966 aaKnown RBP23.17■■□□□ 1.3
LINC00221-201ENST00000603633 THEMISQ8N1K5 641 aaPredicted RBP23.17■■□□□ 1.3
LINC00221-201ENST00000603633 A2ML1A8K2U0 1454 aa23.16■■□□□ 1.3
LINC00221-201ENST00000603633 IDI1Q13907 227 aa23.16■■□□□ 1.3
LINC00221-201ENST00000603633 HSPA2P54652 639 aa23.14■■□□□ 1.29
LINC00221-201ENST00000603633 STAG3Q9UJ98 1225 aa23.14■■□□□ 1.29
LINC00221-201ENST00000603633 PTPRTO14522 1441 aa23.13■■□□□ 1.29
LINC00221-201ENST00000603633 PREX1Q8TCU6 1659 aa23.12■■□□□ 1.29
LINC00221-201ENST00000603633 CEP170BQ9Y4F5 1589 aaPredicted RBP23.1■■□□□ 1.29
LINC00221-201ENST00000603633 MYO3AQ8NEV4 1616 aa23.08■■□□□ 1.28
LINC00221-201ENST00000603633 UGGT1Q9NYU2 1555 aa23.06■■□□□ 1.28
LINC00221-201ENST00000603633 E9PCH4 1651 aa23.06■■□□□ 1.28
LINC00221-201ENST00000603633 FOXD1Q16676 465 aa23.06■■□□□ 1.28
LINC00221-201ENST00000603633 PCGF6Q9BYE7 350 aa23.05■■□□□ 1.28
LINC00221-201ENST00000603633 DMRT2Q9Y5R5 561 aa23.05■■□□□ 1.28
LINC00221-201ENST00000603633 PLA2R1Q13018 1463 aa23.04■■□□□ 1.28
LINC00221-201ENST00000603633 ANKLE2Q86XL3 938 aa23.04■■□□□ 1.28
LINC00221-201ENST00000603633 SYNMO15061 1565 aa23.04■■□□□ 1.28
LINC00221-201ENST00000603633 CHGAP10645 457 aaKnown RBP23.03■■□□□ 1.28
LINC00221-201ENST00000603633 HDGFP51858 240 aaKnown RBP23.03■■□□□ 1.28
LINC00221-201ENST00000603633 EID1Q9Y6B2 187 aa23.01■■□□□ 1.27
LINC00221-201ENST00000603633 ZNF142P52746 1687 aaPredicted RBP23.01■■□□□ 1.27
LINC00221-201ENST00000603633 TRPM2O94759 1503 aa23■■□□□ 1.27
LINC00221-201ENST00000603633 TMEM2Q9UHN6 1383 aa22.99■■□□□ 1.27
LINC00221-201ENST00000603633 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
LINC00221-201ENST00000603633 TXNDC2Q86VQ3 553 aa22.97■■□□□ 1.27
LINC00221-201ENST00000603633 NCKAP5LQ9HCH0 1330 aa22.96■■□□□ 1.27
LINC00221-201ENST00000603633 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.96■■□□□ 1.27
LINC00221-201ENST00000603633 ADGRB3O60242 1522 aa22.96■■□□□ 1.27
LINC00221-201ENST00000603633 ANKRD30BQ9BXX2 1392 aa22.95■■□□□ 1.26
LINC00221-201ENST00000603633 PIK3C2BO00750 1634 aa22.93■■□□□ 1.26
LINC00221-201ENST00000603633 ARHGAP23Q9P227 1491 aa22.93■■□□□ 1.26
LINC00221-201ENST00000603633 ZNF326Q5BKZ1 582 aaKnown RBP22.93■■□□□ 1.26
LINC00221-201ENST00000603633 SLIT1O75093 1534 aa22.92■■□□□ 1.26
LINC00221-201ENST00000603633 CFAP65Q6ZU64 1925 aaKnown RBP22.92■■□□□ 1.26
LINC00221-201ENST00000603633 KDM5AP29375 1690 aaKnown RBP22.91■■□□□ 1.26
LINC00221-201ENST00000603633 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
LINC00221-201ENST00000603633 LTKP29376 864 aa22.9■■□□□ 1.26
LINC00221-201ENST00000603633 RPGRIP1LQ68CZ1 1315 aa22.9■■□□□ 1.26
LINC00221-201ENST00000603633 SCAF11Q99590 1463 aaKnown RBP22.89■■□□□ 1.26
LINC00221-201ENST00000603633 PPP1R15AO75807 674 aaPredicted RBP22.89■■□□□ 1.25
LINC00221-201ENST00000603633 RIMS2Q9UQ26 1411 aa22.88■■□□□ 1.25
LINC00221-201ENST00000603633 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
LINC00221-201ENST00000603633 MED14O60244 1454 aa22.86■■□□□ 1.25
LINC00221-201ENST00000603633 TMEM131LA2VDJ0 1609 aa22.86■■□□□ 1.25
LINC00221-201ENST00000603633 DHX57Q6P158 1386 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms