RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 DUOX2Q9NRD8 1548 aa24.42■■□□□ 1.5
PPFIA4-213ENST00000601609 RRP7BPQ9NSQ0 103 aa24.42■■□□□ 1.5
PPFIA4-213ENST00000601609 KDM5DQ9BY66 1539 aa24.4■■□□□ 1.5
PPFIA4-213ENST00000601609 EIF2AK4Q9P2K8 1649 aaKnown RBP24.4■■□□□ 1.5
PPFIA4-213ENST00000601609 ANKRD30AQ9BXX3 1397 aa24.39■■□□□ 1.49
PPFIA4-213ENST00000601609 WASHC2CQ9Y4E1 1318 aa24.38■■□□□ 1.49
PPFIA4-213ENST00000601609 SETD1BQ9UPS6 1966 aaKnown RBP24.38■■□□□ 1.49
PPFIA4-213ENST00000601609 NPATQ14207 1427 aa24.36■■□□□ 1.49
PPFIA4-213ENST00000601609 FAM135AQ9P2D6 1515 aa24.36■■□□□ 1.49
PPFIA4-213ENST00000601609 RNF17Q9BXT8 1623 aaKnown RBP24.36■■□□□ 1.49
PPFIA4-213ENST00000601609 ERBINQ96RT1 1412 aa24.35■■□□□ 1.49
PPFIA4-213ENST00000601609 PTPRKQ15262 1439 aa24.32■■□□□ 1.48
PPFIA4-213ENST00000601609 ZC3H13Q5T200 1668 aaKnown RBP24.3■■□□□ 1.48
PPFIA4-213ENST00000601609 MYO3AQ8NEV4 1616 aa24.29■■□□□ 1.48
PPFIA4-213ENST00000601609 ITGAEP38570 1179 aa24.29■■□□□ 1.48
PPFIA4-213ENST00000601609 NCOA1Q15788 1441 aa24.28■■□□□ 1.48
PPFIA4-213ENST00000601609 ADGRL2O95490 1459 aa24.28■■□□□ 1.48
PPFIA4-213ENST00000601609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.28■■□□□ 1.48
PPFIA4-213ENST00000601609 ABCC3O15438 1527 aa24.28■■□□□ 1.48
PPFIA4-213ENST00000601609 PZPP20742 1482 aa24.27■■□□□ 1.48
PPFIA4-213ENST00000601609 MROH1Q8NDA8 1641 aa24.27■■□□□ 1.48
PPFIA4-213ENST00000601609 CEP152O94986 1710 aa24.27■■□□□ 1.48
PPFIA4-213ENST00000601609 KANK1Q14678 1352 aa24.24■■□□□ 1.47
PPFIA4-213ENST00000601609 PRDM15P57071 1507 aaPredicted RBP24.24■■□□□ 1.47
PPFIA4-213ENST00000601609 FBXO31Q5XUX0 539 aaPredicted RBP24.23■■□□□ 1.47
PPFIA4-213ENST00000601609 TNRQ92752 1358 aa24.23■■□□□ 1.47
PPFIA4-213ENST00000601609 CAMSAP1Q5T5Y3 1602 aa24.22■■□□□ 1.47
PPFIA4-213ENST00000601609 CEP170BQ9Y4F5 1589 aaPredicted RBP24.22■■□□□ 1.47
PPFIA4-213ENST00000601609 ZNF142P52746 1687 aaPredicted RBP24.21■■□□□ 1.47
PPFIA4-213ENST00000601609 DEPDC5O75140 1603 aa24.2■■□□□ 1.46
PPFIA4-213ENST00000601609 ANKRD50Q9ULJ7 1429 aa24.19■■□□□ 1.46
PPFIA4-213ENST00000601609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.18■■□□□ 1.46
PPFIA4-213ENST00000601609 A2ML1A8K2U0 1454 aa24.16■■□□□ 1.46
PPFIA4-213ENST00000601609 RRBP1Q9P2E9 1410 aaKnown RBP24.16■■□□□ 1.46
PPFIA4-213ENST00000601609 STRCQ7RTU9 1775 aa24.16■■□□□ 1.46
PPFIA4-213ENST00000601609 ROCK1Q13464 1354 aa24.15■■□□□ 1.46
PPFIA4-213ENST00000601609 DMRT2Q9Y5R5 561 aa24.14■■□□□ 1.45
PPFIA4-213ENST00000601609 ERVK-7P63135 1459 aa24.13■■□□□ 1.45
PPFIA4-213ENST00000601609 CFAP65Q6ZU64 1925 aaKnown RBP24.12■■□□□ 1.45
PPFIA4-213ENST00000601609 SPATA31D1Q6ZQQ2 1576 aa24.12■■□□□ 1.45
PPFIA4-213ENST00000601609 NLRP1Q9C000 1473 aa24.11■■□□□ 1.45
PPFIA4-213ENST00000601609 VWDEQ8N2E2 1590 aa24.08■■□□□ 1.44
PPFIA4-213ENST00000601609 PLA2R1Q13018 1463 aa24.07■■□□□ 1.44
PPFIA4-213ENST00000601609 LMTK2Q8IWU2 1503 aa24.07■■□□□ 1.44
PPFIA4-213ENST00000601609 ARHGAP31Q2M1Z3 1444 aa24.07■■□□□ 1.44
PPFIA4-213ENST00000601609 NCKAP5LQ9HCH0 1330 aa24.07■■□□□ 1.44
PPFIA4-213ENST00000601609 UGGT1Q9NYU2 1555 aa24.06■■□□□ 1.44
PPFIA4-213ENST00000601609 UNC13BO14795 1591 aa24.04■■□□□ 1.44
PPFIA4-213ENST00000601609 PTPRTO14522 1441 aa24.04■■□□□ 1.44
PPFIA4-213ENST00000601609 EFCAB6Q5THR3 1501 aa24.04■■□□□ 1.44
PPFIA4-213ENST00000601609 PKD2Q13563 968 aa24.03■■□□□ 1.44
PPFIA4-213ENST00000601609 THEMISQ8N1K5 641 aaPredicted RBP24.02■■□□□ 1.44
PPFIA4-213ENST00000601609 TET3O43151 1660 aa23.99■■□□□ 1.43
PPFIA4-213ENST00000601609 POLR1AO95602 1720 aaPredicted RBP23.98■■□□□ 1.43
PPFIA4-213ENST00000601609 STAG3Q9UJ98 1225 aa23.97■■□□□ 1.43
PPFIA4-213ENST00000601609 GCC2Q8IWJ2 1684 aa23.96■■□□□ 1.43
PPFIA4-213ENST00000601609 NUP155O75694 1391 aa23.96■■□□□ 1.43
PPFIA4-213ENST00000601609 ANKLE2Q86XL3 938 aa23.95■■□□□ 1.42
PPFIA4-213ENST00000601609 IQGAP3Q86VI3 1631 aa23.95■■□□□ 1.42
PPFIA4-213ENST00000601609 UBR1Q8IWV7 1749 aa23.94■■□□□ 1.42
PPFIA4-213ENST00000601609 RPRD2Q5VT52 1461 aaKnown RBP23.94■■□□□ 1.42
PPFIA4-213ENST00000601609 PIK3C2BO00750 1634 aa23.93■■□□□ 1.42
PPFIA4-213ENST00000601609 ILDR1Q86SU0 546 aaPredicted RBP23.93■■□□□ 1.42
PPFIA4-213ENST00000601609 SYNMO15061 1565 aa23.92■■□□□ 1.42
PPFIA4-213ENST00000601609 CERKQ8TCT0 537 aa23.91■■□□□ 1.42
PPFIA4-213ENST00000601609 NOS1P29475 1434 aa23.91■■□□□ 1.42
PPFIA4-213ENST00000601609 NAIPQ13075 1403 aa23.91■■□□□ 1.42
PPFIA4-213ENST00000601609 NEURL4Q96JN8 1562 aa23.9■■□□□ 1.42
PPFIA4-213ENST00000601609 E9PCH4 1651 aa23.89■■□□□ 1.41
PPFIA4-213ENST00000601609 HFM1A2PYH4 1435 aa23.87■■□□□ 1.41
PPFIA4-213ENST00000601609 NPHP4O75161 1426 aaPredicted RBP23.87■■□□□ 1.41
PPFIA4-213ENST00000601609 IDI1Q13907 227 aa23.86■■□□□ 1.41
PPFIA4-213ENST00000601609 ZNF335Q9H4Z2 1342 aaPredicted RBP23.85■■□□□ 1.41
PPFIA4-213ENST00000601609 FBXO41Q8TF61 875 aa23.85■■□□□ 1.41
PPFIA4-213ENST00000601609 TRIM52Q96A61 297 aa23.85■■□□□ 1.41
PPFIA4-213ENST00000601609 ADGRB3O60242 1522 aa23.84■■□□□ 1.41
PPFIA4-213ENST00000601609 SLC52A1Q9NWF4 448 aa23.84■■□□□ 1.41
PPFIA4-213ENST00000601609 IQGAP1P46940 1657 aa23.83■■□□□ 1.41
PPFIA4-213ENST00000601609 SCAF11Q99590 1463 aaKnown RBP23.83■■□□□ 1.41
PPFIA4-213ENST00000601609 EID1Q9Y6B2 187 aa23.83■■□□□ 1.41
PPFIA4-213ENST00000601609 CHGAP10645 457 aaKnown RBP23.82■■□□□ 1.4
PPFIA4-213ENST00000601609 TXNDC2Q86VQ3 553 aa23.82■■□□□ 1.4
PPFIA4-213ENST00000601609 KDM5AP29375 1690 aaKnown RBP23.82■■□□□ 1.4
PPFIA4-213ENST00000601609 LTBP4Q8N2S1 1624 aa23.81■■□□□ 1.4
PPFIA4-213ENST00000601609 SLIT1O75093 1534 aa23.81■■□□□ 1.4
PPFIA4-213ENST00000601609 MED14O60244 1454 aa23.81■■□□□ 1.4
PPFIA4-213ENST00000601609 ARHGAP23Q9P227 1491 aa23.8■■□□□ 1.4
PPFIA4-213ENST00000601609 TMEM2Q9UHN6 1383 aa23.79■■□□□ 1.4
PPFIA4-213ENST00000601609 LTKP29376 864 aa23.76■■□□□ 1.39
PPFIA4-213ENST00000601609 SPHKAPQ2M3C7 1700 aa23.75■■□□□ 1.39
PPFIA4-213ENST00000601609 MYO5BQ9ULV0 1848 aa23.74■■□□□ 1.39
PPFIA4-213ENST00000601609 BCANQ96GW7 911 aa23.73■■□□□ 1.39
PPFIA4-213ENST00000601609 PPP1R15AO75807 674 aaPredicted RBP23.72■■□□□ 1.39
PPFIA4-213ENST00000601609 TMEM131LA2VDJ0 1609 aa23.71■■□□□ 1.39
PPFIA4-213ENST00000601609 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
PPFIA4-213ENST00000601609 CPS1P31327 1500 aa23.69■■□□□ 1.38
PPFIA4-213ENST00000601609 IQSEC2Q5JU85 1478 aa23.69■■□□□ 1.38
PPFIA4-213ENST00000601609 SENP3Q9H4L4 574 aaPredicted RBP23.69■■□□□ 1.38
PPFIA4-213ENST00000601609 RIMS2Q9UQ26 1411 aa23.68■■□□□ 1.38
PPFIA4-213ENST00000601609 HDGFP51858 240 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms