RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PZPP20742 1482 aa33.11■■■□□ 2.89
IRF3-228ENST00000601291 YEATS2Q9ULM3 1422 aa33.1■■■□□ 2.89
IRF3-228ENST00000601291 SLC4A1APQ9BWU0 796 aaKnown RBP33.09■■■□□ 2.89
IRF3-228ENST00000601291 DEPDC5O75140 1603 aa33.06■■■□□ 2.88
IRF3-228ENST00000601291 KIF3BO15066 747 aa33.04■■■□□ 2.88
IRF3-228ENST00000601291 FAM135AQ9P2D6 1515 aa33.04■■■□□ 2.88
IRF3-228ENST00000601291 IQGAP3Q86VI3 1631 aa33.03■■■□□ 2.88
IRF3-228ENST00000601291 ATP10AO60312 1499 aa33.02■■■□□ 2.88
IRF3-228ENST00000601291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.02■■■□□ 2.885e-6■■■□□ 18.6
IRF3-228ENST00000601291 BCORL1Q5H9F3 1711 aa33.02■■■□□ 2.88
IRF3-228ENST00000601291 ARHGEF40Q8TER5 1519 aa33.01■■■□□ 2.87
IRF3-228ENST00000601291 REREQ9P2R6 1566 aa32.99■■■□□ 2.87
IRF3-228ENST00000601291 RNF17Q9BXT8 1623 aaKnown RBP32.98■■■□□ 2.87
IRF3-228ENST00000601291 PRDM15P57071 1507 aaPredicted RBP32.98■■■□□ 2.87
IRF3-228ENST00000601291 KANK1Q14678 1352 aa32.98■■■□□ 2.87
IRF3-228ENST00000601291 MROH1Q8NDA8 1641 aa32.93■■■□□ 2.86
IRF3-228ENST00000601291 PKD2Q13563 968 aa32.93■■■□□ 2.86
IRF3-228ENST00000601291 VWDEQ8N2E2 1590 aa32.91■■■□□ 2.86
IRF3-228ENST00000601291 FOXD1Q16676 465 aa32.88■■■□□ 2.85
IRF3-228ENST00000601291 AGLP35573 1532 aa32.88■■■□□ 2.85
IRF3-228ENST00000601291 ANKRD30BQ9BXX2 1392 aa32.86■■■□□ 2.85
IRF3-228ENST00000601291 TET3O43151 1660 aa32.84■■■□□ 2.85
IRF3-228ENST00000601291 GGT6Q6P531 493 aa32.83■■■□□ 2.85
IRF3-228ENST00000601291 SIN3AQ96ST3 1273 aa32.83■■■□□ 2.85
IRF3-228ENST00000601291 NEUROD1Q13562 356 aa32.81■■■□□ 2.84
IRF3-228ENST00000601291 LMTK2Q8IWU2 1503 aa32.81■■■□□ 2.84
IRF3-228ENST00000601291 CEP152O94986 1710 aa32.75■■■□□ 2.83
IRF3-228ENST00000601291 ZC3H13Q5T200 1668 aaKnown RBP32.75■■■□□ 2.83
IRF3-228ENST00000601291 TIMELESSQ9UNS1 1208 aa32.75■■■□□ 2.83
IRF3-228ENST00000601291 E9PCH4 1651 aa32.74■■■□□ 2.83
IRF3-228ENST00000601291 ABCC3O15438 1527 aa32.74■■■□□ 2.83
IRF3-228ENST00000601291 EFCAB6Q5THR3 1501 aa32.74■■■□□ 2.83
IRF3-228ENST00000601291 WASHC2CQ9Y4E1 1318 aa32.73■■■□□ 2.83
IRF3-228ENST00000601291 SIGLEC1Q9BZZ2 1709 aa32.73■■■□□ 2.83
IRF3-228ENST00000601291 RPRD2Q5VT52 1461 aaKnown RBP32.71■■■□□ 2.83
IRF3-228ENST00000601291 TONSLQ96HA7 1378 aa32.7■■■□□ 2.83
IRF3-228ENST00000601291 PPP6R1Q9UPN7 881 aa32.69■■■□□ 2.82
IRF3-228ENST00000601291 CAMSAP1Q5T5Y3 1602 aa32.66■■■□□ 2.82
IRF3-228ENST00000601291 ARID4BQ4LE39 1312 aaPredicted RBP32.65■■■□□ 2.82
IRF3-228ENST00000601291 CCDC144AA2RUR9 1427 aa32.64■■■□□ 2.82
IRF3-228ENST00000601291 PLA2R1Q13018 1463 aa32.62■■■□□ 2.81
IRF3-228ENST00000601291 SPHKAPQ2M3C7 1700 aa32.62■■■□□ 2.81
IRF3-228ENST00000601291 TRPM2O94759 1503 aa32.61■■■□□ 2.81
IRF3-228ENST00000601291 PTPRTO14522 1441 aa32.6■■■□□ 2.81
IRF3-228ENST00000601291 NPATQ14207 1427 aa32.59■■■□□ 2.81
IRF3-228ENST00000601291 MLECQ14165 292 aa32.58■■■□□ 2.81
IRF3-228ENST00000601291 ARHGAP31Q2M1Z3 1444 aa32.58■■■□□ 2.81
IRF3-228ENST00000601291 ESF1Q9H501 851 aaKnown RBP32.53■■■□□ 2.8
IRF3-228ENST00000601291 CLTCQ00610 1675 aaKnown RBP32.52■■■□□ 2.8
IRF3-228ENST00000601291 CNTLNQ9NXG0 1405 aa32.49■■■□□ 2.79
IRF3-228ENST00000601291 CLTCL1P53675 1640 aa32.46■■■□□ 2.79
IRF3-228ENST00000601291 L3MBTL2Q969R5 705 aa32.45■■■□□ 2.79
IRF3-228ENST00000601291 PPP1R15AO75807 674 aaPredicted RBP32.45■■■□□ 2.78
IRF3-228ENST00000601291 NOS1P29475 1434 aa32.44■■■□□ 2.78
IRF3-228ENST00000601291 PREX1Q8TCU6 1659 aa32.41■■■□□ 2.78
IRF3-228ENST00000601291 MROH2AA6NES4 1674 aa32.38■■■□□ 2.77
IRF3-228ENST00000601291 UGGT1Q9NYU2 1555 aa32.37■■■□□ 2.77
IRF3-228ENST00000601291 ERVK-7P63135 1459 aa32.36■■■□□ 2.77
IRF3-228ENST00000601291 SYNMO15061 1565 aa32.36■■■□□ 2.77
IRF3-228ENST00000601291 NEURL4Q96JN8 1562 aa32.35■■■□□ 2.77
IRF3-228ENST00000601291 ZMYM3Q14202 1370 aa32.35■■■□□ 2.77
IRF3-228ENST00000601291 SPATA31E1Q6ZUB1 1445 aa32.35■■■□□ 2.77
IRF3-228ENST00000601291 CFAP65Q6ZU64 1925 aaKnown RBP32.34■■■□□ 2.77
IRF3-228ENST00000601291 FER1L4A9Z1Z3 1794 aa32.34■■■□□ 2.77
IRF3-228ENST00000601291 PIK3C2BO00750 1634 aa32.32■■■□□ 2.77
IRF3-228ENST00000601291 KIF1BO60333 1816 aa32.32■■■□□ 2.76
IRF3-228ENST00000601291 SPATA31D1Q6ZQQ2 1576 aa32.31■■■□□ 2.76
IRF3-228ENST00000601291 RGL3Q3MIN7 710 aa32.3■■■□□ 2.76
IRF3-228ENST00000601291 SLC52A1Q9NWF4 448 aa32.29■■■□□ 2.76
IRF3-228ENST00000601291 FBXO31Q5XUX0 539 aaPredicted RBP32.28■■■□□ 2.76
IRF3-228ENST00000601291 DCAF11Q8TEB1 546 aa32.27■■■□□ 2.76
IRF3-228ENST00000601291 ADGRB3O60242 1522 aa32.26■■■□□ 2.75
IRF3-228ENST00000601291 UHRF1BP1Q6BDS2 1440 aa32.22■■■□□ 2.75
IRF3-228ENST00000601291 CHGAP10645 457 aaKnown RBP32.2■■■□□ 2.75
IRF3-228ENST00000601291 MADDQ8WXG6 1647 aa32.2■■■□□ 2.75
IRF3-228ENST00000601291 KDM2AQ9Y2K7 1162 aa32.19■■■□□ 2.74
IRF3-228ENST00000601291 ADAMTSL3P82987 1691 aa32.19■■■□□ 2.74
IRF3-228ENST00000601291 IDI1Q13907 227 aa32.19■■■□□ 2.74
IRF3-228ENST00000601291 STAC3Q96MF2 364 aa32.19■■■□□ 2.74
IRF3-228ENST00000601291 C3P01024 1663 aa32.18■■■□□ 2.74
IRF3-228ENST00000601291 ZNF326Q5BKZ1 582 aaKnown RBP32.17■■■□□ 2.74
IRF3-228ENST00000601291 NBPF8Q3BBV2 869 aa32.16■■■□□ 2.74
IRF3-228ENST00000601291 TNRQ92752 1358 aa32.16■■■□□ 2.74
IRF3-228ENST00000601291 RIMS1Q86UR5 1692 aaKnown RBP32.15■■■□□ 2.74
IRF3-228ENST00000601291 PRAG1Q86YV5 1406 aa32.13■■■□□ 2.73
IRF3-228ENST00000601291 RPGRIP1LQ68CZ1 1315 aa32.11■■■□□ 2.73
IRF3-228ENST00000601291 TMEM131LA2VDJ0 1609 aa32.11■■■□□ 2.73
IRF3-228ENST00000601291 MYOM2P54296 1465 aa32.1■■■□□ 2.73
IRF3-228ENST00000601291 IFT172Q9UG01 1749 aa32.1■■■□□ 2.73
IRF3-228ENST00000601291 CEBPAP49715 358 aaPredicted RBP32.09■■■□□ 2.73
IRF3-228ENST00000601291 RALGAPBQ86X10 1494 aa32.08■■■□□ 2.73
IRF3-228ENST00000601291 STAG3Q9UJ98 1225 aa32.07■■■□□ 2.72
IRF3-228ENST00000601291 NLRP1Q9C000 1473 aa32.05■■■□□ 2.72
IRF3-228ENST00000601291 PPLO60437 1756 aa32.05■■■□□ 2.72
IRF3-228ENST00000601291 ZNF316A6NFI3 1004 aaPredicted RBP32.02■■■□□ 2.72
IRF3-228ENST00000601291 TRPM1Q7Z4N2 1603 aa32.02■■■□□ 2.72
IRF3-228ENST00000601291 PLPPR3Q6T4P5 718 aa32.02■■■□□ 2.72
IRF3-228ENST00000601291 NEXMIFQ5QGS0 1516 aa32.01■■■□□ 2.72
IRF3-228ENST00000601291 KDM5AP29375 1690 aaKnown RBP32.01■■■□□ 2.71
IRF3-228ENST00000601291 MYO5BQ9ULV0 1848 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms