RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 NCOA1Q15788 1441 aa18.68■□□□□ 0.58
ZNF548-210ENST00000600442 MLH3Q9UHC1 1453 aa18.68■□□□□ 0.58
ZNF548-210ENST00000600442 SYCP2Q9BX26 1530 aa18.66■□□□□ 0.58
ZNF548-210ENST00000600442 TRIM52Q96A61 297 aa18.66■□□□□ 0.58
ZNF548-210ENST00000600442 ESF1Q9H501 851 aaKnown RBP18.65■□□□□ 0.58
ZNF548-210ENST00000600442 DHX57Q6P158 1386 aaKnown RBP18.65■□□□□ 0.58
ZNF548-210ENST00000600442 TRAPPC8Q9Y2L5 1435 aa18.65■□□□□ 0.58
ZNF548-210ENST00000600442 SPAG9O60271 1321 aaKnown RBP18.64■□□□□ 0.57
ZNF548-210ENST00000600442 AGLP35573 1532 aa18.64■□□□□ 0.57
ZNF548-210ENST00000600442 ABCC1P33527 1531 aa18.63■□□□□ 0.57
ZNF548-210ENST00000600442 CROCC2H7BZ55 1655 aa18.63■□□□□ 0.57
ZNF548-210ENST00000600442 ADGBQ8N7X0 1667 aa18.63■□□□□ 0.57
ZNF548-210ENST00000600442 KIDINS220Q9ULH0 1771 aa18.63■□□□□ 0.57
ZNF548-210ENST00000600442 KIF15Q9NS87 1388 aa18.62■□□□□ 0.57
ZNF548-210ENST00000600442 DISP3Q9P2K9 1392 aa18.62■□□□□ 0.57
ZNF548-210ENST00000600442 PTPRTO14522 1441 aa18.62■□□□□ 0.57
ZNF548-210ENST00000600442 GCC2Q8IWJ2 1684 aa18.62■□□□□ 0.57
ZNF548-210ENST00000600442 ILDR2Q71H61 639 aa18.61■□□□□ 0.57
ZNF548-210ENST00000600442 RTEL1-TNFRSF6BF6WH68 1400 aa18.6■□□□□ 0.57
ZNF548-210ENST00000600442 ANKRD50Q9ULJ7 1429 aa18.6■□□□□ 0.57
ZNF548-210ENST00000600442 MAST1Q9Y2H9 1570 aa18.59■□□□□ 0.57
ZNF548-210ENST00000600442 LTBP4Q8N2S1 1624 aa18.56■□□□□ 0.56
ZNF548-210ENST00000600442 CNTLNQ9NXG0 1405 aa18.56■□□□□ 0.56
ZNF548-210ENST00000600442 SOCS7O14512 581 aa18.53■□□□□ 0.56
ZNF548-210ENST00000600442 MROH2AA6NES4 1674 aa18.53■□□□□ 0.56
ZNF548-210ENST00000600442 MPHOSPH9Q99550 1183 aa18.52■□□□□ 0.56
ZNF548-210ENST00000600442 DUOX2Q9NRD8 1548 aa18.52■□□□□ 0.56
ZNF548-210ENST00000600442 PLXNC1O60486 1568 aa18.51■□□□□ 0.55
ZNF548-210ENST00000600442 SLC4A1APQ9BWU0 796 aaKnown RBP18.51■□□□□ 0.55
ZNF548-210ENST00000600442 TIMELESSQ9UNS1 1208 aa18.51■□□□□ 0.55
ZNF548-210ENST00000600442 CAMSAP1Q5T5Y3 1602 aa18.51■□□□□ 0.55
ZNF548-210ENST00000600442 ZMYM3Q14202 1370 aa18.51■□□□□ 0.55
ZNF548-210ENST00000600442 ERBINQ96RT1 1412 aa18.5■□□□□ 0.55
ZNF548-210ENST00000600442 NPATQ14207 1427 aa18.49■□□□□ 0.55
ZNF548-210ENST00000600442 IQSEC2Q5JU85 1478 aa18.49■□□□□ 0.55
ZNF548-210ENST00000600442 CLTCQ00610 1675 aaKnown RBP18.48■□□□□ 0.55
ZNF548-210ENST00000600442 NCKAP5LQ9HCH0 1330 aa18.48■□□□□ 0.55
ZNF548-210ENST00000600442 SPATA31D1Q6ZQQ2 1576 aa18.47■□□□□ 0.55
ZNF548-210ENST00000600442 NUP155O75694 1391 aa18.47■□□□□ 0.55
ZNF548-210ENST00000600442 ATP7AQ04656 1500 aa18.46■□□□□ 0.55
ZNF548-210ENST00000600442 KANK1Q14678 1352 aa18.42■□□□□ 0.54
ZNF548-210ENST00000600442 INO80Q9ULG1 1556 aaPredicted RBP18.42■□□□□ 0.54
ZNF548-210ENST00000600442 A2MP01023 1474 aa18.42■□□□□ 0.54
ZNF548-210ENST00000600442 GGT6Q6P531 493 aa18.42■□□□□ 0.54
ZNF548-210ENST00000600442 ZNF335Q9H4Z2 1342 aaPredicted RBP18.42■□□□□ 0.54
ZNF548-210ENST00000600442 DHX29Q7Z478 1369 aaKnown RBP18.42■□□□□ 0.54
ZNF548-210ENST00000600442 MYO3AQ8NEV4 1616 aa18.41■□□□□ 0.54
ZNF548-210ENST00000600442 NEUROD1Q13562 356 aa18.41■□□□□ 0.54
ZNF548-210ENST00000600442 ZNF142P52746 1687 aaPredicted RBP18.41■□□□□ 0.54
ZNF548-210ENST00000600442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.54
ZNF548-210ENST00000600442 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.53
ZNF548-210ENST00000600442 PKD2Q13563 968 aa18.39■□□□□ 0.53
ZNF548-210ENST00000600442 CEP170BQ9Y4F5 1589 aaPredicted RBP18.38■□□□□ 0.53
ZNF548-210ENST00000600442 PLA2R1Q13018 1463 aa18.38■□□□□ 0.53
ZNF548-210ENST00000600442 KDM5DQ9BY66 1539 aa18.38■□□□□ 0.53
ZNF548-210ENST00000600442 TONSLQ96HA7 1378 aa18.37■□□□□ 0.53
ZNF548-210ENST00000600442 KIF3BO15066 747 aa18.36■□□□□ 0.53
ZNF548-210ENST00000600442 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
ZNF548-210ENST00000600442 PZPP20742 1482 aa18.34■□□□□ 0.53
ZNF548-210ENST00000600442 SIN3AQ96ST3 1273 aa18.33■□□□□ 0.52
ZNF548-210ENST00000600442 UNC13BO14795 1591 aa18.32■□□□□ 0.52
ZNF548-210ENST00000600442 EIF2AK4Q9P2K8 1649 aaKnown RBP18.31■□□□□ 0.52
ZNF548-210ENST00000600442 ANKRD30BQ9BXX2 1392 aa18.3■□□□□ 0.52
ZNF548-210ENST00000600442 FAM135AQ9P2D6 1515 aa18.3■□□□□ 0.52
ZNF548-210ENST00000600442 A2ML1A8K2U0 1454 aa18.3■□□□□ 0.52
ZNF548-210ENST00000600442 POLR1AO95602 1720 aaPredicted RBP18.27■□□□□ 0.52
ZNF548-210ENST00000600442 FOXD1Q16676 465 aa18.27■□□□□ 0.52
ZNF548-210ENST00000600442 FBXO31Q5XUX0 539 aaPredicted RBP18.27■□□□□ 0.52
ZNF548-210ENST00000600442 IQGAP3Q86VI3 1631 aa18.26■□□□□ 0.51
ZNF548-210ENST00000600442 TNRQ92752 1358 aa18.23■□□□□ 0.51
ZNF548-210ENST00000600442 NEURL4Q96JN8 1562 aa18.22■□□□□ 0.51
ZNF548-210ENST00000600442 RPRD2Q5VT52 1461 aaKnown RBP18.22■□□□□ 0.51
ZNF548-210ENST00000600442 HSPA1LP34931 641 aa18.22■□□□□ 0.51
ZNF548-210ENST00000600442 PIP4K2BP78356 416 aa18.22■□□□□ 0.51
ZNF548-210ENST00000600442 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
ZNF548-210ENST00000600442 WASHC2CQ9Y4E1 1318 aa18.22■□□□□ 0.51
ZNF548-210ENST00000600442 DEPDC5O75140 1603 aa18.21■□□□□ 0.51
ZNF548-210ENST00000600442 PPP1R15AO75807 674 aaPredicted RBP18.21■□□□□ 0.51
ZNF548-210ENST00000600442 CCDC144AA2RUR9 1427 aa18.21■□□□□ 0.51
ZNF548-210ENST00000600442 PRDM15P57071 1507 aaPredicted RBP18.2■□□□□ 0.5
ZNF548-210ENST00000600442 TOM1O60784 492 aa18.2■□□□□ 0.5
ZNF548-210ENST00000600442 CPS1P31327 1500 aa18.19■□□□□ 0.5
ZNF548-210ENST00000600442 ANKLE2Q86XL3 938 aa18.19■□□□□ 0.5
ZNF548-210ENST00000600442 RNF17Q9BXT8 1623 aaKnown RBP18.17■□□□□ 0.5
ZNF548-210ENST00000600442 THEMISQ8N1K5 641 aaPredicted RBP18.17■□□□□ 0.5
ZNF548-210ENST00000600442 LMTK2Q8IWU2 1503 aa18.16■□□□□ 0.5
ZNF548-210ENST00000600442 VWDEQ8N2E2 1590 aa18.15■□□□□ 0.5
ZNF548-210ENST00000600442 CFAP65Q6ZU64 1925 aaKnown RBP18.15■□□□□ 0.5
ZNF548-210ENST00000600442 MED1Q15648 1581 aaPredicted RBP18.14■□□□□ 0.49
ZNF548-210ENST00000600442 ZNF316A6NFI3 1004 aaPredicted RBP18.14■□□□□ 0.49
ZNF548-210ENST00000600442 L3MBTL2Q969R5 705 aa18.14■□□□□ 0.49
ZNF548-210ENST00000600442 TET3O43151 1660 aa18.14■□□□□ 0.49
ZNF548-210ENST00000600442 NLRP1Q9C000 1473 aa18.14■□□□□ 0.49
ZNF548-210ENST00000600442 UGGT1Q9NYU2 1555 aa18.13■□□□□ 0.49
ZNF548-210ENST00000600442 STAC3Q96MF2 364 aa18.12■□□□□ 0.49
ZNF548-210ENST00000600442 NPHP4O75161 1426 aaPredicted RBP18.12■□□□□ 0.49
ZNF548-210ENST00000600442 MED14O60244 1454 aa18.12■□□□□ 0.49
ZNF548-210ENST00000600442 STRCP1A6NGW2 1772 aa18.09■□□□□ 0.49
ZNF548-210ENST00000600442 IQGAP1P46940 1657 aa18.09■□□□□ 0.49
ZNF548-210ENST00000600442 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms