RNA–Protein interactions for RNA: ENST00000599479.1

TMEM38A-203, Transcript of transmembrane protein 38A, humanhuman

TSL 3

Gene TMEM38A, Length 410 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-203ENST00000599479 ERBINQ96RT1 1412 aa18.67■□□□□ 0.58
TMEM38A-203ENST00000599479 FAM135AQ9P2D6 1515 aa18.67■□□□□ 0.58
TMEM38A-203ENST00000599479 ROCK1Q13464 1354 aa18.66■□□□□ 0.58
TMEM38A-203ENST00000599479 WASHC2CQ9Y4E1 1318 aa18.65■□□□□ 0.58
TMEM38A-203ENST00000599479 NPATQ14207 1427 aa18.65■□□□□ 0.58
TMEM38A-203ENST00000599479 LMTK3Q96Q04 1460 aa18.65■□□□□ 0.58
TMEM38A-203ENST00000599479 EIF2AK4Q9P2K8 1649 aaKnown RBP18.64■□□□□ 0.57
TMEM38A-203ENST00000599479 MROH2AA6NES4 1674 aa18.64■□□□□ 0.57
TMEM38A-203ENST00000599479 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
TMEM38A-203ENST00000599479 RNF17Q9BXT8 1623 aaKnown RBP18.63■□□□□ 0.57
TMEM38A-203ENST00000599479 C3P01024 1663 aa18.63■□□□□ 0.57
TMEM38A-203ENST00000599479 SETD1BQ9UPS6 1966 aaKnown RBP18.62■□□□□ 0.57
TMEM38A-203ENST00000599479 KDM5DQ9BY66 1539 aa18.61■□□□□ 0.57
TMEM38A-203ENST00000599479 MROH1Q8NDA8 1641 aa18.6■□□□□ 0.57
TMEM38A-203ENST00000599479 ANKRD50Q9ULJ7 1429 aa18.59■□□□□ 0.57
TMEM38A-203ENST00000599479 CLTCQ00610 1675 aaKnown RBP18.59■□□□□ 0.57
TMEM38A-203ENST00000599479 ABCC3O15438 1527 aa18.56■□□□□ 0.56
TMEM38A-203ENST00000599479 FBXO31Q5XUX0 539 aaPredicted RBP18.56■□□□□ 0.56
TMEM38A-203ENST00000599479 PZPP20742 1482 aa18.56■□□□□ 0.56
TMEM38A-203ENST00000599479 PRDM15P57071 1507 aaPredicted RBP18.55■□□□□ 0.56
TMEM38A-203ENST00000599479 ITGAEP38570 1179 aa18.55■□□□□ 0.56
TMEM38A-203ENST00000599479 DEPDC5O75140 1603 aa18.55■□□□□ 0.56
TMEM38A-203ENST00000599479 UHRF1BP1Q6BDS2 1440 aa18.55■□□□□ 0.56
TMEM38A-203ENST00000599479 HSPA2P54652 639 aa18.54■□□□□ 0.56
TMEM38A-203ENST00000599479 ARHGAP31Q2M1Z3 1444 aa18.54■□□□□ 0.56
TMEM38A-203ENST00000599479 VWDEQ8N2E2 1590 aa18.53■□□□□ 0.56
TMEM38A-203ENST00000599479 PREX1Q8TCU6 1659 aa18.51■□□□□ 0.55
TMEM38A-203ENST00000599479 LMTK2Q8IWU2 1503 aa18.51■□□□□ 0.55
TMEM38A-203ENST00000599479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.51■□□□□ 0.55
TMEM38A-203ENST00000599479 ZC3H13Q5T200 1668 aaKnown RBP18.5■□□□□ 0.55
TMEM38A-203ENST00000599479 KANK1Q14678 1352 aa18.5■□□□□ 0.55
TMEM38A-203ENST00000599479 TNRQ92752 1358 aa18.49■□□□□ 0.55
TMEM38A-203ENST00000599479 NAIPQ13075 1403 aa18.47■□□□□ 0.55
TMEM38A-203ENST00000599479 SPATA31D1Q6ZQQ2 1576 aa18.45■□□□□ 0.54
TMEM38A-203ENST00000599479 HFM1A2PYH4 1435 aa18.44■□□□□ 0.54
TMEM38A-203ENST00000599479 ERVK-7P63135 1459 aa18.44■□□□□ 0.54
TMEM38A-203ENST00000599479 A2ML1A8K2U0 1454 aa18.43■□□□□ 0.54
TMEM38A-203ENST00000599479 NLRP1Q9C000 1473 aa18.43■□□□□ 0.54
TMEM38A-203ENST00000599479 CAMSAP1Q5T5Y3 1602 aa18.42■□□□□ 0.54
TMEM38A-203ENST00000599479 UNC13BO14795 1591 aa18.42■□□□□ 0.54
TMEM38A-203ENST00000599479 CEP152O94986 1710 aa18.41■□□□□ 0.54
TMEM38A-203ENST00000599479 MYO3AQ8NEV4 1616 aa18.41■□□□□ 0.54
TMEM38A-203ENST00000599479 CEP170BQ9Y4F5 1589 aaPredicted RBP18.4■□□□□ 0.54
TMEM38A-203ENST00000599479 NUP155O75694 1391 aa18.4■□□□□ 0.54
TMEM38A-203ENST00000599479 NOS1P29475 1434 aa18.4■□□□□ 0.54
TMEM38A-203ENST00000599479 ZNF142P52746 1687 aaPredicted RBP18.39■□□□□ 0.53
TMEM38A-203ENST00000599479 DMRT2Q9Y5R5 561 aa18.39■□□□□ 0.53
TMEM38A-203ENST00000599479 PLA2R1Q13018 1463 aa18.39■□□□□ 0.53
TMEM38A-203ENST00000599479 RPRD2Q5VT52 1461 aaKnown RBP18.39■□□□□ 0.53
TMEM38A-203ENST00000599479 EFCAB6Q5THR3 1501 aa18.39■□□□□ 0.53
TMEM38A-203ENST00000599479 THEMISQ8N1K5 641 aaPredicted RBP18.38■□□□□ 0.53
TMEM38A-203ENST00000599479 PKD2Q13563 968 aa18.36■□□□□ 0.53
TMEM38A-203ENST00000599479 STRCQ7RTU9 1775 aa18.36■□□□□ 0.53
TMEM38A-203ENST00000599479 PTPRTO14522 1441 aa18.35■□□□□ 0.53
TMEM38A-203ENST00000599479 IDI1Q13907 227 aa18.35■□□□□ 0.53
TMEM38A-203ENST00000599479 SLC52A1Q9NWF4 448 aa18.35■□□□□ 0.53
TMEM38A-203ENST00000599479 IQGAP3Q86VI3 1631 aa18.34■□□□□ 0.53
TMEM38A-203ENST00000599479 TET3O43151 1660 aa18.33■□□□□ 0.52
TMEM38A-203ENST00000599479 NCKAP5LQ9HCH0 1330 aa18.32■□□□□ 0.52
TMEM38A-203ENST00000599479 UGGT1Q9NYU2 1555 aa18.32■□□□□ 0.52
TMEM38A-203ENST00000599479 GCC2Q8IWJ2 1684 aa18.31■□□□□ 0.52
TMEM38A-203ENST00000599479 SYNMO15061 1565 aa18.3■□□□□ 0.52
TMEM38A-203ENST00000599479 ANKLE2Q86XL3 938 aa18.29■□□□□ 0.52
TMEM38A-203ENST00000599479 ACIN1Q9UKV3 1341 aaKnown RBP18.28■□□□□ 0.52
TMEM38A-203ENST00000599479 CFAP65Q6ZU64 1925 aaKnown RBP18.28■□□□□ 0.52
TMEM38A-203ENST00000599479 ARHGAP23Q9P227 1491 aa18.26■□□□□ 0.51
TMEM38A-203ENST00000599479 E9PCH4 1651 aa18.25■□□□□ 0.51
TMEM38A-203ENST00000599479 SETD5Q9C0A6 1442 aa18.25■□□□□ 0.51
TMEM38A-203ENST00000599479 MED14O60244 1454 aa18.25■□□□□ 0.51
TMEM38A-203ENST00000599479 SLIT1O75093 1534 aa18.24■□□□□ 0.51
TMEM38A-203ENST00000599479 HRCP23327 699 aa18.24■□□□□ 0.51
TMEM38A-203ENST00000599479 TRIM52Q96A61 297 aa18.24■□□□□ 0.51
TMEM38A-203ENST00000599479 TMEM2Q9UHN6 1383 aa18.24■□□□□ 0.51
TMEM38A-203ENST00000599479 UBR1Q8IWV7 1749 aa18.23■□□□□ 0.51
TMEM38A-203ENST00000599479 KDM5AP29375 1690 aaKnown RBP18.23■□□□□ 0.51
TMEM38A-203ENST00000599479 LTKP29376 864 aa18.23■□□□□ 0.51
TMEM38A-203ENST00000599479 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
TMEM38A-203ENST00000599479 PIK3C2BO00750 1634 aa18.22■□□□□ 0.51
TMEM38A-203ENST00000599479 NEURL4Q96JN8 1562 aa18.21■□□□□ 0.51
TMEM38A-203ENST00000599479 TXNDC2Q86VQ3 553 aa18.2■□□□□ 0.5
TMEM38A-203ENST00000599479 STAG3Q9UJ98 1225 aa18.2■□□□□ 0.5
TMEM38A-203ENST00000599479 MPHOSPH9Q99550 1183 aa18.19■□□□□ 0.5
TMEM38A-203ENST00000599479 RAB3GAP2Q9H2M9 1393 aa18.18■□□□□ 0.5
TMEM38A-203ENST00000599479 NPHP4O75161 1426 aaPredicted RBP18.18■□□□□ 0.5
TMEM38A-203ENST00000599479 ADGRB3O60242 1522 aa18.18■□□□□ 0.5
TMEM38A-203ENST00000599479 EID1Q9Y6B2 187 aa18.17■□□□□ 0.5
TMEM38A-203ENST00000599479 SCAF11Q99590 1463 aaKnown RBP18.17■□□□□ 0.5
TMEM38A-203ENST00000599479 TMEM131LA2VDJ0 1609 aa18.16■□□□□ 0.5
TMEM38A-203ENST00000599479 CERKQ8TCT0 537 aa18.15■□□□□ 0.5
TMEM38A-203ENST00000599479 LTBP4Q8N2S1 1624 aa18.15■□□□□ 0.5
TMEM38A-203ENST00000599479 ZFYVE9O95405 1425 aa18.15■□□□□ 0.5
TMEM38A-203ENST00000599479 POLR1AO95602 1720 aaPredicted RBP18.13■□□□□ 0.49
TMEM38A-203ENST00000599479 HDGFP51858 240 aaKnown RBP18.13■□□□□ 0.49
TMEM38A-203ENST00000599479 ZNF335Q9H4Z2 1342 aaPredicted RBP18.13■□□□□ 0.49
TMEM38A-203ENST00000599479 TRPM2O94759 1503 aa18.13■□□□□ 0.49
TMEM38A-203ENST00000599479 SPHKAPQ2M3C7 1700 aa18.1■□□□□ 0.49
TMEM38A-203ENST00000599479 RIMS2Q9UQ26 1411 aa18.1■□□□□ 0.49
TMEM38A-203ENST00000599479 FOXD1Q16676 465 aa18.1■□□□□ 0.49
TMEM38A-203ENST00000599479 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.1■□□□□ 0.49
TMEM38A-203ENST00000599479 CHGAP10645 457 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms