RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 ROCK1Q13464 1354 aa30.39■■■□□ 2.45
IRF3-221ENST00000598808 ANKRD50Q9ULJ7 1429 aa30.34■■■□□ 2.45
IRF3-221ENST00000598808 CLTCQ00610 1675 aaKnown RBP30.33■■■□□ 2.45
IRF3-221ENST00000598808 RNF17Q9BXT8 1623 aaKnown RBP30.33■■■□□ 2.45
IRF3-221ENST00000598808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.31■■■□□ 2.445e-6■■■□□ 18.6
IRF3-221ENST00000598808 CNTLNQ9NXG0 1405 aa30.3■■■□□ 2.44
IRF3-221ENST00000598808 WASHC2CQ9Y4E1 1318 aa30.28■■■□□ 2.44
IRF3-221ENST00000598808 KDM5DQ9BY66 1539 aa30.27■■■□□ 2.44
IRF3-221ENST00000598808 CEBPAP49715 358 aaPredicted RBP30.25■■■□□ 2.43
IRF3-221ENST00000598808 MROH1Q8NDA8 1641 aa30.24■■■□□ 2.43
IRF3-221ENST00000598808 PPP6R1Q9UPN7 881 aa30.24■■■□□ 2.43
IRF3-221ENST00000598808 KANK1Q14678 1352 aa30.23■■■□□ 2.43
IRF3-221ENST00000598808 LMTK3Q96Q04 1460 aa30.23■■■□□ 2.43
IRF3-221ENST00000598808 MROH2AA6NES4 1674 aa30.23■■■□□ 2.43
IRF3-221ENST00000598808 GCC2Q8IWJ2 1684 aa30.23■■■□□ 2.43
IRF3-221ENST00000598808 PRDM15P57071 1507 aaPredicted RBP30.22■■■□□ 2.43
IRF3-221ENST00000598808 DEPDC5O75140 1603 aa30.22■■■□□ 2.43
IRF3-221ENST00000598808 C3P01024 1663 aa30.22■■■□□ 2.43
IRF3-221ENST00000598808 CEP152O94986 1710 aa30.21■■■□□ 2.43
IRF3-221ENST00000598808 FAM135AQ9P2D6 1515 aa30.2■■■□□ 2.43
IRF3-221ENST00000598808 ZC3H13Q5T200 1668 aaKnown RBP30.19■■■□□ 2.42
IRF3-221ENST00000598808 ABCC3O15438 1527 aa30.19■■■□□ 2.42
IRF3-221ENST00000598808 NAIPQ13075 1403 aa30.19■■■□□ 2.42
IRF3-221ENST00000598808 ZMYM3Q14202 1370 aa30.19■■■□□ 2.42
IRF3-221ENST00000598808 HFM1A2PYH4 1435 aa30.17■■■□□ 2.42
IRF3-221ENST00000598808 UNC13BO14795 1591 aa30.13■■■□□ 2.41
IRF3-221ENST00000598808 CAMSAP1Q5T5Y3 1602 aa30.13■■■□□ 2.41
IRF3-221ENST00000598808 PREX1Q8TCU6 1659 aa30.11■■■□□ 2.41
IRF3-221ENST00000598808 NUP155O75694 1391 aa30.07■■■□□ 2.4
IRF3-221ENST00000598808 VWDEQ8N2E2 1590 aa30.06■■■□□ 2.4
IRF3-221ENST00000598808 PZPP20742 1482 aa30.05■■■□□ 2.4
IRF3-221ENST00000598808 TRIM52Q96A61 297 aa30.05■■■□□ 2.4
IRF3-221ENST00000598808 SETD1BQ9UPS6 1966 aaKnown RBP30.04■■■□□ 2.4
IRF3-221ENST00000598808 HSPA2P54652 639 aa30.03■■■□□ 2.4
IRF3-221ENST00000598808 FBXO31Q5XUX0 539 aaPredicted RBP30.02■■■□□ 2.4
IRF3-221ENST00000598808 NPATQ14207 1427 aa30.02■■■□□ 2.4
IRF3-221ENST00000598808 LMTK2Q8IWU2 1503 aa30.01■■■□□ 2.4
IRF3-221ENST00000598808 TRIM26Q12899 539 aaPredicted RBP30.01■■■□□ 2.4
IRF3-221ENST00000598808 IQGAP3Q86VI3 1631 aa30.01■■■□□ 2.39
IRF3-221ENST00000598808 SETD5Q9C0A6 1442 aa30■■■□□ 2.39
IRF3-221ENST00000598808 EFCAB6Q5THR3 1501 aa29.99■■■□□ 2.39
IRF3-221ENST00000598808 TET3O43151 1660 aa29.99■■■□□ 2.39
IRF3-221ENST00000598808 CFAP65Q6ZU64 1925 aaKnown RBP29.99■■■□□ 2.39
IRF3-221ENST00000598808 UHRF1BP1Q6BDS2 1440 aa29.98■■■□□ 2.39
IRF3-221ENST00000598808 TNRQ92752 1358 aa29.96■■■□□ 2.39
IRF3-221ENST00000598808 MYO3AQ8NEV4 1616 aa29.94■■■□□ 2.38
IRF3-221ENST00000598808 ERVK-7P63135 1459 aa29.94■■■□□ 2.38
IRF3-221ENST00000598808 ARHGAP31Q2M1Z3 1444 aa29.93■■■□□ 2.38
IRF3-221ENST00000598808 RAB3GAP2Q9H2M9 1393 aa29.92■■■□□ 2.38
IRF3-221ENST00000598808 SPATA31D1Q6ZQQ2 1576 aa29.9■■■□□ 2.38
IRF3-221ENST00000598808 E9PCH4 1651 aa29.88■■■□□ 2.37
IRF3-221ENST00000598808 RPRD2Q5VT52 1461 aaKnown RBP29.86■■■□□ 2.37
IRF3-221ENST00000598808 SLC4A1APQ9BWU0 796 aaKnown RBP29.86■■■□□ 2.37
IRF3-221ENST00000598808 PCGF6Q9BYE7 350 aa29.85■■■□□ 2.37
IRF3-221ENST00000598808 CEP170BQ9Y4F5 1589 aaPredicted RBP29.84■■■□□ 2.37
IRF3-221ENST00000598808 STRCQ7RTU9 1775 aa29.83■■■□□ 2.37
IRF3-221ENST00000598808 ZNF142P52746 1687 aaPredicted RBP29.82■■■□□ 2.36
IRF3-221ENST00000598808 NLRP1Q9C000 1473 aa29.81■■■□□ 2.36
IRF3-221ENST00000598808 A2ML1A8K2U0 1454 aa29.79■■■□□ 2.36
IRF3-221ENST00000598808 PKD2Q13563 968 aa29.79■■■□□ 2.36
IRF3-221ENST00000598808 SYNMO15061 1565 aa29.78■■■□□ 2.36
IRF3-221ENST00000598808 ACIN1Q9UKV3 1341 aaKnown RBP29.78■■■□□ 2.36
IRF3-221ENST00000598808 NOS1P29475 1434 aa29.76■■■□□ 2.35
IRF3-221ENST00000598808 STAG3Q9UJ98 1225 aa29.74■■■□□ 2.35
IRF3-221ENST00000598808 MPHOSPH9Q99550 1183 aa29.74■■■□□ 2.35
IRF3-221ENST00000598808 SPHKAPQ2M3C7 1700 aa29.73■■■□□ 2.35
IRF3-221ENST00000598808 UGGT1Q9NYU2 1555 aa29.73■■■□□ 2.35
IRF3-221ENST00000598808 PIK3C2BO00750 1634 aa29.71■■■□□ 2.35
IRF3-221ENST00000598808 FOXD1Q16676 465 aa29.71■■■□□ 2.35
IRF3-221ENST00000598808 CHGAP10645 457 aaKnown RBP29.68■■■□□ 2.34
IRF3-221ENST00000598808 IDI1Q13907 227 aa29.68■■■□□ 2.34
IRF3-221ENST00000598808 SLC52A1Q9NWF4 448 aa29.67■■■□□ 2.34
IRF3-221ENST00000598808 UBR1Q8IWV7 1749 aa29.66■■■□□ 2.34
IRF3-221ENST00000598808 HRCP23327 699 aa29.65■■■□□ 2.34
IRF3-221ENST00000598808 THEMISQ8N1K5 641 aaPredicted RBP29.65■■■□□ 2.34
IRF3-221ENST00000598808 ADGRB3O60242 1522 aa29.63■■■□□ 2.33
IRF3-221ENST00000598808 TRPM2O94759 1503 aa29.63■■■□□ 2.33
IRF3-221ENST00000598808 PLA2R1Q13018 1463 aa29.63■■■□□ 2.33
IRF3-221ENST00000598808 PTPRTO14522 1441 aa29.61■■■□□ 2.33
IRF3-221ENST00000598808 CLTCL1P53675 1640 aa29.58■■■□□ 2.33
IRF3-221ENST00000598808 DMRT2Q9Y5R5 561 aa29.58■■■□□ 2.33
IRF3-221ENST00000598808 NCKAP5LQ9HCH0 1330 aa29.57■■■□□ 2.32
IRF3-221ENST00000598808 KDM5AP29375 1690 aaKnown RBP29.55■■■□□ 2.32
IRF3-221ENST00000598808 MYO5BQ9ULV0 1848 aa29.55■■■□□ 2.32
IRF3-221ENST00000598808 POLR1AO95602 1720 aaPredicted RBP29.54■■■□□ 2.32
IRF3-221ENST00000598808 TMEM131LA2VDJ0 1609 aa29.53■■■□□ 2.32
IRF3-221ENST00000598808 CCDC144AA2RUR9 1427 aa29.52■■■□□ 2.32
IRF3-221ENST00000598808 ILDR1Q86SU0 546 aaPredicted RBP29.52■■■□□ 2.32
IRF3-221ENST00000598808 ANKLE2Q86XL3 938 aa29.52■■■□□ 2.32
IRF3-221ENST00000598808 ZNF326Q5BKZ1 582 aaKnown RBP29.5■■■□□ 2.31
IRF3-221ENST00000598808 KIF1BO60333 1816 aa29.5■■■□□ 2.31
IRF3-221ENST00000598808 TMEM2Q9UHN6 1383 aa29.5■■■□□ 2.31
IRF3-221ENST00000598808 EID1Q9Y6B2 187 aa29.49■■■□□ 2.31
IRF3-221ENST00000598808 NEURL4Q96JN8 1562 aa29.47■■■□□ 2.31
IRF3-221ENST00000598808 SLIT1O75093 1534 aa29.47■■■□□ 2.31
IRF3-221ENST00000598808 TXNDC2Q86VQ3 553 aa29.47■■■□□ 2.31
IRF3-221ENST00000598808 SCAF11Q99590 1463 aaKnown RBP29.45■■■□□ 2.31
IRF3-221ENST00000598808 PPP1R15AO75807 674 aaPredicted RBP29.45■■■□□ 2.31
IRF3-221ENST00000598808 ARHGAP23Q9P227 1491 aa29.45■■■□□ 2.3
IRF3-221ENST00000598808 RIMS2Q9UQ26 1411 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms