RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-222ENST00000598256 DEPDC5O75140 1603 aa23.78■■□□□ 1.4
LTBP4-222ENST00000598256 UNC13BO14795 1591 aa23.78■■□□□ 1.4
LTBP4-222ENST00000598256 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
LTBP4-222ENST00000598256 RNF17Q9BXT8 1623 aaKnown RBP23.77■■□□□ 1.4
LTBP4-222ENST00000598256 AGLP35573 1532 aa23.77■■□□□ 1.4
LTBP4-222ENST00000598256 LMTK3Q96Q04 1460 aa23.76■■□□□ 1.39
LTBP4-222ENST00000598256 MADDQ8WXG6 1647 aa23.73■■□□□ 1.39
LTBP4-222ENST00000598256 MROH1Q8NDA8 1641 aa23.71■■□□□ 1.39
LTBP4-222ENST00000598256 PRDM15P57071 1507 aaPredicted RBP23.71■■□□□ 1.39
LTBP4-222ENST00000598256 KIF3BO15066 747 aa23.7■■□□□ 1.38
LTBP4-222ENST00000598256 CEP152O94986 1710 aa23.7■■□□□ 1.38
LTBP4-222ENST00000598256 ARID4BQ4LE39 1312 aaPredicted RBP23.69■■□□□ 1.38
LTBP4-222ENST00000598256 IQGAP3Q86VI3 1631 aa23.68■■□□□ 1.38
LTBP4-222ENST00000598256 ZC3H13Q5T200 1668 aaKnown RBP23.67■■□□□ 1.38
LTBP4-222ENST00000598256 KDM5DQ9BY66 1539 aa23.65■■□□□ 1.38
LTBP4-222ENST00000598256 ACIN1Q9UKV3 1341 aaKnown RBP23.64■■□□□ 1.38
LTBP4-222ENST00000598256 HSPA2P54652 639 aa23.64■■□□□ 1.37
LTBP4-222ENST00000598256 TRIM52Q96A61 297 aa23.64■■□□□ 1.37
LTBP4-222ENST00000598256 FER1L4A9Z1Z3 1794 aa23.64■■□□□ 1.37
LTBP4-222ENST00000598256 HRCP23327 699 aa23.62■■□□□ 1.37
LTBP4-222ENST00000598256 KANK1Q14678 1352 aa23.62■■□□□ 1.37
LTBP4-222ENST00000598256 VWDEQ8N2E2 1590 aa23.61■■□□□ 1.37
LTBP4-222ENST00000598256 CLTCQ00610 1675 aaKnown RBP23.61■■□□□ 1.37
LTBP4-222ENST00000598256 GGT6Q6P531 493 aa23.61■■□□□ 1.37
LTBP4-222ENST00000598256 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.61■■□□□ 1.37
LTBP4-222ENST00000598256 TET3O43151 1660 aa23.6■■□□□ 1.37
LTBP4-222ENST00000598256 FAM135AQ9P2D6 1515 aa23.6■■□□□ 1.37
LTBP4-222ENST00000598256 RIMS1Q86UR5 1692 aaKnown RBP23.6■■□□□ 1.37
LTBP4-222ENST00000598256 CAMSAP1Q5T5Y3 1602 aa23.59■■□□□ 1.37
LTBP4-222ENST00000598256 NUP155O75694 1391 aa23.59■■□□□ 1.37
LTBP4-222ENST00000598256 MLECQ14165 292 aa23.58■■□□□ 1.37
LTBP4-222ENST00000598256 PZPP20742 1482 aa23.56■■□□□ 1.36
LTBP4-222ENST00000598256 ABCC3O15438 1527 aa23.56■■□□□ 1.36
LTBP4-222ENST00000598256 MROH2AA6NES4 1674 aa23.54■■□□□ 1.36
LTBP4-222ENST00000598256 CERKQ8TCT0 537 aa23.54■■□□□ 1.36
LTBP4-222ENST00000598256 E9PCH4 1651 aa23.54■■□□□ 1.36
LTBP4-222ENST00000598256 LMTK2Q8IWU2 1503 aa23.54■■□□□ 1.36
LTBP4-222ENST00000598256 PLPPR3Q6T4P5 718 aa23.52■■□□□ 1.36
LTBP4-222ENST00000598256 EFCAB6Q5THR3 1501 aa23.52■■□□□ 1.36
LTBP4-222ENST00000598256 CFAP65Q6ZU64 1925 aaKnown RBP23.51■■□□□ 1.35
LTBP4-222ENST00000598256 WASHC2CQ9Y4E1 1318 aa23.5■■□□□ 1.35
LTBP4-222ENST00000598256 SLC4A1APQ9BWU0 796 aaKnown RBP23.49■■□□□ 1.35
LTBP4-222ENST00000598256 ESF1Q9H501 851 aaKnown RBP23.49■■□□□ 1.35
LTBP4-222ENST00000598256 PPP6R1Q9UPN7 881 aa23.48■■□□□ 1.35
LTBP4-222ENST00000598256 DHX57Q6P158 1386 aaKnown RBP23.47■■□□□ 1.35
LTBP4-222ENST00000598256 CNTLNQ9NXG0 1405 aa23.47■■□□□ 1.35
LTBP4-222ENST00000598256 SPHKAPQ2M3C7 1700 aa23.47■■□□□ 1.35
LTBP4-222ENST00000598256 MPHOSPH9Q99550 1183 aa23.46■■□□□ 1.35
LTBP4-222ENST00000598256 C3P01024 1663 aa23.45■■□□□ 1.34
LTBP4-222ENST00000598256 PREX1Q8TCU6 1659 aa23.44■■□□□ 1.34
LTBP4-222ENST00000598256 ILDR2Q71H61 639 aa23.42■■□□□ 1.34
LTBP4-222ENST00000598256 RPRD2Q5VT52 1461 aaKnown RBP23.41■■□□□ 1.34
LTBP4-222ENST00000598256 PKD2Q13563 968 aa23.4■■□□□ 1.34
LTBP4-222ENST00000598256 NPATQ14207 1427 aa23.39■■□□□ 1.33
LTBP4-222ENST00000598256 ARHGAP31Q2M1Z3 1444 aa23.38■■□□□ 1.33
LTBP4-222ENST00000598256 FOXD1Q16676 465 aa23.34■■□□□ 1.33
LTBP4-222ENST00000598256 CCER1Q8TC90 406 aaPredicted RBP23.34■■□□□ 1.33
LTBP4-222ENST00000598256 ZMYM3Q14202 1370 aa23.34■■□□□ 1.33
LTBP4-222ENST00000598256 CEBPAP49715 358 aaPredicted RBP23.33■■□□□ 1.33
LTBP4-222ENST00000598256 TRPM2O94759 1503 aa23.33■■□□□ 1.32
LTBP4-222ENST00000598256 SPATA31D1Q6ZQQ2 1576 aa23.32■■□□□ 1.32
LTBP4-222ENST00000598256 ERVK-7P63135 1459 aa23.32■■□□□ 1.32
LTBP4-222ENST00000598256 DISP3Q9P2K9 1392 aa23.32■■□□□ 1.32
LTBP4-222ENST00000598256 SOCS7O14512 581 aa23.31■■□□□ 1.32
LTBP4-222ENST00000598256 SYNMO15061 1565 aa23.31■■□□□ 1.32
LTBP4-222ENST00000598256 KIF1BO60333 1816 aa23.29■■□□□ 1.32
LTBP4-222ENST00000598256 CLTCL1P53675 1640 aa23.29■■□□□ 1.32
LTBP4-222ENST00000598256 STRCQ7RTU9 1775 aa23.27■■□□□ 1.32
LTBP4-222ENST00000598256 NOS1P29475 1434 aa23.27■■□□□ 1.32
LTBP4-222ENST00000598256 PIK3C2BO00750 1634 aa23.26■■□□□ 1.31
LTBP4-222ENST00000598256 PTPRTO14522 1441 aa23.26■■□□□ 1.31
LTBP4-222ENST00000598256 ANKRD30BQ9BXX2 1392 aa23.26■■□□□ 1.31
LTBP4-222ENST00000598256 UGGT1Q9NYU2 1555 aa23.25■■□□□ 1.31
LTBP4-222ENST00000598256 PLA2R1Q13018 1463 aa23.24■■□□□ 1.31
LTBP4-222ENST00000598256 MYO3AQ8NEV4 1616 aa23.24■■□□□ 1.31
LTBP4-222ENST00000598256 CLSPNQ9HAW4 1339 aa23.24■■□□□ 1.31
LTBP4-222ENST00000598256 CCDC144AA2RUR9 1427 aa23.24■■□□□ 1.31
LTBP4-222ENST00000598256 FBXO31Q5XUX0 539 aaPredicted RBP23.23■■□□□ 1.31
LTBP4-222ENST00000598256 DMRT2Q9Y5R5 561 aa23.23■■□□□ 1.31
LTBP4-222ENST00000598256 MYO5BQ9ULV0 1848 aa23.22■■□□□ 1.31
LTBP4-222ENST00000598256 TNRQ92752 1358 aa23.2■■□□□ 1.3
LTBP4-222ENST00000598256 SETD1BQ9UPS6 1966 aaKnown RBP23.2■■□□□ 1.3
LTBP4-222ENST00000598256 UHRF1BP1Q6BDS2 1440 aa23.17■■□□□ 1.3
LTBP4-222ENST00000598256 ZNF142P52746 1687 aaPredicted RBP23.17■■□□□ 1.3
LTBP4-222ENST00000598256 KDM5AP29375 1690 aaKnown RBP23.15■■□□□ 1.3
LTBP4-222ENST00000598256 UBR1Q8IWV7 1749 aa23.14■■□□□ 1.3
LTBP4-222ENST00000598256 NLRP1Q9C000 1473 aa23.14■■□□□ 1.29
LTBP4-222ENST00000598256 ADGRB3O60242 1522 aa23.13■■□□□ 1.29
LTBP4-222ENST00000598256 TMEM131LA2VDJ0 1609 aa23.13■■□□□ 1.29
LTBP4-222ENST00000598256 SIN3AQ96ST3 1273 aa23.13■■□□□ 1.29
LTBP4-222ENST00000598256 NEUROD1Q13562 356 aa23.12■■□□□ 1.29
LTBP4-222ENST00000598256 SLC52A1Q9NWF4 448 aa23.12■■□□□ 1.29
LTBP4-222ENST00000598256 CEP170BQ9Y4F5 1589 aaPredicted RBP23.12■■□□□ 1.29
LTBP4-222ENST00000598256 LTBP4Q8N2S1 1624 aa23.11■■□□□ 1.29
LTBP4-222ENST00000598256 NEURL4Q96JN8 1562 aa23.1■■□□□ 1.29
LTBP4-222ENST00000598256 IFT172Q9UG01 1749 aa23.08■■□□□ 1.29
LTBP4-222ENST00000598256 IDI1Q13907 227 aa23.08■■□□□ 1.29
LTBP4-222ENST00000598256 CHGAP10645 457 aaKnown RBP23.07■■□□□ 1.28
LTBP4-222ENST00000598256 PPLO60437 1756 aa23.06■■□□□ 1.28
LTBP4-222ENST00000598256 A2ML1A8K2U0 1454 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms