RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 PRG4Q92954 1404 aaPredicted RBP16.67■□□□□ 0.26
ZNF558-205ENST00000597304 DDRGK1Q96HY6 314 aa16.66■□□□□ 0.26
ZNF558-205ENST00000597304 PARD3Q8TEW0 1356 aa16.66■□□□□ 0.26
ZNF558-205ENST00000597304 ADCY10Q96PN6 1610 aa16.66■□□□□ 0.26
ZNF558-205ENST00000597304 WASHC2CQ9Y4E1 1318 aa16.66■□□□□ 0.26
ZNF558-205ENST00000597304 ZNF777Q9ULD5 760 aaPredicted RBP16.65■□□□□ 0.26
ZNF558-205ENST00000597304 RTN4Q9NQC3 1192 aaKnown RBP16.64■□□□□ 0.25
ZNF558-205ENST00000597304 CEP170Q5SW79 1584 aa16.64■□□□□ 0.25
ZNF558-205ENST00000597304 NUP155O75694 1391 aa16.64■□□□□ 0.25
ZNF558-205ENST00000597304 KDM2AQ9Y2K7 1162 aa16.64■□□□□ 0.25
ZNF558-205ENST00000597304 KDM5DQ9BY66 1539 aa16.62■□□□□ 0.25
ZNF558-205ENST00000597304 CDCA7LQ96GN5 454 aa16.62■□□□□ 0.25
ZNF558-205ENST00000597304 DCAF11Q8TEB1 546 aa16.61■□□□□ 0.25
ZNF558-205ENST00000597304 PLIN1O60240 522 aa16.6■□□□□ 0.25
ZNF558-205ENST00000597304 ZMYM4Q5VZL5 1548 aa16.6■□□□□ 0.25
ZNF558-205ENST00000597304 SHANK2Q9UPX8 1470 aa16.6■□□□□ 0.25
ZNF558-205ENST00000597304 BLMP54132 1417 aaPredicted RBP16.59■□□□□ 0.25
ZNF558-205ENST00000597304 INSRP06213 1382 aa16.59■□□□□ 0.25
ZNF558-205ENST00000597304 CRBNQ96SW2 442 aa16.59■□□□□ 0.25
ZNF558-205ENST00000597304 CDC42BPAQ5VT25 1732 aa16.59■□□□□ 0.25
ZNF558-205ENST00000597304 TRPM1Q7Z4N2 1603 aa16.58■□□□□ 0.24
ZNF558-205ENST00000597304 PLEKHH2Q8IVE3 1493 aa16.58■□□□□ 0.24
ZNF558-205ENST00000597304 C9orf84Q5VXU9 1444 aa16.58■□□□□ 0.24
ZNF558-205ENST00000597304 GSE1Q14687 1217 aa16.55■□□□□ 0.24
ZNF558-205ENST00000597304 PER1O15534 1290 aaPredicted RBP16.55■□□□□ 0.24
ZNF558-205ENST00000597304 SKAP1Q86WV1 359 aa16.55■□□□□ 0.24
ZNF558-205ENST00000597304 PLB1Q6P1J6 1458 aa16.54■□□□□ 0.24
ZNF558-205ENST00000597304 PTPRGP23470 1445 aa16.54■□□□□ 0.24
ZNF558-205ENST00000597304 NFKBIBQ15653 356 aa16.53■□□□□ 0.24
ZNF558-205ENST00000597304 PRAG1Q86YV5 1406 aa16.53■□□□□ 0.24
ZNF558-205ENST00000597304 COL17A1Q9UMD9 1497 aaPredicted RBP16.53■□□□□ 0.24
ZNF558-205ENST00000597304 DAXXQ9UER7 740 aaPredicted RBP16.53■□□□□ 0.24
ZNF558-205ENST00000597304 ZNF608Q9ULD9 1512 aaPredicted RBP16.52■□□□□ 0.24
ZNF558-205ENST00000597304 GRIN2AQ12879 1464 aa16.52■□□□□ 0.23
ZNF558-205ENST00000597304 CC2D1BQ5T0F9 858 aaKnown RBP16.51■□□□□ 0.23
ZNF558-205ENST00000597304 KDM2BQ8NHM5 1336 aa16.51■□□□□ 0.23
ZNF558-205ENST00000597304 MRC2Q9UBG0 1479 aa16.5■□□□□ 0.23
ZNF558-205ENST00000597304 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
ZNF558-205ENST00000597304 LAMC1P11047 1609 aa16.5■□□□□ 0.23
ZNF558-205ENST00000597304 TSPY4P0CV99 314 aa16.49■□□□□ 0.23
ZNF558-205ENST00000597304 TSPY10P0CW01 314 aa16.49■□□□□ 0.23
ZNF558-205ENST00000597304 CENPQQ7L2Z9 268 aaPredicted RBP16.49■□□□□ 0.23
ZNF558-205ENST00000597304 BRPF3Q9ULD4 1205 aa16.49■□□□□ 0.23
ZNF558-205ENST00000597304 C20orf194Q5TEA3 1177 aa16.49■□□□□ 0.23
ZNF558-205ENST00000597304 GPRASP1Q5JY77 1395 aa16.48■□□□□ 0.23
ZNF558-205ENST00000597304 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
ZNF558-205ENST00000597304 FAM135AQ9P2D6 1515 aa16.48■□□□□ 0.23
ZNF558-205ENST00000597304 SLC4A3P48751 1232 aa16.48■□□□□ 0.23
ZNF558-205ENST00000597304 CCDC144AA2RUR9 1427 aa16.48■□□□□ 0.23
ZNF558-205ENST00000597304 PRDM15P57071 1507 aaPredicted RBP16.48■□□□□ 0.23
ZNF558-205ENST00000597304 FAM161AQ3B820 660 aa16.47■□□□□ 0.23
ZNF558-205ENST00000597304 DISP3Q9P2K9 1392 aa16.47■□□□□ 0.23
ZNF558-205ENST00000597304 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.47■□□□□ 0.23
ZNF558-205ENST00000597304 ABCC10Q5T3U5 1492 aa16.46■□□□□ 0.23
ZNF558-205ENST00000597304 FRAT1Q92837 279 aaPredicted RBP16.46■□□□□ 0.23
ZNF558-205ENST00000597304 NBPF1Q3BBV0 1214 aa16.46■□□□□ 0.22
ZNF558-205ENST00000597304 ARHGEF5Q12774 1597 aa16.45■□□□□ 0.22
ZNF558-205ENST00000597304 PANK3Q9H999 370 aa16.45■□□□□ 0.22
ZNF558-205ENST00000597304 ERBINQ96RT1 1412 aa16.44■□□□□ 0.22
ZNF558-205ENST00000597304 C8orf34Q49A92 452 aa16.44■□□□□ 0.22
ZNF558-205ENST00000597304 EIF2AK4Q9P2K8 1649 aaKnown RBP16.43■□□□□ 0.22
ZNF558-205ENST00000597304 PLEKHD1A6NEE1 506 aa16.43■□□□□ 0.22
ZNF558-205ENST00000597304 TESK2Q96S53 571 aa16.43■□□□□ 0.22
ZNF558-205ENST00000597304 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
ZNF558-205ENST00000597304 A2MP01023 1474 aa16.42■□□□□ 0.22
ZNF558-205ENST00000597304 MYO5CQ9NQX4 1742 aa16.42■□□□□ 0.22
ZNF558-205ENST00000597304 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
ZNF558-205ENST00000597304 RGL3Q3MIN7 710 aa16.42■□□□□ 0.22
ZNF558-205ENST00000597304 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.42■□□□□ 0.22
ZNF558-205ENST00000597304 TMF1P82094 1093 aa16.41■□□□□ 0.22
ZNF558-205ENST00000597304 ADAMTS8Q9UP79 889 aa16.41■□□□□ 0.22
ZNF558-205ENST00000597304 CARMIL2Q6F5E8 1435 aa16.41■□□□□ 0.22
ZNF558-205ENST00000597304 DUSP27Q5VZP5 1158 aa16.41■□□□□ 0.22
ZNF558-205ENST00000597304 ABCA8O94911 1581 aa16.4■□□□□ 0.22
ZNF558-205ENST00000597304 PLEKHH1Q9ULM0 1364 aa16.39■□□□□ 0.21
ZNF558-205ENST00000597304 HNRNPMP52272 730 aaKnown RBP eCLIP16.39■□□□□ 0.21
ZNF558-205ENST00000597304 WDR43Q15061 677 aaKnown RBP eCLIP16.39■□□□□ 0.21
ZNF558-205ENST00000597304 CCDC141Q6ZP82 1450 aa16.38■□□□□ 0.21
ZNF558-205ENST00000597304 VIRMAQ69YN4 1812 aaKnown RBP16.37■□□□□ 0.21
ZNF558-205ENST00000597304 CLASP1Q7Z460 1538 aa16.37■□□□□ 0.21
ZNF558-205ENST00000597304 UNC13BO14795 1591 aa16.37■□□□□ 0.21
ZNF558-205ENST00000597304 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
ZNF558-205ENST00000597304 FRAT2O75474 233 aaPredicted RBP16.36■□□□□ 0.21
ZNF558-205ENST00000597304 RGS3P49796 1198 aa16.36■□□□□ 0.21
ZNF558-205ENST00000597304 NUP160Q12769 1436 aa16.36■□□□□ 0.21
ZNF558-205ENST00000597304 ZNF521Q96K83 1311 aa16.36■□□□□ 0.21
ZNF558-205ENST00000597304 SYNJ2O15056 1496 aa16.36■□□□□ 0.21
ZNF558-205ENST00000597304 ATP10BO94823 1461 aa16.36■□□□□ 0.21
ZNF558-205ENST00000597304 PLA2R1Q13018 1463 aa16.36■□□□□ 0.21
ZNF558-205ENST00000597304 RNF17Q9BXT8 1623 aaKnown RBP16.35■□□□□ 0.21
ZNF558-205ENST00000597304 SAMD9LQ8IVG5 1584 aa16.35■□□□□ 0.21
ZNF558-205ENST00000597304 EIF3AQ14152 1382 aaKnown RBP16.34■□□□□ 0.21
ZNF558-205ENST00000597304 PPP2R1AP30153 589 aa16.34■□□□□ 0.21
ZNF558-205ENST00000597304 KNSTRNQ9Y448 316 aa16.33■□□□□ 0.2
ZNF558-205ENST00000597304 CHMP7Q8WUX9 453 aaPredicted RBP16.32■□□□□ 0.2
ZNF558-205ENST00000597304 MAGI2Q86UL8 1455 aa16.32■□□□□ 0.2
ZNF558-205ENST00000597304 WDR7Q9Y4E6 1490 aa16.32■□□□□ 0.2
ZNF558-205ENST00000597304 CDC42BPBQ9Y5S2 1711 aa16.32■□□□□ 0.2
ZNF558-205ENST00000597304 PREX2Q70Z35 1606 aa16.31■□□□□ 0.2
ZNF558-205ENST00000597304 IQGAP3Q86VI3 1631 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms