RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 GCC2Q8IWJ2 1684 aa22.3■■□□□ 1.16
ARHGEF1-214ENST00000596957 TRIM52Q96A61 297 aa22.29■■□□□ 1.16
ARHGEF1-214ENST00000596957 WASHC2CQ9Y4E1 1318 aa22.28■■□□□ 1.16
ARHGEF1-214ENST00000596957 PPP6R1Q9UPN7 881 aa22.26■■□□□ 1.15
ARHGEF1-214ENST00000596957 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
ARHGEF1-214ENST00000596957 BCORL1Q5H9F3 1711 aa22.24■■□□□ 1.15
ARHGEF1-214ENST00000596957 RNF17Q9BXT8 1623 aaKnown RBP22.23■■□□□ 1.15
ARHGEF1-214ENST00000596957 NUP155O75694 1391 aa22.23■■□□□ 1.15
ARHGEF1-214ENST00000596957 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
ARHGEF1-214ENST00000596957 ACIN1Q9UKV3 1341 aaKnown RBP22.21■■□□□ 1.15
ARHGEF1-214ENST00000596957 CNTLNQ9NXG0 1405 aa22.2■■□□□ 1.14
ARHGEF1-214ENST00000596957 PRDM15P57071 1507 aaPredicted RBP22.2■■□□□ 1.14
ARHGEF1-214ENST00000596957 KDM5DQ9BY66 1539 aa22.2■■□□□ 1.14
ARHGEF1-214ENST00000596957 DEPDC5O75140 1603 aa22.17■■□□□ 1.14
ARHGEF1-214ENST00000596957 MROH1Q8NDA8 1641 aa22.17■■□□□ 1.14
ARHGEF1-214ENST00000596957 MADDQ8WXG6 1647 aa22.17■■□□□ 1.14
ARHGEF1-214ENST00000596957 UNC13BO14795 1591 aa22.17■■□□□ 1.14
ARHGEF1-214ENST00000596957 KDM4FA0A1W2PPD8 638 aa22.17■■□□□ 1.14
ARHGEF1-214ENST00000596957 ADAMTSL3P82987 1691 aa22.15■■□□□ 1.14
ARHGEF1-214ENST00000596957 ABCC3O15438 1527 aa22.15■■□□□ 1.14
ARHGEF1-214ENST00000596957 FAM135AQ9P2D6 1515 aa22.15■■□□□ 1.14
ARHGEF1-214ENST00000596957 HRCP23327 699 aa22.14■■□□□ 1.13
ARHGEF1-214ENST00000596957 FER1L4A9Z1Z3 1794 aa22.14■■□□□ 1.13
ARHGEF1-214ENST00000596957 SLC4A1APQ9BWU0 796 aaKnown RBP22.13■■□□□ 1.13
ARHGEF1-214ENST00000596957 CLTCQ00610 1675 aaKnown RBP22.12■■□□□ 1.13
ARHGEF1-214ENST00000596957 ZMYM3Q14202 1370 aa22.12■■□□□ 1.13
ARHGEF1-214ENST00000596957 RIMS1Q86UR5 1692 aaKnown RBP22.11■■□□□ 1.13
ARHGEF1-214ENST00000596957 ZC3H13Q5T200 1668 aaKnown RBP22.11■■□□□ 1.13
ARHGEF1-214ENST00000596957 CEBPAP49715 358 aaPredicted RBP22.1■■□□□ 1.13
ARHGEF1-214ENST00000596957 VWDEQ8N2E2 1590 aa22.09■■□□□ 1.13
ARHGEF1-214ENST00000596957 PTPRMP28827 1452 aa22.09■■□□□ 1.13
ARHGEF1-214ENST00000596957 LMTK2Q8IWU2 1503 aa22.08■■□□□ 1.13
ARHGEF1-214ENST00000596957 IQGAP3Q86VI3 1631 aa22.08■■□□□ 1.13
ARHGEF1-214ENST00000596957 CEP152O94986 1710 aa22.07■■□□□ 1.12
ARHGEF1-214ENST00000596957 MPHOSPH9Q99550 1183 aa22.07■■□□□ 1.12
ARHGEF1-214ENST00000596957 PZPP20742 1482 aa22.05■■□□□ 1.12
ARHGEF1-214ENST00000596957 PKD2Q13563 968 aa22.05■■□□□ 1.12
ARHGEF1-214ENST00000596957 CAMSAP1Q5T5Y3 1602 aa22.05■■□□□ 1.12
ARHGEF1-214ENST00000596957 EFCAB6Q5THR3 1501 aa22.04■■□□□ 1.12
ARHGEF1-214ENST00000596957 MROH2AA6NES4 1674 aa22.04■■□□□ 1.12
ARHGEF1-214ENST00000596957 TET3O43151 1660 aa22.02■■□□□ 1.12
ARHGEF1-214ENST00000596957 FBXO31Q5XUX0 539 aaPredicted RBP22.02■■□□□ 1.12
ARHGEF1-214ENST00000596957 NPATQ14207 1427 aa22.02■■□□□ 1.12
ARHGEF1-214ENST00000596957 ARHGAP31Q2M1Z3 1444 aa22.02■■□□□ 1.12
ARHGEF1-214ENST00000596957 RPRD2Q5VT52 1461 aaKnown RBP21.99■■□□□ 1.11
ARHGEF1-214ENST00000596957 FOXD1Q16676 465 aa21.98■■□□□ 1.11
ARHGEF1-214ENST00000596957 C3P01024 1663 aa21.98■■□□□ 1.11
ARHGEF1-214ENST00000596957 AEBP2Q6ZN18 517 aaPredicted RBP21.97■■□□□ 1.11
ARHGEF1-214ENST00000596957 TNRQ92752 1358 aa21.97■■□□□ 1.11
ARHGEF1-214ENST00000596957 ERVK-7P63135 1459 aa21.96■■□□□ 1.11
ARHGEF1-214ENST00000596957 E9PCH4 1651 aa21.93■■□□□ 1.1
ARHGEF1-214ENST00000596957 SPATA31D1Q6ZQQ2 1576 aa21.9■■□□□ 1.1
ARHGEF1-214ENST00000596957 NOS1P29475 1434 aa21.89■■□□□ 1.1
ARHGEF1-214ENST00000596957 DHX57Q6P158 1386 aaKnown RBP21.89■■□□□ 1.1
ARHGEF1-214ENST00000596957 PREX1Q8TCU6 1659 aa21.89■■□□□ 1.1
ARHGEF1-214ENST00000596957 STAG3Q9UJ98 1225 aa21.88■■□□□ 1.09
ARHGEF1-214ENST00000596957 UHRF1BP1Q6BDS2 1440 aa21.88■■□□□ 1.09
ARHGEF1-214ENST00000596957 SLC52A1Q9NWF4 448 aa21.87■■□□□ 1.09
ARHGEF1-214ENST00000596957 PTPRTO14522 1441 aa21.87■■□□□ 1.09
ARHGEF1-214ENST00000596957 CHGAP10645 457 aaKnown RBP21.86■■□□□ 1.09
ARHGEF1-214ENST00000596957 NLRP1Q9C000 1473 aa21.84■■□□□ 1.09
ARHGEF1-214ENST00000596957 CCDC144AA2RUR9 1427 aa21.84■■□□□ 1.09
ARHGEF1-214ENST00000596957 SYNMO15061 1565 aa21.83■■□□□ 1.09
ARHGEF1-214ENST00000596957 IDI1Q13907 227 aa21.83■■□□□ 1.09
ARHGEF1-214ENST00000596957 CCER1Q8TC90 406 aaPredicted RBP21.83■■□□□ 1.09
ARHGEF1-214ENST00000596957 TRPM2O94759 1503 aa21.83■■□□□ 1.09
ARHGEF1-214ENST00000596957 SPHKAPQ2M3C7 1700 aa21.82■■□□□ 1.08
ARHGEF1-214ENST00000596957 PLA2R1Q13018 1463 aa21.82■■□□□ 1.08
ARHGEF1-214ENST00000596957 UGGT1Q9NYU2 1555 aa21.81■■□□□ 1.08
ARHGEF1-214ENST00000596957 MYO3AQ8NEV4 1616 aa21.8■■□□□ 1.08
ARHGEF1-214ENST00000596957 CFAP65Q6ZU64 1925 aaKnown RBP21.8■■□□□ 1.08
ARHGEF1-214ENST00000596957 ANKRD30BQ9BXX2 1392 aa21.8■■□□□ 1.08
ARHGEF1-214ENST00000596957 A2ML1A8K2U0 1454 aa21.79■■□□□ 1.08
ARHGEF1-214ENST00000596957 CEP170BQ9Y4F5 1589 aaPredicted RBP21.77■■□□□ 1.08
ARHGEF1-214ENST00000596957 ZNF326Q5BKZ1 582 aaKnown RBP21.76■■□□□ 1.07
ARHGEF1-214ENST00000596957 THEMISQ8N1K5 641 aaPredicted RBP21.76■■□□□ 1.07
ARHGEF1-214ENST00000596957 CLTCL1P53675 1640 aa21.75■■□□□ 1.07
ARHGEF1-214ENST00000596957 NEUROD1Q13562 356 aa21.74■■□□□ 1.07
ARHGEF1-214ENST00000596957 PIK3C2BO00750 1634 aa21.73■■□□□ 1.07
ARHGEF1-214ENST00000596957 ADGRB3O60242 1522 aa21.72■■□□□ 1.07
ARHGEF1-214ENST00000596957 HSPA2P54652 639 aa21.72■■□□□ 1.07
ARHGEF1-214ENST00000596957 LMTK3Q96Q04 1460 aa21.71■■□□□ 1.07
ARHGEF1-214ENST00000596957 SETD1BQ9UPS6 1966 aaKnown RBP21.71■■□□□ 1.07
ARHGEF1-214ENST00000596957 RGL3Q3MIN7 710 aa21.71■■□□□ 1.07
ARHGEF1-214ENST00000596957 SIN3AQ96ST3 1273 aa21.71■■□□□ 1.07
ARHGEF1-214ENST00000596957 ZNF142P52746 1687 aaPredicted RBP21.69■■□□□ 1.06
ARHGEF1-214ENST00000596957 PPP1R15AO75807 674 aaPredicted RBP21.67■■□□□ 1.06
ARHGEF1-214ENST00000596957 HDGFP51858 240 aaKnown RBP21.67■■□□□ 1.06
ARHGEF1-214ENST00000596957 EID1Q9Y6B2 187 aa21.67■■□□□ 1.06
ARHGEF1-214ENST00000596957 CLSPNQ9HAW4 1339 aa21.66■■□□□ 1.06
ARHGEF1-214ENST00000596957 TMEM2Q9UHN6 1383 aa21.65■■□□□ 1.06
ARHGEF1-214ENST00000596957 UBR1Q8IWV7 1749 aa21.65■■□□□ 1.06
ARHGEF1-214ENST00000596957 TMEM131LA2VDJ0 1609 aa21.65■■□□□ 1.06
ARHGEF1-214ENST00000596957 ANKLE2Q86XL3 938 aa21.64■■□□□ 1.05
ARHGEF1-214ENST00000596957 TXNDC2Q86VQ3 553 aa21.63■■□□□ 1.05
ARHGEF1-214ENST00000596957 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.63■■□□□ 1.05
ARHGEF1-214ENST00000596957 RIMS2Q9UQ26 1411 aa21.63■■□□□ 1.05
ARHGEF1-214ENST00000596957 KIF1BO60333 1816 aa21.62■■□□□ 1.05
ARHGEF1-214ENST00000596957 NUTM2DQ5VT03 806 aaPredicted RBP21.62■■□□□ 1.05
ARHGEF1-214ENST00000596957 BCANQ96GW7 911 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms