RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 CCDC144AA2RUR9 1427 aa31.3■■■□□ 2.6
SRRM1-222ENST00000596378 FAM9BQ8IZU0 186 aa31.3■■■□□ 2.6
SRRM1-222ENST00000596378 PLA2R1Q13018 1463 aa31.29■■■□□ 2.6
SRRM1-222ENST00000596378 NEFLP07196 543 aa31.29■■■□□ 2.6
SRRM1-222ENST00000596378 EFCAB2Q5VUJ9 269 aa31.29■■■□□ 2.6
SRRM1-222ENST00000596378 DHX29Q7Z478 1369 aaKnown RBP31.28■■■□□ 2.6
SRRM1-222ENST00000596378 ABCC1P33527 1531 aa31.27■■■□□ 2.6
SRRM1-222ENST00000596378 DUOX2Q9NRD8 1548 aa31.27■■■□□ 2.6
SRRM1-222ENST00000596378 IQGAP3Q86VI3 1631 aa31.27■■■□□ 2.6
SRRM1-222ENST00000596378 TRAPPC8Q9Y2L5 1435 aa31.27■■■□□ 2.6
SRRM1-222ENST00000596378 RGL3Q3MIN7 710 aa31.25■■■□□ 2.59
SRRM1-222ENST00000596378 ST20-MTHFSA0A0A6YYL1 179 aa31.23■■■□□ 2.59
SRRM1-222ENST00000596378 ROCK2O75116 1388 aaKnown RBP31.21■■■□□ 2.59
SRRM1-222ENST00000596378 ERBINQ96RT1 1412 aa31.2■■■□□ 2.58
SRRM1-222ENST00000596378 PRAG1Q86YV5 1406 aa31.18■■■□□ 2.58
SRRM1-222ENST00000596378 ARID4BQ4LE39 1312 aaPredicted RBP31.18■■■□□ 2.58
SRRM1-222ENST00000596378 MAGI2Q86UL8 1455 aa31.18■■■□□ 2.58
SRRM1-222ENST00000596378 TRPM1Q7Z4N2 1603 aa31.17■■■□□ 2.58
SRRM1-222ENST00000596378 A2MP01023 1474 aa31.16■■■□□ 2.58
SRRM1-222ENST00000596378 AFAP1Q8N556 730 aa31.15■■■□□ 2.58
SRRM1-222ENST00000596378 NBPF1Q3BBV0 1214 aa31.12■■■□□ 2.57
SRRM1-222ENST00000596378 SPAG9O60271 1321 aaKnown RBP31.11■■■□□ 2.57
SRRM1-222ENST00000596378 WDR7Q9Y4E6 1490 aa31.1■■■□□ 2.57
SRRM1-222ENST00000596378 TSHZ2Q9NRE2 1034 aa31.09■■■□□ 2.57
SRRM1-222ENST00000596378 ZFYVE16Q7Z3T8 1539 aa31.08■■■□□ 2.57
SRRM1-222ENST00000596378 IRX6P78412 446 aaPredicted RBP31.06■■■□□ 2.56
SRRM1-222ENST00000596378 ARAP3Q8WWN8 1544 aa31.06■■■□□ 2.56
SRRM1-222ENST00000596378 ATP10AO60312 1499 aa31.04■■■□□ 2.56
SRRM1-222ENST00000596378 ZBED9Q6R2W3 1325 aa31.03■■■□□ 2.56
SRRM1-222ENST00000596378 FANCAO15360 1455 aa31.01■■■□□ 2.55
SRRM1-222ENST00000596378 E9PCH4 1651 aa31■■■□□ 2.55
SRRM1-222ENST00000596378 ABCA9Q8IUA7 1624 aa31■■■□□ 2.55
SRRM1-222ENST00000596378 RTEL1-TNFRSF6BF6WH68 1400 aa31■■■□□ 2.55
SRRM1-222ENST00000596378 GPRASP1Q5JY77 1395 aa30.98■■■□□ 2.55
SRRM1-222ENST00000596378 PRDM15P57071 1507 aaPredicted RBP30.95■■■□□ 2.54
SRRM1-222ENST00000596378 ATP7AQ04656 1500 aa30.94■■■□□ 2.54
SRRM1-222ENST00000596378 ASXL2Q76L83 1435 aa30.93■■■□□ 2.54
SRRM1-222ENST00000596378 INO80Q9ULG1 1556 aaPredicted RBP30.93■■■□□ 2.54
SRRM1-222ENST00000596378 EIF2AK4Q9P2K8 1649 aaKnown RBP30.93■■■□□ 2.54
SRRM1-222ENST00000596378 LAMC1P11047 1609 aa30.92■■■□□ 2.54
SRRM1-222ENST00000596378 MYT1LQ9UL68 1186 aa30.92■■■□□ 2.54
SRRM1-222ENST00000596378 SENP3-EIF4A1A0A087X0R7 540 aa30.91■■■□□ 2.54
SRRM1-222ENST00000596378 ADGRL1O94910 1474 aa30.91■■■□□ 2.54
SRRM1-222ENST00000596378 DEPDC5O75140 1603 aa30.9■■■□□ 2.54
SRRM1-222ENST00000596378 SCAPERQ9BY12 1400 aa30.9■■■□□ 2.54
SRRM1-222ENST00000596378 DISP3Q9P2K9 1392 aa30.88■■■□□ 2.53
SRRM1-222ENST00000596378 TMC1Q8TDI8 760 aa30.88■■■□□ 2.53
SRRM1-222ENST00000596378 TESK2Q96S53 571 aa30.87■■■□□ 2.53
SRRM1-222ENST00000596378 SPHKAPQ2M3C7 1700 aa30.87■■■□□ 2.53
SRRM1-222ENST00000596378 TRPM2O94759 1503 aa30.87■■■□□ 2.53
SRRM1-222ENST00000596378 PNISRQ8TF01 805 aaKnown RBP30.86■■■□□ 2.53
SRRM1-222ENST00000596378 COL17A1Q9UMD9 1497 aaPredicted RBP30.86■■■□□ 2.53
SRRM1-222ENST00000596378 KIF3BO15066 747 aa30.84■■■□□ 2.53
SRRM1-222ENST00000596378 CLTCL1P53675 1640 aa30.84■■■□□ 2.53
SRRM1-222ENST00000596378 RNF17Q9BXT8 1623 aaKnown RBP30.83■■■□□ 2.53
SRRM1-222ENST00000596378 TET3O43151 1660 aa30.82■■■□□ 2.52
SRRM1-222ENST00000596378 MYBBP1AQ9BQG0 1328 aaKnown RBP30.82■■■□□ 2.52
SRRM1-222ENST00000596378 CEP152O94986 1710 aa30.82■■■□□ 2.52
SRRM1-222ENST00000596378 MADDQ8WXG6 1647 aa30.82■■■□□ 2.52
SRRM1-222ENST00000596378 PTPRTO14522 1441 aa30.8■■■□□ 2.52
SRRM1-222ENST00000596378 RALBP1Q15311 655 aa30.8■■■□□ 2.52
SRRM1-222ENST00000596378 VWDEQ8N2E2 1590 aa30.78■■■□□ 2.52
SRRM1-222ENST00000596378 KANK1Q14678 1352 aa30.77■■■□□ 2.52
SRRM1-222ENST00000596378 BRD4O60885 1362 aaPredicted RBP30.76■■■□□ 2.51
SRRM1-222ENST00000596378 KTN1Q86UP2 1357 aaKnown RBP30.76■■■□□ 2.51
SRRM1-222ENST00000596378 PER1O15534 1290 aaPredicted RBP30.76■■■□□ 2.51
SRRM1-222ENST00000596378 MROH1Q8NDA8 1641 aa30.76■■■□□ 2.51
SRRM1-222ENST00000596378 OSCARQ8IYS5 282 aa30.74■■■□□ 2.51
SRRM1-222ENST00000596378 KIDINS220Q9ULH0 1771 aa30.73■■■□□ 2.51
SRRM1-222ENST00000596378 PARD3Q8TEW0 1356 aa30.73■■■□□ 2.51
SRRM1-222ENST00000596378 TMF1P82094 1093 aa30.72■■■□□ 2.51
SRRM1-222ENST00000596378 SMG6Q86US8 1419 aaKnown RBP30.72■■■□□ 2.51
SRRM1-222ENST00000596378 LRPPRCP42704 1394 aaKnown RBP30.71■■■□□ 2.51
SRRM1-222ENST00000596378 PANK3Q9H999 370 aa30.7■■■□□ 2.51
SRRM1-222ENST00000596378 UGGT1Q9NYU2 1555 aa30.7■■■□□ 2.51
SRRM1-222ENST00000596378 NPM1P06748 294 aaKnown RBP eCLIP30.7■■■□□ 2.5
SRRM1-222ENST00000596378 IQGAP1P46940 1657 aa30.69■■■□□ 2.5
SRRM1-222ENST00000596378 CC2D1BQ5T0F9 858 aaKnown RBP30.69■■■□□ 2.5
SRRM1-222ENST00000596378 NUDCQ9Y266 331 aa30.67■■■□□ 2.5
SRRM1-222ENST00000596378 NLRP13Q86W25 1043 aa30.65■■■□□ 2.5
SRRM1-222ENST00000596378 ERICH6BQ5W0A0 696 aa30.65■■■□□ 2.5
SRRM1-222ENST00000596378 ZNF518AQ6AHZ1 1483 aa30.64■■■□□ 2.5
SRRM1-222ENST00000596378 PPP4R2Q9NY27 417 aa30.64■■■□□ 2.5
SRRM1-222ENST00000596378 CD109Q6YHK3 1445 aa30.61■■■□□ 2.49
SRRM1-222ENST00000596378 EFCAB6Q5THR3 1501 aa30.61■■■□□ 2.49
SRRM1-222ENST00000596378 PPRC1Q5VV67 1664 aaKnown RBP30.6■■■□□ 2.49
SRRM1-222ENST00000596378 SCAF11Q99590 1463 aaKnown RBP30.59■■■□□ 2.49
SRRM1-222ENST00000596378 RBM19Q9Y4C8 960 aaKnown RBP30.57■■■□□ 2.48
SRRM1-222ENST00000596378 B4GALNT3Q6L9W6 998 aa30.56■■■□□ 2.48
SRRM1-222ENST00000596378 STAC3Q96MF2 364 aa30.55■■■□□ 2.48
SRRM1-222ENST00000596378 SALL2Q9Y467 1007 aaPredicted RBP30.55■■■□□ 2.48
SRRM1-222ENST00000596378 POGZQ7Z3K3 1410 aa30.55■■■□□ 2.48
SRRM1-222ENST00000596378 WASHC2CQ9Y4E1 1318 aa30.55■■■□□ 2.48
SRRM1-222ENST00000596378 KIF1BO60333 1816 aa30.54■■■□□ 2.48
SRRM1-222ENST00000596378 MROH2AA6NES4 1674 aa30.54■■■□□ 2.48
SRRM1-222ENST00000596378 ADGRF5Q8IZF2 1346 aa30.53■■■□□ 2.48
SRRM1-222ENST00000596378 CFAP70Q5T0N1 1121 aa30.52■■■□□ 2.48
SRRM1-222ENST00000596378 FRMPD1Q5SYB0 1578 aa30.51■■■□□ 2.47
SRRM1-222ENST00000596378 CFAP74Q9C0B2 1584 aa30.51■■■□□ 2.47
SRRM1-222ENST00000596378 ABCA6Q8N139 1617 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms