RNA–Protein interactions for RNA: ENST00000595652.5

SCN1B-203, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 2 BASIC

Gene SCN1B, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-203ENST00000595652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.64■■■□□ 2.66
SCN1B-203ENST00000595652 RAB3GAP2Q9H2M9 1393 aa31.63■■■□□ 2.65
SCN1B-203ENST00000595652 DEPDC5O75140 1603 aa31.62■■■□□ 2.65
SCN1B-203ENST00000595652 MROH1Q8NDA8 1641 aa31.62■■■□□ 2.65
SCN1B-203ENST00000595652 UNC13BO14795 1591 aa31.6■■■□□ 2.65
SCN1B-203ENST00000595652 FER1L4A9Z1Z3 1794 aa31.56■■■□□ 2.64
SCN1B-203ENST00000595652 PRDM15P57071 1507 aaPredicted RBP31.56■■■□□ 2.64
SCN1B-203ENST00000595652 CEP152O94986 1710 aa31.55■■■□□ 2.64
SCN1B-203ENST00000595652 TRIM52Q96A61 297 aa31.55■■■□□ 2.64
SCN1B-203ENST00000595652 ADAMTSL3P82987 1691 aa31.54■■■□□ 2.64
SCN1B-203ENST00000595652 CLTCQ00610 1675 aaKnown RBP31.53■■■□□ 2.64
SCN1B-203ENST00000595652 KANK1Q14678 1352 aa31.53■■■□□ 2.64
SCN1B-203ENST00000595652 MADDQ8WXG6 1647 aa31.53■■■□□ 2.64
SCN1B-203ENST00000595652 NUP155O75694 1391 aa31.51■■■□□ 2.63
SCN1B-203ENST00000595652 ESF1Q9H501 851 aaKnown RBP31.5■■■□□ 2.63
SCN1B-203ENST00000595652 WASHC2CQ9Y4E1 1318 aa31.49■■■□□ 2.63
SCN1B-203ENST00000595652 RIMS1Q86UR5 1692 aaKnown RBP31.49■■■□□ 2.63
SCN1B-203ENST00000595652 KDM5DQ9BY66 1539 aa31.49■■■□□ 2.63
SCN1B-203ENST00000595652 ABCC3O15438 1527 aa31.48■■■□□ 2.63
SCN1B-203ENST00000595652 VWDEQ8N2E2 1590 aa31.47■■■□□ 2.63
SCN1B-203ENST00000595652 IQGAP3Q86VI3 1631 aa31.47■■■□□ 2.63
SCN1B-203ENST00000595652 ZC3H13Q5T200 1668 aaKnown RBP31.47■■■□□ 2.63
SCN1B-203ENST00000595652 PPP6R1Q9UPN7 881 aa31.45■■■□□ 2.63
SCN1B-203ENST00000595652 FAM135AQ9P2D6 1515 aa31.43■■■□□ 2.62
SCN1B-203ENST00000595652 HRCP23327 699 aa31.42■■■□□ 2.62
SCN1B-203ENST00000595652 CAMSAP1Q5T5Y3 1602 aa31.42■■■□□ 2.62
SCN1B-203ENST00000595652 CNTLNQ9NXG0 1405 aa31.4■■■□□ 2.62
SCN1B-203ENST00000595652 PZPP20742 1482 aa31.4■■■□□ 2.62
SCN1B-203ENST00000595652 KDM4FA0A1W2PPD8 638 aa31.39■■■□□ 2.62
SCN1B-203ENST00000595652 PLPPR3Q6T4P5 718 aa31.39■■■□□ 2.62
SCN1B-203ENST00000595652 MROH2AA6NES4 1674 aa31.38■■■□□ 2.61
SCN1B-203ENST00000595652 TET3O43151 1660 aa31.38■■■□□ 2.61
SCN1B-203ENST00000595652 LMTK2Q8IWU2 1503 aa31.38■■■□□ 2.61
SCN1B-203ENST00000595652 CFAP65Q6ZU64 1925 aaKnown RBP31.36■■■□□ 2.61
SCN1B-203ENST00000595652 ACIN1Q9UKV3 1341 aaKnown RBP31.36■■■□□ 2.61
SCN1B-203ENST00000595652 SLC4A1APQ9BWU0 796 aaKnown RBP31.34■■■□□ 2.61
SCN1B-203ENST00000595652 C3P01024 1663 aa31.34■■■□□ 2.61
SCN1B-203ENST00000595652 EFCAB6Q5THR3 1501 aa31.34■■■□□ 2.61
SCN1B-203ENST00000595652 ZMYM3Q14202 1370 aa31.33■■■□□ 2.61
SCN1B-203ENST00000595652 E9PCH4 1651 aa31.32■■■□□ 2.6
SCN1B-203ENST00000595652 CEBPAP49715 358 aaPredicted RBP31.31■■■□□ 2.6
SCN1B-203ENST00000595652 MPHOSPH9Q99550 1183 aa31.31■■■□□ 2.6
SCN1B-203ENST00000595652 PTPRMP28827 1452 aa31.28■■■□□ 2.6
SCN1B-203ENST00000595652 PKD2Q13563 968 aa31.27■■■□□ 2.6
SCN1B-203ENST00000595652 NPATQ14207 1427 aa31.26■■■□□ 2.6
SCN1B-203ENST00000595652 FOXD1Q16676 465 aa31.24■■■□□ 2.59
SCN1B-203ENST00000595652 ARHGAP31Q2M1Z3 1444 aa31.24■■■□□ 2.59
SCN1B-203ENST00000595652 PREX1Q8TCU6 1659 aa31.22■■■□□ 2.59
SCN1B-203ENST00000595652 FBXO31Q5XUX0 539 aaPredicted RBP31.22■■■□□ 2.59
SCN1B-203ENST00000595652 RPRD2Q5VT52 1461 aaKnown RBP31.18■■■□□ 2.58
SCN1B-203ENST00000595652 ERVK-7P63135 1459 aa31.17■■■□□ 2.58
SCN1B-203ENST00000595652 DHX57Q6P158 1386 aaKnown RBP31.17■■■□□ 2.58
SCN1B-203ENST00000595652 SPHKAPQ2M3C7 1700 aa31.16■■■□□ 2.58
SCN1B-203ENST00000595652 SPATA31D1Q6ZQQ2 1576 aa31.13■■■□□ 2.57
SCN1B-203ENST00000595652 SYNMO15061 1565 aa31.1■■■□□ 2.57
SCN1B-203ENST00000595652 NOS1P29475 1434 aa31.1■■■□□ 2.57
SCN1B-203ENST00000595652 TNRQ92752 1358 aa31.1■■■□□ 2.57
SCN1B-203ENST00000595652 PLA2R1Q13018 1463 aa31.06■■■□□ 2.56
SCN1B-203ENST00000595652 PTPRTO14522 1441 aa31.06■■■□□ 2.56
SCN1B-203ENST00000595652 UGGT1Q9NYU2 1555 aa31.05■■■□□ 2.56
SCN1B-203ENST00000595652 TRPM2O94759 1503 aa31.04■■■□□ 2.56
SCN1B-203ENST00000595652 SETD1BQ9UPS6 1966 aaKnown RBP31.03■■■□□ 2.56
SCN1B-203ENST00000595652 MYO3AQ8NEV4 1616 aa31.02■■■□□ 2.56
SCN1B-203ENST00000595652 CLTCL1P53675 1640 aa31.01■■■□□ 2.55
SCN1B-203ENST00000595652 ANKRD30BQ9BXX2 1392 aa31■■■□□ 2.55
SCN1B-203ENST00000595652 PIK3C2BO00750 1634 aa30.98■■■□□ 2.55
SCN1B-203ENST00000595652 IDI1Q13907 227 aa30.96■■■□□ 2.55
SCN1B-203ENST00000595652 CCER1Q8TC90 406 aaPredicted RBP30.96■■■□□ 2.55
SCN1B-203ENST00000595652 CCDC144AA2RUR9 1427 aa30.94■■■□□ 2.54
SCN1B-203ENST00000595652 SLC52A1Q9NWF4 448 aa30.94■■■□□ 2.54
SCN1B-203ENST00000595652 NLRP1Q9C000 1473 aa30.94■■■□□ 2.54
SCN1B-203ENST00000595652 UHRF1BP1Q6BDS2 1440 aa30.92■■■□□ 2.54
SCN1B-203ENST00000595652 KIF1BO60333 1816 aa30.92■■■□□ 2.54
SCN1B-203ENST00000595652 CHGAP10645 457 aaKnown RBP30.92■■■□□ 2.54
SCN1B-203ENST00000595652 CEP170BQ9Y4F5 1589 aaPredicted RBP30.91■■■□□ 2.54
SCN1B-203ENST00000595652 MYO5BQ9ULV0 1848 aa30.91■■■□□ 2.54
SCN1B-203ENST00000595652 ZNF142P52746 1687 aaPredicted RBP30.9■■■□□ 2.54
SCN1B-203ENST00000595652 A2ML1A8K2U0 1454 aa30.89■■■□□ 2.54
SCN1B-203ENST00000595652 AEBP2Q6ZN18 517 aaPredicted RBP30.88■■■□□ 2.53
SCN1B-203ENST00000595652 STAG3Q9UJ98 1225 aa30.88■■■□□ 2.53
SCN1B-203ENST00000595652 UBR1Q8IWV7 1749 aa30.87■■■□□ 2.53
SCN1B-203ENST00000595652 SIN3AQ96ST3 1273 aa30.87■■■□□ 2.53
SCN1B-203ENST00000595652 ADGRB3O60242 1522 aa30.87■■■□□ 2.53
SCN1B-203ENST00000595652 TMEM131LA2VDJ0 1609 aa30.84■■■□□ 2.53
SCN1B-203ENST00000595652 NEUROD1Q13562 356 aa30.84■■■□□ 2.53
SCN1B-203ENST00000595652 KDM5AP29375 1690 aaKnown RBP30.79■■■□□ 2.52
SCN1B-203ENST00000595652 LMTK3Q96Q04 1460 aa30.79■■■□□ 2.52
SCN1B-203ENST00000595652 RGL3Q3MIN7 710 aa30.76■■■□□ 2.51
SCN1B-203ENST00000595652 ZNF326Q5BKZ1 582 aaKnown RBP30.76■■■□□ 2.51
SCN1B-203ENST00000595652 SPATA31E1Q6ZUB1 1445 aa30.74■■■□□ 2.51
SCN1B-203ENST00000595652 HSPA2P54652 639 aa30.74■■■□□ 2.51
SCN1B-203ENST00000595652 THEMISQ8N1K5 641 aaPredicted RBP30.74■■■□□ 2.51
SCN1B-203ENST00000595652 CLSPNQ9HAW4 1339 aa30.73■■■□□ 2.51
SCN1B-203ENST00000595652 NEURL4Q96JN8 1562 aa30.67■■■□□ 2.5
SCN1B-203ENST00000595652 TMEM2Q9UHN6 1383 aa30.66■■■□□ 2.5
SCN1B-203ENST00000595652 RIMS2Q9UQ26 1411 aa30.66■■■□□ 2.5
SCN1B-203ENST00000595652 NUTM2DQ5VT03 806 aaPredicted RBP30.66■■■□□ 2.5
SCN1B-203ENST00000595652 PPLO60437 1756 aa30.65■■■□□ 2.5
SCN1B-203ENST00000595652 SLIT1O75093 1534 aa30.64■■■□□ 2.5
SCN1B-203ENST00000595652 NEXMIFQ5QGS0 1516 aa30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms