RNA–Protein interactions for RNA: ENST00000595047.5

GTF2F1-205, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 5

Gene GTF2F1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-205ENST00000595047 TRIM52Q96A61 297 aa27.16■■□□□ 1.94
GTF2F1-205ENST00000595047 HRCP23327 699 aa27.15■■□□□ 1.94
GTF2F1-205ENST00000595047 ACIN1Q9UKV3 1341 aaKnown RBP27.13■■□□□ 1.93
GTF2F1-205ENST00000595047 PPP6R1Q9UPN7 881 aa27.13■■□□□ 1.93
GTF2F1-205ENST00000595047 KANK1Q14678 1352 aa27.13■■□□□ 1.93
GTF2F1-205ENST00000595047 ESF1Q9H501 851 aaKnown RBP27.11■■□□□ 1.93
GTF2F1-205ENST00000595047 NUP155O75694 1391 aa27.11■■□□□ 1.93
GTF2F1-205ENST00000595047 WASHC2CQ9Y4E1 1318 aa27.1■■□□□ 1.93
GTF2F1-205ENST00000595047 BCORL1Q5H9F3 1711 aa27.09■■□□□ 1.93
GTF2F1-205ENST00000595047 RNF17Q9BXT8 1623 aaKnown RBP27.07■■□□□ 1.92
GTF2F1-205ENST00000595047 MROH1Q8NDA8 1641 aa27.04■■□□□ 1.92
GTF2F1-205ENST00000595047 PRDM15P57071 1507 aaPredicted RBP27.03■■□□□ 1.92
GTF2F1-205ENST00000595047 UNC13BO14795 1591 aa27.03■■□□□ 1.92
GTF2F1-205ENST00000595047 DEPDC5O75140 1603 aa27.03■■□□□ 1.92
GTF2F1-205ENST00000595047 SLC4A1APQ9BWU0 796 aaKnown RBP26.99■■□□□ 1.91
GTF2F1-205ENST00000595047 KDM5DQ9BY66 1539 aa26.99■■□□□ 1.91
GTF2F1-205ENST00000595047 CNTLNQ9NXG0 1405 aa26.98■■□□□ 1.91
GTF2F1-205ENST00000595047 MPHOSPH9Q99550 1183 aa26.97■■□□□ 1.91
GTF2F1-205ENST00000595047 ABCC3O15438 1527 aa26.97■■□□□ 1.91
GTF2F1-205ENST00000595047 VWDEQ8N2E2 1590 aa26.97■■□□□ 1.91
GTF2F1-205ENST00000595047 FAM135AQ9P2D6 1515 aa26.96■■□□□ 1.91
GTF2F1-205ENST00000595047 PZPP20742 1482 aa26.94■■□□□ 1.9
GTF2F1-205ENST00000595047 LMTK2Q8IWU2 1503 aa26.93■■□□□ 1.9
GTF2F1-205ENST00000595047 ZMYM3Q14202 1370 aa26.93■■□□□ 1.9
GTF2F1-205ENST00000595047 KDM4FA0A1W2PPD8 638 aa26.93■■□□□ 1.9
GTF2F1-205ENST00000595047 ADAMTSL3P82987 1691 aa26.92■■□□□ 1.9
GTF2F1-205ENST00000595047 IQGAP3Q86VI3 1631 aa26.92■■□□□ 1.9
GTF2F1-205ENST00000595047 PKD2Q13563 968 aa26.92■■□□□ 1.9
GTF2F1-205ENST00000595047 MADDQ8WXG6 1647 aa26.9■■□□□ 1.9
GTF2F1-205ENST00000595047 PLPPR3Q6T4P5 718 aa26.89■■□□□ 1.9
GTF2F1-205ENST00000595047 ZC3H13Q5T200 1668 aaKnown RBP26.88■■□□□ 1.89
GTF2F1-205ENST00000595047 CEBPAP49715 358 aaPredicted RBP26.87■■□□□ 1.89
GTF2F1-205ENST00000595047 CLTCQ00610 1675 aaKnown RBP26.87■■□□□ 1.89
GTF2F1-205ENST00000595047 ARHGAP31Q2M1Z3 1444 aa26.86■■□□□ 1.89
GTF2F1-205ENST00000595047 FER1L4A9Z1Z3 1794 aa26.86■■□□□ 1.89
GTF2F1-205ENST00000595047 CEP152O94986 1710 aa26.85■■□□□ 1.89
GTF2F1-205ENST00000595047 FOXD1Q16676 465 aa26.84■■□□□ 1.89
GTF2F1-205ENST00000595047 NPATQ14207 1427 aa26.84■■□□□ 1.89
GTF2F1-205ENST00000595047 EFCAB6Q5THR3 1501 aa26.83■■□□□ 1.89
GTF2F1-205ENST00000595047 TET3O43151 1660 aa26.83■■□□□ 1.89
GTF2F1-205ENST00000595047 FBXO31Q5XUX0 539 aaPredicted RBP26.83■■□□□ 1.88
GTF2F1-205ENST00000595047 RIMS1Q86UR5 1692 aaKnown RBP26.82■■□□□ 1.88
GTF2F1-205ENST00000595047 CAMSAP1Q5T5Y3 1602 aa26.82■■□□□ 1.88
GTF2F1-205ENST00000595047 PTPRMP28827 1452 aa26.81■■□□□ 1.88
GTF2F1-205ENST00000595047 DHX57Q6P158 1386 aaKnown RBP26.81■■□□□ 1.88
GTF2F1-205ENST00000595047 RPRD2Q5VT52 1461 aaKnown RBP26.8■■□□□ 1.88
GTF2F1-205ENST00000595047 MROH2AA6NES4 1674 aa26.79■■□□□ 1.88
GTF2F1-205ENST00000595047 ERVK-7P63135 1459 aa26.73■■□□□ 1.87
GTF2F1-205ENST00000595047 E9PCH4 1651 aa26.73■■□□□ 1.87
GTF2F1-205ENST00000595047 NOS1P29475 1434 aa26.72■■□□□ 1.87
GTF2F1-205ENST00000595047 C3P01024 1663 aa26.71■■□□□ 1.87
GTF2F1-205ENST00000595047 PTPRTO14522 1441 aa26.71■■□□□ 1.87
GTF2F1-205ENST00000595047 TNRQ92752 1358 aa26.71■■□□□ 1.87
GTF2F1-205ENST00000595047 CCER1Q8TC90 406 aaPredicted RBP26.7■■□□□ 1.86
GTF2F1-205ENST00000595047 ANKRD30BQ9BXX2 1392 aa26.68■■□□□ 1.86
GTF2F1-205ENST00000595047 SPATA31D1Q6ZQQ2 1576 aa26.68■■□□□ 1.86
GTF2F1-205ENST00000595047 PLA2R1Q13018 1463 aa26.68■■□□□ 1.86
GTF2F1-205ENST00000595047 SLC52A1Q9NWF4 448 aa26.66■■□□□ 1.86
GTF2F1-205ENST00000595047 PREX1Q8TCU6 1659 aa26.64■■□□□ 1.85
GTF2F1-205ENST00000595047 IDI1Q13907 227 aa26.63■■□□□ 1.85
GTF2F1-205ENST00000595047 CCDC144AA2RUR9 1427 aa26.62■■□□□ 1.85
GTF2F1-205ENST00000595047 TRPM2O94759 1503 aa26.61■■□□□ 1.85
GTF2F1-205ENST00000595047 SYNMO15061 1565 aa26.6■■□□□ 1.85
GTF2F1-205ENST00000595047 CHGAP10645 457 aaKnown RBP26.58■■□□□ 1.85
GTF2F1-205ENST00000595047 STAG3Q9UJ98 1225 aa26.58■■□□□ 1.84
GTF2F1-205ENST00000595047 SPHKAPQ2M3C7 1700 aa26.57■■□□□ 1.84
GTF2F1-205ENST00000595047 NLRP1Q9C000 1473 aa26.57■■□□□ 1.84
GTF2F1-205ENST00000595047 SIN3AQ96ST3 1273 aa26.57■■□□□ 1.84
GTF2F1-205ENST00000595047 UGGT1Q9NYU2 1555 aa26.57■■□□□ 1.84
GTF2F1-205ENST00000595047 CLSPNQ9HAW4 1339 aa26.56■■□□□ 1.84
GTF2F1-205ENST00000595047 CFAP65Q6ZU64 1925 aaKnown RBP26.56■■□□□ 1.84
GTF2F1-205ENST00000595047 NEUROD1Q13562 356 aa26.55■■□□□ 1.84
GTF2F1-205ENST00000595047 UHRF1BP1Q6BDS2 1440 aa26.54■■□□□ 1.84
GTF2F1-205ENST00000595047 CLTCL1P53675 1640 aa26.51■■□□□ 1.83
GTF2F1-205ENST00000595047 AEBP2Q6ZN18 517 aaPredicted RBP26.5■■□□□ 1.83
GTF2F1-205ENST00000595047 A2ML1A8K2U0 1454 aa26.5■■□□□ 1.83
GTF2F1-205ENST00000595047 PIK3C2BO00750 1634 aa26.48■■□□□ 1.83
GTF2F1-205ENST00000595047 RGL3Q3MIN7 710 aa26.47■■□□□ 1.83
GTF2F1-205ENST00000595047 THEMISQ8N1K5 641 aaPredicted RBP26.47■■□□□ 1.83
GTF2F1-205ENST00000595047 MYO3AQ8NEV4 1616 aa26.47■■□□□ 1.83
GTF2F1-205ENST00000595047 ZNF326Q5BKZ1 582 aaKnown RBP26.46■■□□□ 1.83
GTF2F1-205ENST00000595047 SETD1BQ9UPS6 1966 aaKnown RBP26.44■■□□□ 1.82
GTF2F1-205ENST00000595047 CEP170BQ9Y4F5 1589 aaPredicted RBP26.44■■□□□ 1.82
GTF2F1-205ENST00000595047 ADGRB3O60242 1522 aa26.42■■□□□ 1.82
GTF2F1-205ENST00000595047 SPATA31E1Q6ZUB1 1445 aa26.42■■□□□ 1.82
GTF2F1-205ENST00000595047 TMEM131LA2VDJ0 1609 aa26.38■■□□□ 1.81
GTF2F1-205ENST00000595047 RPGRIP1LQ68CZ1 1315 aa26.37■■□□□ 1.81
GTF2F1-205ENST00000595047 LMTK3Q96Q04 1460 aa26.36■■□□□ 1.81
GTF2F1-205ENST00000595047 TMEM2Q9UHN6 1383 aa26.36■■□□□ 1.81
GTF2F1-205ENST00000595047 HDGFP51858 240 aaKnown RBP26.36■■□□□ 1.81
GTF2F1-205ENST00000595047 HSPA2P54652 639 aa26.36■■□□□ 1.81
GTF2F1-205ENST00000595047 ZNF142P52746 1687 aaPredicted RBP26.36■■□□□ 1.81
GTF2F1-205ENST00000595047 TONSLQ96HA7 1378 aa26.35■■□□□ 1.81
GTF2F1-205ENST00000595047 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.33■■□□□ 1.81
GTF2F1-205ENST00000595047 L3MBTL2Q969R5 705 aa26.33■■□□□ 1.81
GTF2F1-205ENST00000595047 EID1Q9Y6B2 187 aa26.33■■□□□ 1.81
GTF2F1-205ENST00000595047 NEURL4Q96JN8 1562 aa26.33■■□□□ 1.81
GTF2F1-205ENST00000595047 UBR1Q8IWV7 1749 aa26.33■■□□□ 1.81
GTF2F1-205ENST00000595047 KIF1BO60333 1816 aa26.33■■□□□ 1.81
GTF2F1-205ENST00000595047 NUTM2DQ5VT03 806 aaPredicted RBP26.33■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms