RNA–Protein interactions for RNA: ENST00000595047.5

GTF2F1-205, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 5

Gene GTF2F1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-205ENST00000595047 NISCHQ9Y2I1 1504 aa43.03■■■■■ 4.48
GTF2F1-205ENST00000595047 CCDC180Q9P1Z9 1646 aa37.86■■■■□ 3.65
GTF2F1-205ENST00000595047 ABCC9O60706 1549 aa36.68■■■■□ 3.46
GTF2F1-205ENST00000595047 ZCCHC6Q5VYS8 1495 aaKnown RBP35.95■■■■□ 3.35
GTF2F1-205ENST00000595047 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
GTF2F1-205ENST00000595047 DCAF1Q9Y4B6 1507 aa35.58■■■■□ 3.29
GTF2F1-205ENST00000595047 NACADO15069 1562 aa35.56■■■■□ 3.28
GTF2F1-205ENST00000595047 MYO15BQ96JP2 1530 aa35.51■■■■□ 3.28
GTF2F1-205ENST00000595047 RB1CC1Q8TDY2 1594 aa35.45■■■■□ 3.27
GTF2F1-205ENST00000595047 SCRIBQ14160 1630 aa34.71■■■■□ 3.15
GTF2F1-205ENST00000595047 SHROOM4Q9ULL8 1493 aa34.49■■■■□ 3.11
GTF2F1-205ENST00000595047 UNC13AQ9UPW8 1703 aa34.47■■■■□ 3.11
GTF2F1-205ENST00000595047 PABPN1Q86U42 306 aaKnown RBP eCLIP34.46■■■■□ 3.11
GTF2F1-205ENST00000595047 BICRAQ9NZM4 1560 aa34.33■■■■□ 3.09
GTF2F1-205ENST00000595047 CECR2Q9BXF3 1484 aa33.5■■■□□ 2.95
GTF2F1-205ENST00000595047 EIF4G1Q04637 1599 aaKnown RBP33.4■■■□□ 2.94
GTF2F1-205ENST00000595047 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
GTF2F1-205ENST00000595047 SMARCA4P51532 1647 aa33.21■■■□□ 2.91
GTF2F1-205ENST00000595047 MROH2BQ7Z745 1585 aa33.19■■■□□ 2.9
GTF2F1-205ENST00000595047 DNAJC5BQ9UF47 199 aa33.17■■■□□ 2.9
GTF2F1-205ENST00000595047 CC2D2AQ9P2K1 1620 aa33.11■■■□□ 2.89
GTF2F1-205ENST00000595047 RSF1Q96T23 1441 aaPredicted RBP33.05■■■□□ 2.88
GTF2F1-205ENST00000595047 ATAD2BQ9ULI0 1458 aa32.97■■■□□ 2.87
GTF2F1-205ENST00000595047 SMARCA2P51531 1590 aa32.92■■■□□ 2.86
GTF2F1-205ENST00000595047 PEG3Q9GZU2 1588 aa32.86■■■□□ 2.85
GTF2F1-205ENST00000595047 NCAPD3P42695 1498 aa32.85■■■□□ 2.85
GTF2F1-205ENST00000595047 WIZO95785 1651 aa32.8■■■□□ 2.84
GTF2F1-205ENST00000595047 SUPT5HO00267 1087 aaKnown RBP32.8■■■□□ 2.84
GTF2F1-205ENST00000595047 BAZ1BQ9UIG0 1483 aaKnown RBP32.73■■■□□ 2.83
GTF2F1-205ENST00000595047 HMGXB3Q12766 1538 aa32.68■■■□□ 2.82
GTF2F1-205ENST00000595047 TOP2AP11388 1531 aaKnown RBP32.52■■■□□ 2.8
GTF2F1-205ENST00000595047 CCDC88BA6NC98 1476 aa32.19■■■□□ 2.74
GTF2F1-205ENST00000595047 CADPSQ9ULU8 1353 aa31.97■■■□□ 2.71
GTF2F1-205ENST00000595047 NESP48681 1621 aa31.88■■■□□ 2.69
GTF2F1-205ENST00000595047 CFTRP13569 1480 aa31.85■■■□□ 2.69
GTF2F1-205ENST00000595047 LAMC3Q9Y6N6 1575 aa31.83■■■□□ 2.69
GTF2F1-205ENST00000595047 PDS5BQ9NTI5 1447 aa31.69■■■□□ 2.66
GTF2F1-205ENST00000595047 ERCC6Q03468 1493 aa31.58■■■□□ 2.65
GTF2F1-205ENST00000595047 FANCD2Q9BXW9 1451 aa31.58■■■□□ 2.65
GTF2F1-205ENST00000595047 CEP164Q9UPV0 1460 aa31.47■■■□□ 2.63
GTF2F1-205ENST00000595047 PRDM2Q13029 1718 aa31.44■■■□□ 2.62
GTF2F1-205ENST00000595047 KIF21AQ7Z4S6 1674 aa31.39■■■□□ 2.62
GTF2F1-205ENST00000595047 MRC2Q9UBG0 1479 aa31.29■■■□□ 2.6
GTF2F1-205ENST00000595047 URB2Q14146 1524 aaKnown RBP31.2■■■□□ 2.58
GTF2F1-205ENST00000595047 THOC2Q8NI27 1593 aaKnown RBP31.17■■■□□ 2.58
GTF2F1-205ENST00000595047 WRNQ14191 1432 aaPredicted RBP eCLIP31.16■■■□□ 2.58
GTF2F1-205ENST00000595047 ABCC8Q09428 1581 aa31.16■■■□□ 2.58
GTF2F1-205ENST00000595047 WDR62O43379 1518 aa31.12■■■□□ 2.57
GTF2F1-205ENST00000595047 TOPBP1Q92547 1522 aa31.11■■■□□ 2.57
GTF2F1-205ENST00000595047 DNMBPQ6XZF7 1577 aa31.09■■■□□ 2.57
GTF2F1-205ENST00000595047 CUX1P39880 1505 aa31.09■■■□□ 2.57
GTF2F1-205ENST00000595047 SYNJ1O43426 1573 aa30.97■■■□□ 2.55
GTF2F1-205ENST00000595047 CUX2O14529 1486 aa30.97■■■□□ 2.55
GTF2F1-205ENST00000595047 TOP2BQ02880 1626 aa30.94■■■□□ 2.54
GTF2F1-205ENST00000595047 TRIM41Q8WV44 630 aa30.93■■■□□ 2.54
GTF2F1-205ENST00000595047 CHIC1Q5VXU3 224 aa30.92■■■□□ 2.54
GTF2F1-205ENST00000595047 FGD5Q6ZNL6 1462 aa30.91■■■□□ 2.54
GTF2F1-205ENST00000595047 POLA1P09884 1462 aaPredicted RBP30.89■■■□□ 2.54
GTF2F1-205ENST00000595047 BIVM-ERCC5R4GMW8 1640 aa30.88■■■□□ 2.53
GTF2F1-205ENST00000595047 SOGA1O94964 1423 aa30.85■■■□□ 2.53
GTF2F1-205ENST00000595047 IFT140Q96RY7 1462 aa30.8■■■□□ 2.52
GTF2F1-205ENST00000595047 RAD54L2Q9Y4B4 1467 aa30.79■■■□□ 2.52
GTF2F1-205ENST00000595047 TARBP1Q13395 1621 aaKnown RBP30.66■■■□□ 2.5
GTF2F1-205ENST00000595047 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
GTF2F1-205ENST00000595047 TDRD9Q8NDG6 1382 aaKnown RBP30.61■■■□□ 2.49
GTF2F1-205ENST00000595047 ZNF608Q9ULD9 1512 aaPredicted RBP30.6■■■□□ 2.49
GTF2F1-205ENST00000595047 AQRO60306 1485 aaKnown RBP eCLIP30.55■■■□□ 2.485e-6■■■□□ 16.9
GTF2F1-205ENST00000595047 WDR97A6NE52 1622 aa30.48■■■□□ 2.47
GTF2F1-205ENST00000595047 KIF27Q86VH2 1401 aa30.47■■■□□ 2.47
GTF2F1-205ENST00000595047 GAPVD1Q14C86 1478 aa30.45■■■□□ 2.47
GTF2F1-205ENST00000595047 EIF4G3O43432 1585 aaKnown RBP30.42■■■□□ 2.46
GTF2F1-205ENST00000595047 ABCA5Q8WWZ7 1642 aa30.38■■■□□ 2.45
GTF2F1-205ENST00000595047 GRIN2BQ13224 1484 aa30.37■■■□□ 2.45
GTF2F1-205ENST00000595047 RUSC2Q8N2Y8 1516 aa30.36■■■□□ 2.45
GTF2F1-205ENST00000595047 FAM9AQ8IZU1 332 aaPredicted RBP30.3■■■□□ 2.44
GTF2F1-205ENST00000595047 IGF1RP08069 1367 aa30.3■■■□□ 2.44
GTF2F1-205ENST00000595047 EEA1Q15075 1411 aa30.27■■■□□ 2.44
GTF2F1-205ENST00000595047 ERICH3Q5RHP9 1530 aa30.25■■■□□ 2.43
GTF2F1-205ENST00000595047 SNAPC4Q5SXM2 1469 aa30.24■■■□□ 2.43
GTF2F1-205ENST00000595047 CSRNP3Q8WYN3 585 aa30.22■■■□□ 2.43
GTF2F1-205ENST00000595047 MAGI1Q96QZ7 1491 aaPredicted RBP30.2■■■□□ 2.43
GTF2F1-205ENST00000595047 PBRM1Q86U86 1689 aa30.2■■■□□ 2.42
GTF2F1-205ENST00000595047 FBLN2P98095 1184 aa30.15■■■□□ 2.42
GTF2F1-205ENST00000595047 FHAD1B1AJZ9 1412 aa30.14■■■□□ 2.42
GTF2F1-205ENST00000595047 CARMIL1Q5VZK9 1371 aa30.14■■■□□ 2.42
GTF2F1-205ENST00000595047 CHMP7Q8WUX9 453 aaPredicted RBP30.14■■■□□ 2.41
GTF2F1-205ENST00000595047 SYNJ2O15056 1496 aa30.09■■■□□ 2.41
GTF2F1-205ENST00000595047 ADAMTS12P58397 1594 aa30.07■■■□□ 2.4
GTF2F1-205ENST00000595047 CUL7Q14999 1698 aa30.04■■■□□ 2.4
GTF2F1-205ENST00000595047 PRXQ9BXM0 1461 aa30.01■■■□□ 2.39
GTF2F1-205ENST00000595047 RAPGEF2Q9Y4G8 1499 aa29.99■■■□□ 2.39
GTF2F1-205ENST00000595047 GRIN2AQ12879 1464 aa29.96■■■□□ 2.39
GTF2F1-205ENST00000595047 OSCARQ8IYS5 282 aa29.91■■■□□ 2.38
GTF2F1-205ENST00000595047 EHMT2Q96KQ7 1210 aa29.9■■■□□ 2.38
GTF2F1-205ENST00000595047 CHD1O14646 1710 aa29.87■■■□□ 2.37
GTF2F1-205ENST00000595047 KIF21BO75037 1637 aa29.82■■■□□ 2.36
GTF2F1-205ENST00000595047 NUP160Q12769 1436 aa29.8■■■□□ 2.36
GTF2F1-205ENST00000595047 GOLGA3Q08378 1498 aa29.78■■■□□ 2.36
GTF2F1-205ENST00000595047 UBTFP17480 764 aaKnown RBP29.77■■■□□ 2.36
GTF2F1-205ENST00000595047 CEP170Q5SW79 1584 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms