RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 FAM135AQ9P2D6 1515 aa30.37■■■□□ 2.45
PNKP-203ENST00000593946 A2MP01023 1474 aa30.35■■■□□ 2.45
PNKP-203ENST00000593946 DIP2CQ9Y2E4 1556 aa30.35■■■□□ 2.45
PNKP-203ENST00000593946 SIN3AQ96ST3 1273 aa30.33■■■□□ 2.45
PNKP-203ENST00000593946 BCORL1Q5H9F3 1711 aa30.31■■■□□ 2.44
PNKP-203ENST00000593946 ANKRD30BQ9BXX2 1392 aa30.29■■■□□ 2.44
PNKP-203ENST00000593946 FOXD1Q16676 465 aa30.28■■■□□ 2.44
PNKP-203ENST00000593946 MROH1Q8NDA8 1641 aa30.27■■■□□ 2.44
PNKP-203ENST00000593946 RNF17Q9BXT8 1623 aaKnown RBP30.27■■■□□ 2.44
PNKP-203ENST00000593946 PRDM15P57071 1507 aaPredicted RBP30.27■■■□□ 2.44
PNKP-203ENST00000593946 COL17A1Q9UMD9 1497 aaPredicted RBP30.27■■■□□ 2.44
PNKP-203ENST00000593946 PKD2Q13563 968 aa30.26■■■□□ 2.43
PNKP-203ENST00000593946 YEATS2Q9ULM3 1422 aa30.26■■■□□ 2.43
PNKP-203ENST00000593946 VWDEQ8N2E2 1590 aa30.25■■■□□ 2.43
PNKP-203ENST00000593946 NEUROD1Q13562 356 aa30.25■■■□□ 2.43
PNKP-203ENST00000593946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.24■■■□□ 2.431e-7■■■■□ 24.4
PNKP-203ENST00000593946 KIF3BO15066 747 aa30.22■■■□□ 2.43
PNKP-203ENST00000593946 TIMELESSQ9UNS1 1208 aa30.22■■■□□ 2.43
PNKP-203ENST00000593946 TET3O43151 1660 aa30.17■■■□□ 2.42
PNKP-203ENST00000593946 TRHP20396 242 aaPredicted RBP30.16■■■□□ 2.42
PNKP-203ENST00000593946 RPRD2Q5VT52 1461 aaKnown RBP30.16■■■□□ 2.42
PNKP-203ENST00000593946 REREQ9P2R6 1566 aa30.16■■■□□ 2.42
PNKP-203ENST00000593946 KANK1Q14678 1352 aa30.14■■■□□ 2.42
PNKP-203ENST00000593946 ARHGEF40Q8TER5 1519 aa30.14■■■□□ 2.42
PNKP-203ENST00000593946 ATP10AO60312 1499 aa30.14■■■□□ 2.42
PNKP-203ENST00000593946 E9PCH4 1651 aa30.13■■■□□ 2.41
PNKP-203ENST00000593946 TONSLQ96HA7 1378 aa30.12■■■□□ 2.41
PNKP-203ENST00000593946 CEP152O94986 1710 aa30.1■■■□□ 2.41
PNKP-203ENST00000593946 LMTK2Q8IWU2 1503 aa30.09■■■□□ 2.41
PNKP-203ENST00000593946 AGLP35573 1532 aa30.05■■■□□ 2.4
PNKP-203ENST00000593946 EFCAB6Q5THR3 1501 aa30.05■■■□□ 2.4
PNKP-203ENST00000593946 PLA2R1Q13018 1463 aa30.04■■■□□ 2.4
PNKP-203ENST00000593946 SIGLEC1Q9BZZ2 1709 aa30.03■■■□□ 2.4
PNKP-203ENST00000593946 SPHKAPQ2M3C7 1700 aa30.03■■■□□ 2.4
PNKP-203ENST00000593946 ZC3H13Q5T200 1668 aaKnown RBP30.01■■■□□ 2.39
PNKP-203ENST00000593946 ABCC3O15438 1527 aa30■■■□□ 2.39
PNKP-203ENST00000593946 PPP1R15AO75807 674 aaPredicted RBP29.99■■■□□ 2.39
PNKP-203ENST00000593946 GGT6Q6P531 493 aa29.99■■■□□ 2.39
PNKP-203ENST00000593946 CAMSAP1Q5T5Y3 1602 aa29.96■■■□□ 2.39
PNKP-203ENST00000593946 TRPM2O94759 1503 aa29.96■■■□□ 2.39
PNKP-203ENST00000593946 CCDC144AA2RUR9 1427 aa29.96■■■□□ 2.39
PNKP-203ENST00000593946 PTPRTO14522 1441 aa29.95■■■□□ 2.39
PNKP-203ENST00000593946 L3MBTL2Q969R5 705 aa29.93■■■□□ 2.38
PNKP-203ENST00000593946 WASHC2CQ9Y4E1 1318 aa29.9■■■□□ 2.38
PNKP-203ENST00000593946 NPATQ14207 1427 aa29.87■■■□□ 2.37
PNKP-203ENST00000593946 CFAP65Q6ZU64 1925 aaKnown RBP29.86■■■□□ 2.37
PNKP-203ENST00000593946 CLTCL1P53675 1640 aa29.86■■■□□ 2.37
PNKP-203ENST00000593946 ARHGAP31Q2M1Z3 1444 aa29.84■■■□□ 2.37
PNKP-203ENST00000593946 PPP6R1Q9UPN7 881 aa29.82■■■□□ 2.36
PNKP-203ENST00000593946 CLTCQ00610 1675 aaKnown RBP29.79■■■□□ 2.36
PNKP-203ENST00000593946 SPATA31E1Q6ZUB1 1445 aa29.76■■■□□ 2.35
PNKP-203ENST00000593946 CNTLNQ9NXG0 1405 aa29.76■■■□□ 2.35
PNKP-203ENST00000593946 KIF1BO60333 1816 aa29.76■■■□□ 2.35
PNKP-203ENST00000593946 NEURL4Q96JN8 1562 aa29.76■■■□□ 2.35
PNKP-203ENST00000593946 NOS1P29475 1434 aa29.75■■■□□ 2.35
PNKP-203ENST00000593946 UGGT1Q9NYU2 1555 aa29.74■■■□□ 2.35
PNKP-203ENST00000593946 ZNF316A6NFI3 1004 aaPredicted RBP29.74■■■□□ 2.35
PNKP-203ENST00000593946 PREX1Q8TCU6 1659 aa29.73■■■□□ 2.35
PNKP-203ENST00000593946 SYNMO15061 1565 aa29.71■■■□□ 2.35
PNKP-203ENST00000593946 UHRF1BP1Q6BDS2 1440 aa29.71■■■□□ 2.35
PNKP-203ENST00000593946 PIK3C2BO00750 1634 aa29.7■■■□□ 2.35
PNKP-203ENST00000593946 NBPF8Q3BBV2 869 aa29.7■■■□□ 2.34
PNKP-203ENST00000593946 MLECQ14165 292 aa29.68■■■□□ 2.34
PNKP-203ENST00000593946 MROH2AA6NES4 1674 aa29.66■■■□□ 2.34
PNKP-203ENST00000593946 ARID4BQ4LE39 1312 aaPredicted RBP29.66■■■□□ 2.34
PNKP-203ENST00000593946 RGL3Q3MIN7 710 aa29.65■■■□□ 2.34
PNKP-203ENST00000593946 DCAF11Q8TEB1 546 aa29.65■■■□□ 2.34
PNKP-203ENST00000593946 ADGRB3O60242 1522 aa29.63■■■□□ 2.33
PNKP-203ENST00000593946 ERVK-7P63135 1459 aa29.62■■■□□ 2.33
PNKP-203ENST00000593946 IFT172Q9UG01 1749 aa29.6■■■□□ 2.33
PNKP-203ENST00000593946 SPATA31D1Q6ZQQ2 1576 aa29.59■■■□□ 2.33
PNKP-203ENST00000593946 PRAG1Q86YV5 1406 aa29.59■■■□□ 2.33
PNKP-203ENST00000593946 KDM2AQ9Y2K7 1162 aa29.59■■■□□ 2.33
PNKP-203ENST00000593946 RALGAPBQ86X10 1494 aa29.58■■■□□ 2.33
PNKP-203ENST00000593946 TRPM1Q7Z4N2 1603 aa29.57■■■□□ 2.32
PNKP-203ENST00000593946 ZNF326Q5BKZ1 582 aaKnown RBP29.56■■■□□ 2.32
PNKP-203ENST00000593946 ESF1Q9H501 851 aaKnown RBP29.56■■■□□ 2.32
PNKP-203ENST00000593946 FER1L4A9Z1Z3 1794 aa29.55■■■□□ 2.32
PNKP-203ENST00000593946 MADDQ8WXG6 1647 aa29.54■■■□□ 2.32
PNKP-203ENST00000593946 ZMYM3Q14202 1370 aa29.53■■■□□ 2.32
PNKP-203ENST00000593946 FBXO31Q5XUX0 539 aaPredicted RBP29.53■■■□□ 2.32
PNKP-203ENST00000593946 STAC3Q96MF2 364 aa29.53■■■□□ 2.32
PNKP-203ENST00000593946 SLC52A1Q9NWF4 448 aa29.53■■■□□ 2.32
PNKP-203ENST00000593946 PPLO60437 1756 aa29.51■■■□□ 2.32
PNKP-203ENST00000593946 MYO5BQ9ULV0 1848 aa29.51■■■□□ 2.31
PNKP-203ENST00000593946 MYOM2P54296 1465 aa29.49■■■□□ 2.31
PNKP-203ENST00000593946 TMEM131LA2VDJ0 1609 aa29.48■■■□□ 2.31
PNKP-203ENST00000593946 IDI1Q13907 227 aa29.48■■■□□ 2.31
PNKP-203ENST00000593946 C3P01024 1663 aa29.45■■■□□ 2.3
PNKP-203ENST00000593946 EIF4G2P78344 907 aaKnown RBP eCLIP29.44■■■□□ 2.3
PNKP-203ENST00000593946 LAMC1P11047 1609 aa29.44■■■□□ 2.3
PNKP-203ENST00000593946 CHGAP10645 457 aaKnown RBP29.43■■■□□ 2.3
PNKP-203ENST00000593946 KIAA1210Q9ULL0 1709 aa29.42■■■□□ 2.3
PNKP-203ENST00000593946 HSPA5P11021 654 aaKnown RBP29.41■■■□□ 2.3
PNKP-203ENST00000593946 NRXN1Q9ULB1 1477 aa29.41■■■□□ 2.3
PNKP-203ENST00000593946 NEXMIFQ5QGS0 1516 aa29.4■■■□□ 2.3
PNKP-203ENST00000593946 RPGRIP1LQ68CZ1 1315 aa29.4■■■□□ 2.3
PNKP-203ENST00000593946 ROCK2O75116 1388 aaKnown RBP29.4■■■□□ 2.3
PNKP-203ENST00000593946 GPRASP1Q5JY77 1395 aa29.4■■■□□ 2.3
PNKP-203ENST00000593946 HIRIP3Q9BW71 556 aaPredicted RBP29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms