RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 CARMIL1Q5VZK9 1371 aa9.16□□□□□ -0.94
ERCC1-216ENST00000592444 STAG3Q9UJ98 1225 aa9.16□□□□□ -0.94
ERCC1-216ENST00000592444 ATP10BO94823 1461 aa9.15□□□□□ -0.94
ERCC1-216ENST00000592444 SPDYE4A6NLX3 237 aa9.15□□□□□ -0.94
ERCC1-216ENST00000592444 SUPT6HQ7KZ85 1726 aaKnown RBP9.14□□□□□ -0.95
ERCC1-216ENST00000592444 RXRBP28702 533 aa9.13□□□□□ -0.95
ERCC1-216ENST00000592444 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
ERCC1-216ENST00000592444 YY1P25490 414 aa9.12□□□□□ -0.95
ERCC1-216ENST00000592444 NPATQ14207 1427 aa9.12□□□□□ -0.95
ERCC1-216ENST00000592444 ZNF772Q68DY9 489 aaPredicted RBP9.11□□□□□ -0.95
ERCC1-216ENST00000592444 CFAP74Q9C0B2 1584 aa9.11□□□□□ -0.95
ERCC1-216ENST00000592444 RNF17Q9BXT8 1623 aaKnown RBP9.1□□□□□ -0.95
ERCC1-216ENST00000592444 PAK3O75914 559 aaPredicted RBP9.1□□□□□ -0.95
ERCC1-216ENST00000592444 SCAPERQ9BY12 1400 aa9.1□□□□□ -0.95
ERCC1-216ENST00000592444 VWDEQ8N2E2 1590 aa9.1□□□□□ -0.95
ERCC1-216ENST00000592444 KIF27Q86VH2 1401 aa9.09□□□□□ -0.95
ERCC1-216ENST00000592444 SENP3-EIF4A1A0A087X0R7 540 aa9.09□□□□□ -0.95
ERCC1-216ENST00000592444 CEP170BQ9Y4F5 1589 aaPredicted RBP9.08□□□□□ -0.96
ERCC1-216ENST00000592444 ZNF142P52746 1687 aaPredicted RBP9.08□□□□□ -0.96
ERCC1-216ENST00000592444 CNTLNQ9NXG0 1405 aa9.07□□□□□ -0.96
ERCC1-216ENST00000592444 MYO3AQ8NEV4 1616 aa9.07□□□□□ -0.96
ERCC1-216ENST00000592444 PLSCR2Q9NRY7 297 aa9.07□□□□□ -0.96
ERCC1-216ENST00000592444 CREBZFQ9NS37 354 aa9.07□□□□□ -0.96
ERCC1-216ENST00000592444 CDK12Q9NYV4 1490 aaPredicted RBP9.07□□□□□ -0.96
ERCC1-216ENST00000592444 NUTM2BA6NNL0 878 aaPredicted RBP9.06□□□□□ -0.96
ERCC1-216ENST00000592444 NUTM2EB1AL46 878 aaPredicted RBP9.06□□□□□ -0.96
ERCC1-216ENST00000592444 NUTM2DQ5VT03 806 aaPredicted RBP9.06□□□□□ -0.96
ERCC1-216ENST00000592444 NUTM2AQ8IVF1 878 aaPredicted RBP9.06□□□□□ -0.96
ERCC1-216ENST00000592444 NEURL4Q96JN8 1562 aa9.06□□□□□ -0.96
ERCC1-216ENST00000592444 FAM135BQ49AJ0 1406 aa9.05□□□□□ -0.96
ERCC1-216ENST00000592444 ZMYM3Q14202 1370 aa9.05□□□□□ -0.96
ERCC1-216ENST00000592444 MEX3CQ5U5Q3 659 aaKnown RBP9.05□□□□□ -0.96
ERCC1-216ENST00000592444 MYT1LQ9UL68 1186 aa9.05□□□□□ -0.96
ERCC1-216ENST00000592444 AGLP35573 1532 aa9.05□□□□□ -0.96
ERCC1-216ENST00000592444 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.04□□□□□ -0.96
ERCC1-216ENST00000592444 POLR1AO95602 1720 aaPredicted RBP9.03□□□□□ -0.96
ERCC1-216ENST00000592444 STRCP1A6NGW2 1772 aa9.03□□□□□ -0.96
ERCC1-216ENST00000592444 LRP5O75197 1615 aa9.02□□□□□ -0.96
ERCC1-216ENST00000592444 RAPGEF6Q8TEU7 1601 aa9.02□□□□□ -0.96
ERCC1-216ENST00000592444 GALR2O43603 387 aaPredicted RBP9.02□□□□□ -0.97
ERCC1-216ENST00000592444 GOLGA3Q08378 1498 aa9.02□□□□□ -0.97
ERCC1-216ENST00000592444 LRP6O75581 1613 aa9.02□□□□□ -0.97
ERCC1-216ENST00000592444 JCADQ9P266 1359 aa9.01□□□□□ -0.97
ERCC1-216ENST00000592444 DIP2CQ9Y2E4 1556 aa9.01□□□□□ -0.97
ERCC1-216ENST00000592444 DNMT1P26358 1616 aaKnown RBP9.01□□□□□ -0.97
ERCC1-216ENST00000592444 RGS12O14924 1447 aa9□□□□□ -0.97
ERCC1-216ENST00000592444 FAM9AQ8IZU1 332 aaPredicted RBP9□□□□□ -0.97
ERCC1-216ENST00000592444 AFAP1Q8N556 730 aa9□□□□□ -0.97
ERCC1-216ENST00000592444 MROH2AA6NES4 1674 aa9□□□□□ -0.97
ERCC1-216ENST00000592444 SYNMO15061 1565 aa8.99□□□□□ -0.97
ERCC1-216ENST00000592444 REREQ9P2R6 1566 aa8.99□□□□□ -0.97
ERCC1-216ENST00000592444 ANKLE2Q86XL3 938 aa8.99□□□□□ -0.97
ERCC1-216ENST00000592444 A2ML1A8K2U0 1454 aa8.99□□□□□ -0.97
ERCC1-216ENST00000592444 ATAD2Q6PL18 1390 aa8.99□□□□□ -0.97
ERCC1-216ENST00000592444 CDK13Q14004 1512 aaKnown RBP8.98□□□□□ -0.97
ERCC1-216ENST00000592444 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.98□□□□□ -0.97
ERCC1-216ENST00000592444 ROBO1Q9Y6N7 1651 aa8.97□□□□□ -0.97
ERCC1-216ENST00000592444 NPHP4O75161 1426 aaPredicted RBP8.97□□□□□ -0.97
ERCC1-216ENST00000592444 PLEKHD1A6NEE1 506 aa8.97□□□□□ -0.97
ERCC1-216ENST00000592444 P3H3Q8IVL6 736 aa8.96□□□□□ -0.98
ERCC1-216ENST00000592444 CEP350Q5VT06 3117 aa8.96□□□□□ -0.98
ERCC1-216ENST00000592444 ZNF518AQ6AHZ1 1483 aa8.96□□□□□ -0.98
ERCC1-216ENST00000592444 EP400Q96L91 3159 aa8.96□□□□□ -0.98
ERCC1-216ENST00000592444 ABCA6Q8N139 1617 aa8.95□□□□□ -0.98
ERCC1-216ENST00000592444 PHF12Q96QT6 1004 aa8.95□□□□□ -0.98
ERCC1-216ENST00000592444 SPATA31A6Q5VVP1 1343 aa8.95□□□□□ -0.98
ERCC1-216ENST00000592444 RBM6P78332 1123 aaKnown RBP8.94□□□□□ -0.98
ERCC1-216ENST00000592444 PROM2Q8N271 834 aa8.94□□□□□ -0.98
ERCC1-216ENST00000592444 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
ERCC1-216ENST00000592444 OTUD5Q96G74 571 aa8.93□□□□□ -0.98
ERCC1-216ENST00000592444 QTRT2Q9H974 415 aaKnown RBP8.93□□□□□ -0.98
ERCC1-216ENST00000592444 AFF2P51816 1311 aa8.93□□□□□ -0.98
ERCC1-216ENST00000592444 PLCH2O75038 1416 aa8.93□□□□□ -0.98
ERCC1-216ENST00000592444 MED14O60244 1454 aa8.93□□□□□ -0.98
ERCC1-216ENST00000592444 KDM5CP41229 1560 aa8.93□□□□□ -0.98
ERCC1-216ENST00000592444 XIRP1Q702N8 1843 aaKnown RBP8.93□□□□□ -0.98
ERCC1-216ENST00000592444 CLTCQ00610 1675 aaKnown RBP8.92□□□□□ -0.98
ERCC1-216ENST00000592444 C1QTNF8P60827 252 aa8.92□□□□□ -0.98
ERCC1-216ENST00000592444 EFCAB2Q5VUJ9 269 aa8.92□□□□□ -0.98
ERCC1-216ENST00000592444 SLC34A2O95436 690 aa8.91□□□□□ -0.98
ERCC1-216ENST00000592444 CCDC125Q86Z20 511 aa8.91□□□□□ -0.98
ERCC1-216ENST00000592444 IQGAP1P46940 1657 aa8.91□□□□□ -0.98
ERCC1-216ENST00000592444 ABCC1P33527 1531 aa8.9□□□□□ -0.98
ERCC1-216ENST00000592444 HRCP23327 699 aa8.9□□□□□ -0.98
ERCC1-216ENST00000592444 PSDA5PKW4 1024 aaPredicted RBP8.89□□□□□ -0.99
ERCC1-216ENST00000592444 MNX1P50219 401 aaPredicted RBP8.89□□□□□ -0.99
ERCC1-216ENST00000592444 THEMISQ8N1K5 641 aaPredicted RBP8.89□□□□□ -0.99
ERCC1-216ENST00000592444 NUP153P49790 1475 aaKnown RBP8.89□□□□□ -0.99
ERCC1-216ENST00000592444 MLH3Q9UHC1 1453 aa8.89□□□□□ -0.99
ERCC1-216ENST00000592444 DEPDC5O75140 1603 aa8.88□□□□□ -0.99
ERCC1-216ENST00000592444 NHSL1Q5SYE7 1610 aa8.88□□□□□ -0.99
ERCC1-216ENST00000592444 CTTNBP2Q8WZ74 1663 aa8.88□□□□□ -0.99
ERCC1-216ENST00000592444 POTEB2H3BUK9 544 aa8.87□□□□□ -0.99
ERCC1-216ENST00000592444 ZNF784Q8NCA9 323 aaPredicted RBP8.87□□□□□ -0.99
ERCC1-216ENST00000592444 ITSN2Q9NZM3 1697 aa8.87□□□□□ -0.99
ERCC1-216ENST00000592444 COL16A1Q07092 1604 aaPredicted RBP8.87□□□□□ -0.99
ERCC1-216ENST00000592444 POTEMA6NI47 508 aa8.86□□□□□ -0.99
ERCC1-216ENST00000592444 DEFB132Q7Z7B7 95 aa8.86□□□□□ -0.99
ERCC1-216ENST00000592444 NGLY1Q96IV0 654 aa8.86□□□□□ -0.99
ERCC1-216ENST00000592444 FGD6Q6ZV73 1430 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms