RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 SIN3AQ96ST3 1273 aa33.21■■■□□ 2.91
SPHK1-210ENST00000592299 KIF3BO15066 747 aa33.2■■■□□ 2.91
SPHK1-210ENST00000592299 COL17A1Q9UMD9 1497 aaPredicted RBP33.2■■■□□ 2.9
SPHK1-210ENST00000592299 NEUROD1Q13562 356 aa33.18■■■□□ 2.9
SPHK1-210ENST00000592299 YEATS2Q9ULM3 1422 aa33.18■■■□□ 2.9
SPHK1-210ENST00000592299 PKD2Q13563 968 aa33.17■■■□□ 2.9
SPHK1-210ENST00000592299 DIP2CQ9Y2E4 1556 aa33.17■■■□□ 2.9
SPHK1-210ENST00000592299 EIF2AK4Q9P2K8 1649 aaKnown RBP33.17■■■□□ 2.9
SPHK1-210ENST00000592299 FAM135AQ9P2D6 1515 aa33.16■■■□□ 2.9
SPHK1-210ENST00000592299 MAGI2Q86UL8 1455 aa33.14■■■□□ 2.9
SPHK1-210ENST00000592299 IQGAP3Q86VI3 1631 aa33.11■■■□□ 2.89
SPHK1-210ENST00000592299 DEPDC5O75140 1603 aa33.1■■■□□ 2.89
SPHK1-210ENST00000592299 ANKRD30BQ9BXX2 1392 aa33.06■■■□□ 2.88
SPHK1-210ENST00000592299 KANK1Q14678 1352 aa33.06■■■□□ 2.88
SPHK1-210ENST00000592299 ATP10AO60312 1499 aa33.03■■■□□ 2.88
SPHK1-210ENST00000592299 GGT6Q6P531 493 aa33.01■■■□□ 2.87
SPHK1-210ENST00000592299 PRDM15P57071 1507 aaPredicted RBP33.01■■■□□ 2.87
SPHK1-210ENST00000592299 MROH1Q8NDA8 1641 aa33■■■□□ 2.87
SPHK1-210ENST00000592299 RNF17Q9BXT8 1623 aaKnown RBP33■■■□□ 2.87
SPHK1-210ENST00000592299 BCORL1Q5H9F3 1711 aa32.99■■■□□ 2.87
SPHK1-210ENST00000592299 VWDEQ8N2E2 1590 aa32.96■■■□□ 2.87
SPHK1-210ENST00000592299 ARHGEF40Q8TER5 1519 aa32.95■■■□□ 2.87
SPHK1-210ENST00000592299 TONSLQ96HA7 1378 aa32.95■■■□□ 2.87
SPHK1-210ENST00000592299 TIMELESSQ9UNS1 1208 aa32.95■■■□□ 2.86
SPHK1-210ENST00000592299 REREQ9P2R6 1566 aa32.91■■■□□ 2.86
SPHK1-210ENST00000592299 TET3O43151 1660 aa32.9■■■□□ 2.86
SPHK1-210ENST00000592299 RPRD2Q5VT52 1461 aaKnown RBP32.89■■■□□ 2.86
SPHK1-210ENST00000592299 CEP152O94986 1710 aa32.87■■■□□ 2.85
SPHK1-210ENST00000592299 WASHC2CQ9Y4E1 1318 aa32.87■■■□□ 2.85
SPHK1-210ENST00000592299 E9PCH4 1651 aa32.86■■■□□ 2.85
SPHK1-210ENST00000592299 AGLP35573 1532 aa32.83■■■□□ 2.85
SPHK1-210ENST00000592299 LMTK2Q8IWU2 1503 aa32.82■■■□□ 2.84
SPHK1-210ENST00000592299 SIGLEC1Q9BZZ2 1709 aa32.8■■■□□ 2.84
SPHK1-210ENST00000592299 PLA2R1Q13018 1463 aa32.79■■■□□ 2.84
SPHK1-210ENST00000592299 ABCC3O15438 1527 aa32.79■■■□□ 2.84
SPHK1-210ENST00000592299 EFCAB6Q5THR3 1501 aa32.79■■■□□ 2.84
SPHK1-210ENST00000592299 CCDC144AA2RUR9 1427 aa32.79■■■□□ 2.84
SPHK1-210ENST00000592299 PPP1R15AO75807 674 aaPredicted RBP32.76■■■□□ 2.83
SPHK1-210ENST00000592299 MLECQ14165 292 aa32.74■■■□□ 2.83
SPHK1-210ENST00000592299 L3MBTL2Q969R5 705 aa32.74■■■□□ 2.83
SPHK1-210ENST00000592299 ARID4BQ4LE39 1312 aaPredicted RBP32.74■■■□□ 2.83
SPHK1-210ENST00000592299 SPHKAPQ2M3C7 1700 aa32.73■■■□□ 2.83
SPHK1-210ENST00000592299 ZC3H13Q5T200 1668 aaKnown RBP32.73■■■□□ 2.83
SPHK1-210ENST00000592299 CAMSAP1Q5T5Y3 1602 aa32.71■■■□□ 2.83
SPHK1-210ENST00000592299 PTPRTO14522 1441 aa32.7■■■□□ 2.83
SPHK1-210ENST00000592299 NPATQ14207 1427 aa32.69■■■□□ 2.82
SPHK1-210ENST00000592299 PPP6R1Q9UPN7 881 aa32.68■■■□□ 2.82
SPHK1-210ENST00000592299 TRPM2O94759 1503 aa32.68■■■□□ 2.82
SPHK1-210ENST00000592299 CFAP65Q6ZU64 1925 aaKnown RBP32.67■■■□□ 2.82
SPHK1-210ENST00000592299 ARHGAP31Q2M1Z3 1444 aa32.6■■■□□ 2.81
SPHK1-210ENST00000592299 ESF1Q9H501 851 aaKnown RBP32.6■■■□□ 2.81
SPHK1-210ENST00000592299 RGL3Q3MIN7 710 aa32.59■■■□□ 2.81
SPHK1-210ENST00000592299 CLTCL1P53675 1640 aa32.59■■■□□ 2.81
SPHK1-210ENST00000592299 CLTCQ00610 1675 aaKnown RBP32.58■■■□□ 2.81
SPHK1-210ENST00000592299 UGGT1Q9NYU2 1555 aa32.54■■■□□ 2.8
SPHK1-210ENST00000592299 CNTLNQ9NXG0 1405 aa32.54■■■□□ 2.8
SPHK1-210ENST00000592299 DCAF11Q8TEB1 546 aa32.52■■■□□ 2.8
SPHK1-210ENST00000592299 KDM2AQ9Y2K7 1162 aa32.51■■■□□ 2.79
SPHK1-210ENST00000592299 NOS1P29475 1434 aa32.5■■■□□ 2.79
SPHK1-210ENST00000592299 ZNF326Q5BKZ1 582 aaKnown RBP32.49■■■□□ 2.79
SPHK1-210ENST00000592299 SPATA31E1Q6ZUB1 1445 aa32.48■■■□□ 2.79
SPHK1-210ENST00000592299 NBPF8Q3BBV2 869 aa32.47■■■□□ 2.79
SPHK1-210ENST00000592299 PREX1Q8TCU6 1659 aa32.47■■■□□ 2.79
SPHK1-210ENST00000592299 FBXO31Q5XUX0 539 aaPredicted RBP32.46■■■□□ 2.79
SPHK1-210ENST00000592299 KIF1BO60333 1816 aa32.46■■■□□ 2.79
SPHK1-210ENST00000592299 ZNF316A6NFI3 1004 aaPredicted RBP32.44■■■□□ 2.78
SPHK1-210ENST00000592299 SYNMO15061 1565 aa32.44■■■□□ 2.78
SPHK1-210ENST00000592299 ZMYM3Q14202 1370 aa32.43■■■□□ 2.78
SPHK1-210ENST00000592299 CHGAP10645 457 aaKnown RBP32.42■■■□□ 2.78
SPHK1-210ENST00000592299 ERVK-7P63135 1459 aa32.41■■■□□ 2.78
SPHK1-210ENST00000592299 SLC52A1Q9NWF4 448 aa32.37■■■□□ 2.77
SPHK1-210ENST00000592299 PIK3C2BO00750 1634 aa32.37■■■□□ 2.77
SPHK1-210ENST00000592299 UHRF1BP1Q6BDS2 1440 aa32.37■■■□□ 2.77
SPHK1-210ENST00000592299 NEURL4Q96JN8 1562 aa32.36■■■□□ 2.77
SPHK1-210ENST00000592299 IDI1Q13907 227 aa32.36■■■□□ 2.77
SPHK1-210ENST00000592299 MROH2AA6NES4 1674 aa32.34■■■□□ 2.77
SPHK1-210ENST00000592299 FER1L4A9Z1Z3 1794 aa32.33■■■□□ 2.77
SPHK1-210ENST00000592299 ADGRB3O60242 1522 aa32.32■■■□□ 2.77
SPHK1-210ENST00000592299 SPATA31D1Q6ZQQ2 1576 aa32.32■■■□□ 2.76
SPHK1-210ENST00000592299 PRAG1Q86YV5 1406 aa32.3■■■□□ 2.76
SPHK1-210ENST00000592299 STAC3Q96MF2 364 aa32.27■■■□□ 2.76
SPHK1-210ENST00000592299 CEBPAP49715 358 aaPredicted RBP32.24■■■□□ 2.75
SPHK1-210ENST00000592299 RALGAPBQ86X10 1494 aa32.24■■■□□ 2.75
SPHK1-210ENST00000592299 HIRIP3Q9BW71 556 aaPredicted RBP32.23■■■□□ 2.75
SPHK1-210ENST00000592299 PLPPR3Q6T4P5 718 aa32.23■■■□□ 2.75
SPHK1-210ENST00000592299 STAG3Q9UJ98 1225 aa32.23■■■□□ 2.75
SPHK1-210ENST00000592299 EIF4G2P78344 907 aaKnown RBP eCLIP32.21■■■□□ 2.75
SPHK1-210ENST00000592299 C3P01024 1663 aa32.21■■■□□ 2.75
SPHK1-210ENST00000592299 TNRQ92752 1358 aa32.2■■■□□ 2.75
SPHK1-210ENST00000592299 IFT172Q9UG01 1749 aa32.2■■■□□ 2.74
SPHK1-210ENST00000592299 MADDQ8WXG6 1647 aa32.19■■■□□ 2.74
SPHK1-210ENST00000592299 RPGRIP1LQ68CZ1 1315 aa32.19■■■□□ 2.74
SPHK1-210ENST00000592299 TMEM131LA2VDJ0 1609 aa32.19■■■□□ 2.74
SPHK1-210ENST00000592299 TRPM1Q7Z4N2 1603 aa32.19■■■□□ 2.74
SPHK1-210ENST00000592299 MYO5BQ9ULV0 1848 aa32.18■■■□□ 2.74
SPHK1-210ENST00000592299 ROCK2O75116 1388 aaKnown RBP32.18■■■□□ 2.74
SPHK1-210ENST00000592299 CARD11Q9BXL7 1154 aa32.16■■■□□ 2.74
SPHK1-210ENST00000592299 MYOM2P54296 1465 aa32.16■■■□□ 2.74
SPHK1-210ENST00000592299 HSPA5P11021 654 aaKnown RBP32.16■■■□□ 2.74
SPHK1-210ENST00000592299 PPLO60437 1756 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms