RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 MAGI2Q86UL8 1455 aa15.92■□□□□ 0.14
TPM4-213ENST00000591226 RTEL1-TNFRSF6BF6WH68 1400 aa15.91■□□□□ 0.14
TPM4-213ENST00000591226 ADGRL1O94910 1474 aa15.91■□□□□ 0.14
TPM4-213ENST00000591226 WASHC2AQ641Q2 1341 aa15.89■□□□□ 0.13
TPM4-213ENST00000591226 INO80Q9ULG1 1556 aaPredicted RBP15.89■□□□□ 0.13
TPM4-213ENST00000591226 ZNF326Q5BKZ1 582 aaKnown RBP15.89■□□□□ 0.13
TPM4-213ENST00000591226 SCAPERQ9BY12 1400 aa15.89■□□□□ 0.13
TPM4-213ENST00000591226 ATP7AQ04656 1500 aa15.88■□□□□ 0.13
TPM4-213ENST00000591226 BCL11AQ9H165 835 aa15.88■□□□□ 0.13
TPM4-213ENST00000591226 PLA2R1Q13018 1463 aa15.87■□□□□ 0.13
TPM4-213ENST00000591226 SPATA31E1Q6ZUB1 1445 aa15.87■□□□□ 0.13
TPM4-213ENST00000591226 CCDC144AA2RUR9 1427 aa15.86■□□□□ 0.13
TPM4-213ENST00000591226 UHRF1BP1Q6BDS2 1440 aa15.86■□□□□ 0.13
TPM4-213ENST00000591226 ANP32CO43423 234 aa15.84■□□□□ 0.13
TPM4-213ENST00000591226 C11orf95C9JLR9 678 aaPredicted RBP15.84■□□□□ 0.13
TPM4-213ENST00000591226 RALGAPBQ86X10 1494 aa15.83■□□□□ 0.12
TPM4-213ENST00000591226 CD109Q6YHK3 1445 aa15.83■□□□□ 0.12
TPM4-213ENST00000591226 CCDC7Q96M83 1385 aa15.82■□□□□ 0.12
TPM4-213ENST00000591226 DCAF11Q8TEB1 546 aa15.82■□□□□ 0.12
TPM4-213ENST00000591226 KDM2AQ9Y2K7 1162 aa15.82■□□□□ 0.12
TPM4-213ENST00000591226 GTF3C3Q9Y5Q9 886 aa15.82■□□□□ 0.12
TPM4-213ENST00000591226 DEPDC5O75140 1603 aa15.82■□□□□ 0.12
TPM4-213ENST00000591226 MYT1LQ9UL68 1186 aa15.81■□□□□ 0.12
TPM4-213ENST00000591226 USP47Q96K76 1375 aa15.81■□□□□ 0.12
TPM4-213ENST00000591226 CFAP74Q9C0B2 1584 aa15.8■□□□□ 0.12
TPM4-213ENST00000591226 ATP10AO60312 1499 aa15.8■□□□□ 0.12
TPM4-213ENST00000591226 KDM5CP41229 1560 aa15.8■□□□□ 0.12
TPM4-213ENST00000591226 POLR1AO95602 1720 aaPredicted RBP15.8■□□□□ 0.12
TPM4-213ENST00000591226 KIDINS220Q9ULH0 1771 aa15.79■□□□□ 0.12
TPM4-213ENST00000591226 E9PCH4 1651 aa15.79■□□□□ 0.12
TPM4-213ENST00000591226 ZNF518AQ6AHZ1 1483 aa15.79■□□□□ 0.12
TPM4-213ENST00000591226 CNTLNQ9NXG0 1405 aa15.78■□□□□ 0.12
TPM4-213ENST00000591226 CCER2I3L3R5 266 aa15.78■□□□□ 0.12
TPM4-213ENST00000591226 KIF7Q2M1P5 1343 aa15.77■□□□□ 0.12
TPM4-213ENST00000591226 RGL3Q3MIN7 710 aa15.77■□□□□ 0.12
TPM4-213ENST00000591226 A2MP01023 1474 aa15.77■□□□□ 0.12
TPM4-213ENST00000591226 EIF2AK4Q9P2K8 1649 aaKnown RBP15.77■□□□□ 0.12
TPM4-213ENST00000591226 DHX29Q7Z478 1369 aaKnown RBP15.77■□□□□ 0.11
TPM4-213ENST00000591226 POGZQ7Z3K3 1410 aa15.76■□□□□ 0.11
TPM4-213ENST00000591226 BCORL1Q5H9F3 1711 aa15.76■□□□□ 0.11
TPM4-213ENST00000591226 KIF3BO15066 747 aa15.76■□□□□ 0.11
TPM4-213ENST00000591226 VWDEQ8N2E2 1590 aa15.75■□□□□ 0.11
TPM4-213ENST00000591226 PRAG1Q86YV5 1406 aa15.75■□□□□ 0.11
TPM4-213ENST00000591226 CARD11Q9BXL7 1154 aa15.75■□□□□ 0.11
TPM4-213ENST00000591226 TET3O43151 1660 aa15.75■□□□□ 0.11
TPM4-213ENST00000591226 MROH1Q8NDA8 1641 aa15.75■□□□□ 0.11
TPM4-213ENST00000591226 CYB5RLQ6IPT4 315 aa15.74■□□□□ 0.11
TPM4-213ENST00000591226 PRDM15P57071 1507 aaPredicted RBP15.74■□□□□ 0.11
TPM4-213ENST00000591226 RIMBP3CA6NJZ7 1639 aa15.74■□□□□ 0.11
TPM4-213ENST00000591226 RIMBP3BA6NNM3 1639 aa15.74■□□□□ 0.11
TPM4-213ENST00000591226 RIMBP3Q9UFD9 1639 aa15.74■□□□□ 0.11
TPM4-213ENST00000591226 KANK1Q14678 1352 aa15.74■□□□□ 0.11
TPM4-213ENST00000591226 TRPM1Q7Z4N2 1603 aa15.74■□□□□ 0.11
TPM4-213ENST00000591226 TRPM2O94759 1503 aa15.73■□□□□ 0.11
TPM4-213ENST00000591226 SPHKAPQ2M3C7 1700 aa15.73■□□□□ 0.11
TPM4-213ENST00000591226 ROCK2O75116 1388 aaKnown RBP15.72■□□□□ 0.11
TPM4-213ENST00000591226 HECW2Q9P2P5 1572 aa15.71■□□□□ 0.11
TPM4-213ENST00000591226 PTPRTO14522 1441 aa15.71■□□□□ 0.1
TPM4-213ENST00000591226 NEO1Q92859 1461 aa15.71■□□□□ 0.1
TPM4-213ENST00000591226 MLH3Q9UHC1 1453 aa15.7■□□□□ 0.1
TPM4-213ENST00000591226 CLTCL1P53675 1640 aa15.69■□□□□ 0.1
TPM4-213ENST00000591226 FRMPD1Q5SYB0 1578 aa15.68■□□□□ 0.1
TPM4-213ENST00000591226 MAP3K4Q9Y6R4 1608 aa15.68■□□□□ 0.1
TPM4-213ENST00000591226 CEP152O94986 1710 aa15.68■□□□□ 0.1
TPM4-213ENST00000591226 ABCA6Q8N139 1617 aa15.67■□□□□ 0.1
TPM4-213ENST00000591226 RNF17Q9BXT8 1623 aaKnown RBP15.67■□□□□ 0.1
TPM4-213ENST00000591226 ZBTB22O15209 634 aa15.67■□□□□ 0.1
TPM4-213ENST00000591226 ST20-MTHFSA0A0A6YYL1 179 aa15.67■□□□□ 0.1
TPM4-213ENST00000591226 NBPF1Q3BBV0 1214 aa15.67■□□□□ 0.1
TPM4-213ENST00000591226 POLR3GLQ9BT43 218 aa15.66■□□□□ 0.1
TPM4-213ENST00000591226 EFCAB6Q5THR3 1501 aa15.66■□□□□ 0.1
TPM4-213ENST00000591226 RAPGEF3O95398 923 aa15.66■□□□□ 0.1
TPM4-213ENST00000591226 GPRASP1Q5JY77 1395 aa15.65■□□□□ 0.1
TPM4-213ENST00000591226 PPRC1Q5VV67 1664 aaKnown RBP15.65■□□□□ 0.1
TPM4-213ENST00000591226 ARID4BQ4LE39 1312 aaPredicted RBP15.65■□□□□ 0.1
TPM4-213ENST00000591226 LAMC1P11047 1609 aa15.64■□□□□ 0.09
TPM4-213ENST00000591226 GLI2P10070 1586 aa15.64■□□□□ 0.09
TPM4-213ENST00000591226 PRKRIP1Q9H875 184 aaPredicted RBP15.63■□□□□ 0.09
TPM4-213ENST00000591226 LMTK2Q8IWU2 1503 aa15.63■□□□□ 0.09
TPM4-213ENST00000591226 RICTORQ6R327 1708 aa15.63■□□□□ 0.09
TPM4-213ENST00000591226 TAOK2Q9UL54 1235 aa15.62■□□□□ 0.09
TPM4-213ENST00000591226 UGGT1Q9NYU2 1555 aa15.62■□□□□ 0.09
TPM4-213ENST00000591226 MADDQ8WXG6 1647 aa15.62■□□□□ 0.09
TPM4-213ENST00000591226 DIP2CQ9Y2E4 1556 aa15.61■□□□□ 0.09
TPM4-213ENST00000591226 DIP2BQ9P265 1576 aa15.6■□□□□ 0.09
TPM4-213ENST00000591226 GGT6Q6P531 493 aa15.6■□□□□ 0.09
TPM4-213ENST00000591226 CCDC184Q52MB2 194 aa15.59■□□□□ 0.09
TPM4-213ENST00000591226 FAM69CQ0P6D2 419 aa15.58■□□□□ 0.08
TPM4-213ENST00000591226 NEURL4Q96JN8 1562 aa15.57■□□□□ 0.08
TPM4-213ENST00000591226 ABCC3O15438 1527 aa15.57■□□□□ 0.08
TPM4-213ENST00000591226 NPATQ14207 1427 aa15.56■□□□□ 0.08
TPM4-213ENST00000591226 YEATS2Q9ULM3 1422 aa15.56■□□□□ 0.08
TPM4-213ENST00000591226 KIF1BO60333 1816 aa15.56■□□□□ 0.08
TPM4-213ENST00000591226 MROH2AA6NES4 1674 aa15.55■□□□□ 0.08
TPM4-213ENST00000591226 TSPOAP1O95153 1857 aa15.54■□□□□ 0.08
TPM4-213ENST00000591226 COL17A1Q9UMD9 1497 aaPredicted RBP15.54■□□□□ 0.08
TPM4-213ENST00000591226 CFAP65Q6ZU64 1925 aaKnown RBP15.54■□□□□ 0.08
TPM4-213ENST00000591226 STAC3Q96MF2 364 aa15.54■□□□□ 0.08
TPM4-213ENST00000591226 TESK2Q96S53 571 aa15.54■□□□□ 0.08
TPM4-213ENST00000591226 WASHC2CQ9Y4E1 1318 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms