RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 ACIN1Q9UKV3 1341 aaKnown RBP25.53■■□□□ 1.68
RPRD1A-209ENST00000590898 DEPDC5O75140 1603 aa25.51■■□□□ 1.67
RPRD1A-209ENST00000590898 MLECQ14165 292 aa25.5■■□□□ 1.67
RPRD1A-209ENST00000590898 HRCP23327 699 aa25.49■■□□□ 1.67
RPRD1A-209ENST00000590898 FAM135AQ9P2D6 1515 aa25.47■■□□□ 1.67
RPRD1A-209ENST00000590898 ADAMTSL3P82987 1691 aa25.47■■□□□ 1.67
RPRD1A-209ENST00000590898 MROH1Q8NDA8 1641 aa25.46■■□□□ 1.67
RPRD1A-209ENST00000590898 PRDM15P57071 1507 aaPredicted RBP25.46■■□□□ 1.67
RPRD1A-209ENST00000590898 UNC13BO14795 1591 aa25.45■■□□□ 1.67
RPRD1A-209ENST00000590898 KANK1Q14678 1352 aa25.44■■□□□ 1.66
RPRD1A-209ENST00000590898 RAB3GAP2Q9H2M9 1393 aa25.44■■□□□ 1.66
RPRD1A-209ENST00000590898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.43■■□□□ 1.662e-7■■■□□ 16.7
RPRD1A-209ENST00000590898 ESF1Q9H501 851 aaKnown RBP25.43■■□□□ 1.66
RPRD1A-209ENST00000590898 KDM5DQ9BY66 1539 aa25.42■■□□□ 1.66
RPRD1A-209ENST00000590898 WASHC2CQ9Y4E1 1318 aa25.42■■□□□ 1.66
RPRD1A-209ENST00000590898 CNTLNQ9NXG0 1405 aa25.41■■□□□ 1.66
RPRD1A-209ENST00000590898 FER1L4A9Z1Z3 1794 aa25.41■■□□□ 1.66
RPRD1A-209ENST00000590898 VWDEQ8N2E2 1590 aa25.41■■□□□ 1.66
RPRD1A-209ENST00000590898 NUP155O75694 1391 aa25.4■■□□□ 1.66
RPRD1A-209ENST00000590898 ZC3H13Q5T200 1668 aaKnown RBP25.39■■□□□ 1.66
RPRD1A-209ENST00000590898 MADDQ8WXG6 1647 aa25.38■■□□□ 1.65
RPRD1A-209ENST00000590898 KDM4FA0A1W2PPD8 638 aa25.37■■□□□ 1.65
RPRD1A-209ENST00000590898 TRIM52Q96A61 297 aa25.36■■□□□ 1.65
RPRD1A-209ENST00000590898 IQGAP3Q86VI3 1631 aa25.36■■□□□ 1.65
RPRD1A-209ENST00000590898 ABCC3O15438 1527 aa25.36■■□□□ 1.65
RPRD1A-209ENST00000590898 LMTK2Q8IWU2 1503 aa25.36■■□□□ 1.65
RPRD1A-209ENST00000590898 CLTCQ00610 1675 aaKnown RBP25.35■■□□□ 1.65
RPRD1A-209ENST00000590898 MROH2AA6NES4 1674 aa25.35■■□□□ 1.65
RPRD1A-209ENST00000590898 CEP152O94986 1710 aa25.34■■□□□ 1.65
RPRD1A-209ENST00000590898 ZMYM3Q14202 1370 aa25.32■■□□□ 1.64
RPRD1A-209ENST00000590898 RIMS1Q86UR5 1692 aaKnown RBP25.31■■□□□ 1.64
RPRD1A-209ENST00000590898 TET3O43151 1660 aa25.29■■□□□ 1.64
RPRD1A-209ENST00000590898 ARHGAP31Q2M1Z3 1444 aa25.29■■□□□ 1.64
RPRD1A-209ENST00000590898 CAMSAP1Q5T5Y3 1602 aa25.28■■□□□ 1.64
RPRD1A-209ENST00000590898 PZPP20742 1482 aa25.27■■□□□ 1.64
RPRD1A-209ENST00000590898 SLC4A1APQ9BWU0 796 aaKnown RBP25.26■■□□□ 1.63
RPRD1A-209ENST00000590898 PTPRMP28827 1452 aa25.26■■□□□ 1.63
RPRD1A-209ENST00000590898 C3P01024 1663 aa25.25■■□□□ 1.63
RPRD1A-209ENST00000590898 MPHOSPH9Q99550 1183 aa25.25■■□□□ 1.63
RPRD1A-209ENST00000590898 EFCAB6Q5THR3 1501 aa25.25■■□□□ 1.63
RPRD1A-209ENST00000590898 CFAP65Q6ZU64 1925 aaKnown RBP25.24■■□□□ 1.63
RPRD1A-209ENST00000590898 RPRD2Q5VT52 1461 aaKnown RBP25.24■■□□□ 1.63
RPRD1A-209ENST00000590898 SETD1BQ9UPS6 1966 aaKnown RBP25.24■■□□□ 1.63
RPRD1A-209ENST00000590898 NPATQ14207 1427 aa25.22■■□□□ 1.63
RPRD1A-209ENST00000590898 E9PCH4 1651 aa25.2■■□□□ 1.62
RPRD1A-209ENST00000590898 CEBPAP49715 358 aaPredicted RBP25.2■■□□□ 1.62
RPRD1A-209ENST00000590898 PKD2Q13563 968 aa25.19■■□□□ 1.62
RPRD1A-209ENST00000590898 FBXO31Q5XUX0 539 aaPredicted RBP25.15■■□□□ 1.62
RPRD1A-209ENST00000590898 PREX1Q8TCU6 1659 aa25.14■■□□□ 1.62
RPRD1A-209ENST00000590898 SPATA31D1Q6ZQQ2 1576 aa25.13■■□□□ 1.61
RPRD1A-209ENST00000590898 ERVK-7P63135 1459 aa25.12■■□□□ 1.61
RPRD1A-209ENST00000590898 NOS1P29475 1434 aa25.12■■□□□ 1.61
RPRD1A-209ENST00000590898 PLPPR3Q6T4P5 718 aa25.1■■□□□ 1.61
RPRD1A-209ENST00000590898 PTPRTO14522 1441 aa25.1■■□□□ 1.61
RPRD1A-209ENST00000590898 SPHKAPQ2M3C7 1700 aa25.08■■□□□ 1.61
RPRD1A-209ENST00000590898 TNRQ92752 1358 aa25.08■■□□□ 1.6
RPRD1A-209ENST00000590898 SLC52A1Q9NWF4 448 aa25.06■■□□□ 1.6
RPRD1A-209ENST00000590898 DHX57Q6P158 1386 aaKnown RBP25.06■■□□□ 1.6
RPRD1A-209ENST00000590898 FOXD1Q16676 465 aa25.06■■□□□ 1.6
RPRD1A-209ENST00000590898 PLA2R1Q13018 1463 aa25.03■■□□□ 1.6
RPRD1A-209ENST00000590898 SYNMO15061 1565 aa25.03■■□□□ 1.6
RPRD1A-209ENST00000590898 TRPM2O94759 1503 aa25.02■■□□□ 1.6
RPRD1A-209ENST00000590898 NLRP1Q9C000 1473 aa25.01■■□□□ 1.59
RPRD1A-209ENST00000590898 ANKRD30BQ9BXX2 1392 aa25.01■■□□□ 1.59
RPRD1A-209ENST00000590898 PIK3C2BO00750 1634 aa24.99■■□□□ 1.59
RPRD1A-209ENST00000590898 IDI1Q13907 227 aa24.99■■□□□ 1.59
RPRD1A-209ENST00000590898 UHRF1BP1Q6BDS2 1440 aa24.97■■□□□ 1.59
RPRD1A-209ENST00000590898 MYO3AQ8NEV4 1616 aa24.97■■□□□ 1.59
RPRD1A-209ENST00000590898 CCDC144AA2RUR9 1427 aa24.94■■□□□ 1.58
RPRD1A-209ENST00000590898 A2ML1A8K2U0 1454 aa24.94■■□□□ 1.58
RPRD1A-209ENST00000590898 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
RPRD1A-209ENST00000590898 KDM5AP29375 1690 aaKnown RBP24.94■■□□□ 1.58
RPRD1A-209ENST00000590898 ZNF142P52746 1687 aaPredicted RBP24.93■■□□□ 1.58
RPRD1A-209ENST00000590898 CLTCL1P53675 1640 aa24.92■■□□□ 1.58
RPRD1A-209ENST00000590898 UGGT1Q9NYU2 1555 aa24.92■■□□□ 1.58
RPRD1A-209ENST00000590898 CEP170BQ9Y4F5 1589 aaPredicted RBP24.92■■□□□ 1.58
RPRD1A-209ENST00000590898 KIF1BO60333 1816 aa24.91■■□□□ 1.58
RPRD1A-209ENST00000590898 CLSPNQ9HAW4 1339 aa24.9■■□□□ 1.58
RPRD1A-209ENST00000590898 UBR1Q8IWV7 1749 aa24.88■■□□□ 1.57
RPRD1A-209ENST00000590898 THEMISQ8N1K5 641 aaPredicted RBP24.88■■□□□ 1.57
RPRD1A-209ENST00000590898 STAG3Q9UJ98 1225 aa24.88■■□□□ 1.57
RPRD1A-209ENST00000590898 TMEM131LA2VDJ0 1609 aa24.87■■□□□ 1.57
RPRD1A-209ENST00000590898 LMTK3Q96Q04 1460 aa24.86■■□□□ 1.57
RPRD1A-209ENST00000590898 ADGRB3O60242 1522 aa24.86■■□□□ 1.57
RPRD1A-209ENST00000590898 NEURL4Q96JN8 1562 aa24.85■■□□□ 1.57
RPRD1A-209ENST00000590898 MYO5BQ9ULV0 1848 aa24.84■■□□□ 1.57
RPRD1A-209ENST00000590898 CCER1Q8TC90 406 aaPredicted RBP24.84■■□□□ 1.57
RPRD1A-209ENST00000590898 CHGAP10645 457 aaKnown RBP24.82■■□□□ 1.56
RPRD1A-209ENST00000590898 SPATA31E1Q6ZUB1 1445 aa24.81■■□□□ 1.56
RPRD1A-209ENST00000590898 SIN3AQ96ST3 1273 aa24.78■■□□□ 1.56
RPRD1A-209ENST00000590898 TMEM2Q9UHN6 1383 aa24.78■■□□□ 1.56
RPRD1A-209ENST00000590898 HDGFP51858 240 aaKnown RBP24.77■■□□□ 1.56
RPRD1A-209ENST00000590898 SLIT1O75093 1534 aa24.77■■□□□ 1.56
RPRD1A-209ENST00000590898 RPGRIP1LQ68CZ1 1315 aa24.77■■□□□ 1.56
RPRD1A-209ENST00000590898 ARHGAP23Q9P227 1491 aa24.76■■□□□ 1.55
RPRD1A-209ENST00000590898 ZNF326Q5BKZ1 582 aaKnown RBP24.75■■□□□ 1.55
RPRD1A-209ENST00000590898 RGL3Q3MIN7 710 aa24.74■■□□□ 1.55
RPRD1A-209ENST00000590898 HSPA2P54652 639 aa24.73■■□□□ 1.55
RPRD1A-209ENST00000590898 NEUROD1Q13562 356 aa24.73■■□□□ 1.55
RPRD1A-209ENST00000590898 ANKLE2Q86XL3 938 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms