RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 NISCHQ9Y2I1 1504 aa40.51■■■■■ 4.08
RPRD1A-209ENST00000590898 CCDC180Q9P1Z9 1646 aa35.82■■■■□ 3.32
RPRD1A-209ENST00000590898 ABCC9O60706 1549 aa34.49■■■■□ 3.11
RPRD1A-209ENST00000590898 ZCCHC6Q5VYS8 1495 aaKnown RBP33.83■■■■□ 3.01
RPRD1A-209ENST00000590898 DCAF8L2P0C7V8 631 aa33.62■■■□□ 2.97
RPRD1A-209ENST00000590898 DCAF1Q9Y4B6 1507 aa33.59■■■□□ 2.97
RPRD1A-209ENST00000590898 NACADO15069 1562 aa33.57■■■□□ 2.96
RPRD1A-209ENST00000590898 MYO15BQ96JP2 1530 aa33.57■■■□□ 2.96
RPRD1A-209ENST00000590898 RB1CC1Q8TDY2 1594 aa33.46■■■□□ 2.95
RPRD1A-209ENST00000590898 UNC13AQ9UPW8 1703 aa32.71■■■□□ 2.83
RPRD1A-209ENST00000590898 SCRIBQ14160 1630 aa32.63■■■□□ 2.81
RPRD1A-209ENST00000590898 BICRAQ9NZM4 1560 aa32.41■■■□□ 2.78
RPRD1A-209ENST00000590898 PABPN1Q86U42 306 aaKnown RBP eCLIP32.33■■■□□ 2.77
RPRD1A-209ENST00000590898 SHROOM4Q9ULL8 1493 aa32.2■■■□□ 2.75
RPRD1A-209ENST00000590898 EIF4G1Q04637 1599 aaKnown RBP31.52■■■□□ 2.64
RPRD1A-209ENST00000590898 CECR2Q9BXF3 1484 aa31.47■■■□□ 2.63
RPRD1A-209ENST00000590898 BAZ1AQ9NRL2 1556 aaPredicted RBP31.37■■■□□ 2.61
RPRD1A-209ENST00000590898 SMARCA4P51532 1647 aa31.31■■■□□ 2.6
RPRD1A-209ENST00000590898 CC2D2AQ9P2K1 1620 aa31.26■■■□□ 2.6
RPRD1A-209ENST00000590898 DNAJC5BQ9UF47 199 aa31.25■■■□□ 2.59
RPRD1A-209ENST00000590898 MROH2BQ7Z745 1585 aa31.19■■■□□ 2.58
RPRD1A-209ENST00000590898 RSF1Q96T23 1441 aaPredicted RBP31.05■■■□□ 2.56
RPRD1A-209ENST00000590898 PEG3Q9GZU2 1588 aa31.04■■■□□ 2.56
RPRD1A-209ENST00000590898 SMARCA2P51531 1590 aa31.04■■■□□ 2.56
RPRD1A-209ENST00000590898 ATAD2BQ9ULI0 1458 aa31.03■■■□□ 2.56
RPRD1A-209ENST00000590898 NCAPD3P42695 1498 aa30.97■■■□□ 2.55
RPRD1A-209ENST00000590898 WIZO95785 1651 aa30.89■■■□□ 2.53
RPRD1A-209ENST00000590898 HMGXB3Q12766 1538 aa30.84■■■□□ 2.53
RPRD1A-209ENST00000590898 BAZ1BQ9UIG0 1483 aaKnown RBP30.78■■■□□ 2.52
RPRD1A-209ENST00000590898 TOP2AP11388 1531 aaKnown RBP30.6■■■□□ 2.49
RPRD1A-209ENST00000590898 SUPT5HO00267 1087 aaKnown RBP30.6■■■□□ 2.49
RPRD1A-209ENST00000590898 CCDC88BA6NC98 1476 aa30.25■■■□□ 2.43
RPRD1A-209ENST00000590898 CADPSQ9ULU8 1353 aa30.09■■■□□ 2.41
RPRD1A-209ENST00000590898 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
RPRD1A-209ENST00000590898 CFTRP13569 1480 aa30.01■■■□□ 2.39
RPRD1A-209ENST00000590898 NESP48681 1621 aa30■■■□□ 2.39
RPRD1A-209ENST00000590898 PDS5BQ9NTI5 1447 aa29.86■■■□□ 2.37
RPRD1A-209ENST00000590898 PRDM2Q13029 1718 aa29.84■■■□□ 2.37
RPRD1A-209ENST00000590898 ERCC6Q03468 1493 aa29.71■■■□□ 2.35
RPRD1A-209ENST00000590898 FANCD2Q9BXW9 1451 aa29.7■■■□□ 2.35
RPRD1A-209ENST00000590898 KIF21AQ7Z4S6 1674 aa29.68■■■□□ 2.34
RPRD1A-209ENST00000590898 CEP164Q9UPV0 1460 aa29.62■■■□□ 2.33
RPRD1A-209ENST00000590898 MRC2Q9UBG0 1479 aa29.47■■■□□ 2.31
RPRD1A-209ENST00000590898 THOC2Q8NI27 1593 aaKnown RBP29.45■■■□□ 2.31
RPRD1A-209ENST00000590898 ABCC8Q09428 1581 aa29.39■■■□□ 2.3
RPRD1A-209ENST00000590898 WDR62O43379 1518 aa29.37■■■□□ 2.29
RPRD1A-209ENST00000590898 URB2Q14146 1524 aaKnown RBP29.36■■■□□ 2.29
RPRD1A-209ENST00000590898 DNMBPQ6XZF7 1577 aa29.3■■■□□ 2.28
RPRD1A-209ENST00000590898 TOPBP1Q92547 1522 aa29.29■■■□□ 2.28
RPRD1A-209ENST00000590898 CUX2O14529 1486 aa29.26■■■□□ 2.27
RPRD1A-209ENST00000590898 WRNQ14191 1432 aaPredicted RBP eCLIP29.25■■■□□ 2.27
RPRD1A-209ENST00000590898 CUX1P39880 1505 aa29.23■■■□□ 2.27
RPRD1A-209ENST00000590898 TOP2BQ02880 1626 aa29.15■■■□□ 2.26
RPRD1A-209ENST00000590898 BIVM-ERCC5R4GMW8 1640 aa29.14■■■□□ 2.26
RPRD1A-209ENST00000590898 SYNJ1O43426 1573 aa29.11■■■□□ 2.25
RPRD1A-209ENST00000590898 POLA1P09884 1462 aaPredicted RBP29.07■■■□□ 2.24
RPRD1A-209ENST00000590898 FGD5Q6ZNL6 1462 aa29.06■■■□□ 2.24
RPRD1A-209ENST00000590898 IFT140Q96RY7 1462 aa29■■■□□ 2.23
RPRD1A-209ENST00000590898 SOGA1O94964 1423 aa28.98■■■□□ 2.23
RPRD1A-209ENST00000590898 TARBP1Q13395 1621 aaKnown RBP28.94■■■□□ 2.22
RPRD1A-209ENST00000590898 TRIM41Q8WV44 630 aa28.92■■■□□ 2.22
RPRD1A-209ENST00000590898 RAD54L2Q9Y4B4 1467 aa28.91■■■□□ 2.22
RPRD1A-209ENST00000590898 CHIC1Q5VXU3 224 aa28.88■■■□□ 2.21
RPRD1A-209ENST00000590898 ABCA10Q8WWZ4 1543 aa28.84■■■□□ 2.21
RPRD1A-209ENST00000590898 WDR97A6NE52 1622 aa28.81■■■□□ 2.2
RPRD1A-209ENST00000590898 ZNF608Q9ULD9 1512 aaPredicted RBP28.78■■■□□ 2.2
RPRD1A-209ENST00000590898 TDRD9Q8NDG6 1382 aaKnown RBP28.73■■■□□ 2.19
RPRD1A-209ENST00000590898 AQRO60306 1485 aaKnown RBP eCLIP28.7■■■□□ 2.19
RPRD1A-209ENST00000590898 EIF4G3O43432 1585 aaKnown RBP28.69■■■□□ 2.18
RPRD1A-209ENST00000590898 ABCA5Q8WWZ7 1642 aa28.66■■■□□ 2.18
RPRD1A-209ENST00000590898 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
RPRD1A-209ENST00000590898 KIF27Q86VH2 1401 aa28.62■■■□□ 2.17
RPRD1A-209ENST00000590898 GRIN2BQ13224 1484 aa28.58■■■□□ 2.17
RPRD1A-209ENST00000590898 PBRM1Q86U86 1689 aa28.54■■■□□ 2.16
RPRD1A-209ENST00000590898 ERICH3Q5RHP9 1530 aa28.51■■■□□ 2.16
RPRD1A-209ENST00000590898 MAGI1Q96QZ7 1491 aaPredicted RBP28.47■■■□□ 2.15
RPRD1A-209ENST00000590898 RUSC2Q8N2Y8 1516 aa28.46■■■□□ 2.15
RPRD1A-209ENST00000590898 IGF1RP08069 1367 aa28.45■■■□□ 2.15
RPRD1A-209ENST00000590898 EEA1Q15075 1411 aa28.43■■■□□ 2.14
RPRD1A-209ENST00000590898 SNAPC4Q5SXM2 1469 aa28.43■■■□□ 2.14
RPRD1A-209ENST00000590898 FHAD1B1AJZ9 1412 aa28.34■■■□□ 2.13
RPRD1A-209ENST00000590898 CUL7Q14999 1698 aa28.34■■■□□ 2.13
RPRD1A-209ENST00000590898 SYNJ2O15056 1496 aa28.33■■■□□ 2.13
RPRD1A-209ENST00000590898 ADAMTS12P58397 1594 aa28.33■■■□□ 2.13
RPRD1A-209ENST00000590898 CSRNP3Q8WYN3 585 aa28.32■■■□□ 2.12
RPRD1A-209ENST00000590898 CHMP7Q8WUX9 453 aaPredicted RBP28.3■■■□□ 2.12
RPRD1A-209ENST00000590898 CARMIL1Q5VZK9 1371 aa28.29■■■□□ 2.12
RPRD1A-209ENST00000590898 FBLN2P98095 1184 aa28.26■■■□□ 2.11
RPRD1A-209ENST00000590898 CHD1O14646 1710 aa28.25■■■□□ 2.11
RPRD1A-209ENST00000590898 FAM9AQ8IZU1 332 aaPredicted RBP28.24■■■□□ 2.11
RPRD1A-209ENST00000590898 GRIN2AQ12879 1464 aa28.2■■■□□ 2.11
RPRD1A-209ENST00000590898 PRXQ9BXM0 1461 aa28.2■■■□□ 2.1
RPRD1A-209ENST00000590898 OSCARQ8IYS5 282 aa28.18■■■□□ 2.1
RPRD1A-209ENST00000590898 RAPGEF2Q9Y4G8 1499 aa28.17■■■□□ 2.1
RPRD1A-209ENST00000590898 NUP160Q12769 1436 aa28.07■■■□□ 2.08
RPRD1A-209ENST00000590898 KIF21BO75037 1637 aa28.06■■■□□ 2.08
RPRD1A-209ENST00000590898 CEP170Q5SW79 1584 aa28.02■■■□□ 2.08
RPRD1A-209ENST00000590898 CLASP1Q7Z460 1538 aa27.96■■■□□ 2.07
RPRD1A-209ENST00000590898 KIAA0586Q9BVV6 1533 aa27.94■■■□□ 2.06
RPRD1A-209ENST00000590898 GOLGA3Q08378 1498 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms