RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 SETD1BQ9UPS6 1966 aaKnown RBP27.88■■■□□ 2.05
CIRBP-227ENST00000590188 WASHC2CQ9Y4E1 1318 aa27.87■■■□□ 2.05
CIRBP-227ENST00000590188 KIF15Q9NS87 1388 aa27.86■■■□□ 2.05
CIRBP-227ENST00000590188 KDM5DQ9BY66 1539 aa27.86■■■□□ 2.05
CIRBP-227ENST00000590188 NPATQ14207 1427 aa27.85■■■□□ 2.05
CIRBP-227ENST00000590188 PTPRKQ15262 1439 aa27.85■■■□□ 2.05
CIRBP-227ENST00000590188 DUOX2Q9NRD8 1548 aa27.84■■■□□ 2.05
CIRBP-227ENST00000590188 EIF2AK4Q9P2K8 1649 aaKnown RBP27.81■■■□□ 2.04
CIRBP-227ENST00000590188 RNF17Q9BXT8 1623 aaKnown RBP27.81■■■□□ 2.04
CIRBP-227ENST00000590188 FBXO31Q5XUX0 539 aaPredicted RBP27.79■■■□□ 2.04
CIRBP-227ENST00000590188 ANKRD30AQ9BXX3 1397 aa27.78■■■□□ 2.04
CIRBP-227ENST00000590188 MYO3AQ8NEV4 1616 aa27.78■■■□□ 2.04
CIRBP-227ENST00000590188 FAM135AQ9P2D6 1515 aa27.77■■■□□ 2.04
CIRBP-227ENST00000590188 MROH1Q8NDA8 1641 aa27.76■■■□□ 2.03
CIRBP-227ENST00000590188 ERBINQ96RT1 1412 aa27.75■■■□□ 2.03
CIRBP-227ENST00000590188 ABCC3O15438 1527 aa27.74■■■□□ 2.03
CIRBP-227ENST00000590188 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.74■■■□□ 2.031e-19■□□□□ 10
CIRBP-227ENST00000590188 PZPP20742 1482 aa27.74■■■□□ 2.03
CIRBP-227ENST00000590188 STRCQ7RTU9 1775 aa27.73■■■□□ 2.03
CIRBP-227ENST00000590188 NCOA1Q15788 1441 aa27.72■■■□□ 2.03
CIRBP-227ENST00000590188 CEP152O94986 1710 aa27.71■■■□□ 2.03
CIRBP-227ENST00000590188 TNRQ92752 1358 aa27.71■■■□□ 2.03
CIRBP-227ENST00000590188 CEP170BQ9Y4F5 1589 aaPredicted RBP27.7■■■□□ 2.03
CIRBP-227ENST00000590188 CAMSAP1Q5T5Y3 1602 aa27.7■■■□□ 2.02
CIRBP-227ENST00000590188 ZC3H13Q5T200 1668 aaKnown RBP27.69■■■□□ 2.02
CIRBP-227ENST00000590188 ITGAEP38570 1179 aa27.69■■■□□ 2.02
CIRBP-227ENST00000590188 ADGRL2O95490 1459 aa27.69■■■□□ 2.02
CIRBP-227ENST00000590188 ZNF142P52746 1687 aaPredicted RBP27.68■■■□□ 2.02
CIRBP-227ENST00000590188 ILDR1Q86SU0 546 aaPredicted RBP27.66■■■□□ 2.02
CIRBP-227ENST00000590188 PRDM15P57071 1507 aaPredicted RBP27.66■■■□□ 2.02
CIRBP-227ENST00000590188 NCKAP5LQ9HCH0 1330 aa27.64■■■□□ 2.01
CIRBP-227ENST00000590188 A2ML1A8K2U0 1454 aa27.64■■■□□ 2.01
CIRBP-227ENST00000590188 DMRT2Q9Y5R5 561 aa27.63■■■□□ 2.01
CIRBP-227ENST00000590188 DEPDC5O75140 1603 aa27.61■■■□□ 2.01
CIRBP-227ENST00000590188 KANK1Q14678 1352 aa27.6■■■□□ 2.01
CIRBP-227ENST00000590188 ANKRD50Q9ULJ7 1429 aa27.58■■■□□ 2.01
CIRBP-227ENST00000590188 ERVK-7P63135 1459 aa27.58■■■□□ 2.01
CIRBP-227ENST00000590188 CFAP65Q6ZU64 1925 aaKnown RBP27.57■■■□□ 2
CIRBP-227ENST00000590188 SPATA31D1Q6ZQQ2 1576 aa27.56■■■□□ 2
CIRBP-227ENST00000590188 PTPRTO14522 1441 aa27.56■■■□□ 2
CIRBP-227ENST00000590188 PLA2R1Q13018 1463 aa27.54■■■□□ 2
CIRBP-227ENST00000590188 NLRP1Q9C000 1473 aa27.53■■■□□ 2
CIRBP-227ENST00000590188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.51■■□□□ 1.99
CIRBP-227ENST00000590188 UGGT1Q9NYU2 1555 aa27.51■■□□□ 1.99
CIRBP-227ENST00000590188 ROCK1Q13464 1354 aa27.5■■□□□ 1.99
CIRBP-227ENST00000590188 PKD2Q13563 968 aa27.5■■□□□ 1.99
CIRBP-227ENST00000590188 VWDEQ8N2E2 1590 aa27.5■■□□□ 1.99
CIRBP-227ENST00000590188 ARHGAP31Q2M1Z3 1444 aa27.5■■□□□ 1.99
CIRBP-227ENST00000590188 RRBP1Q9P2E9 1410 aaKnown RBP27.49■■□□□ 1.99
CIRBP-227ENST00000590188 CERKQ8TCT0 537 aa27.48■■□□□ 1.99
CIRBP-227ENST00000590188 LMTK2Q8IWU2 1503 aa27.47■■□□□ 1.99
CIRBP-227ENST00000590188 THEMISQ8N1K5 641 aaPredicted RBP27.46■■□□□ 1.99
CIRBP-227ENST00000590188 FBXO41Q8TF61 875 aa27.45■■□□□ 1.98
CIRBP-227ENST00000590188 EFCAB6Q5THR3 1501 aa27.42■■□□□ 1.98
CIRBP-227ENST00000590188 POLR1AO95602 1720 aaPredicted RBP27.41■■□□□ 1.98
CIRBP-227ENST00000590188 UNC13BO14795 1591 aa27.4■■□□□ 1.98
CIRBP-227ENST00000590188 ANKLE2Q86XL3 938 aa27.4■■□□□ 1.98
CIRBP-227ENST00000590188 ZNF335Q9H4Z2 1342 aaPredicted RBP27.4■■□□□ 1.98
CIRBP-227ENST00000590188 NEURL4Q96JN8 1562 aa27.39■■□□□ 1.98
CIRBP-227ENST00000590188 UBR1Q8IWV7 1749 aa27.37■■□□□ 1.97
CIRBP-227ENST00000590188 LTBP4Q8N2S1 1624 aa27.36■■□□□ 1.97
CIRBP-227ENST00000590188 SYNMO15061 1565 aa27.35■■□□□ 1.97
CIRBP-227ENST00000590188 PIK3C2BO00750 1634 aa27.35■■□□□ 1.97
CIRBP-227ENST00000590188 TET3O43151 1660 aa27.34■■□□□ 1.97
CIRBP-227ENST00000590188 STAG3Q9UJ98 1225 aa27.34■■□□□ 1.97
CIRBP-227ENST00000590188 NUP155O75694 1391 aa27.33■■□□□ 1.97
CIRBP-227ENST00000590188 NOS1P29475 1434 aa27.33■■□□□ 1.96
CIRBP-227ENST00000590188 IDI1Q13907 227 aa27.32■■□□□ 1.96
CIRBP-227ENST00000590188 NPHP4O75161 1426 aaPredicted RBP27.32■■□□□ 1.96
CIRBP-227ENST00000590188 GCC2Q8IWJ2 1684 aa27.3■■□□□ 1.96
CIRBP-227ENST00000590188 IQGAP3Q86VI3 1631 aa27.29■■□□□ 1.96
CIRBP-227ENST00000590188 RPRD2Q5VT52 1461 aaKnown RBP27.28■■□□□ 1.96
CIRBP-227ENST00000590188 NAIPQ13075 1403 aa27.26■■□□□ 1.95
CIRBP-227ENST00000590188 TXNDC2Q86VQ3 553 aa27.26■■□□□ 1.95
CIRBP-227ENST00000590188 E9PCH4 1651 aa27.26■■□□□ 1.95
CIRBP-227ENST00000590188 MED14O60244 1454 aa27.25■■□□□ 1.95
CIRBP-227ENST00000590188 IQGAP1P46940 1657 aa27.25■■□□□ 1.95
CIRBP-227ENST00000590188 LTKP29376 864 aa27.25■■□□□ 1.95
CIRBP-227ENST00000590188 SCAF11Q99590 1463 aaKnown RBP27.24■■□□□ 1.95
CIRBP-227ENST00000590188 ARHGAP23Q9P227 1491 aa27.24■■□□□ 1.95
CIRBP-227ENST00000590188 SLIT1O75093 1534 aa27.23■■□□□ 1.95
CIRBP-227ENST00000590188 SLC52A1Q9NWF4 448 aa27.22■■□□□ 1.95
CIRBP-227ENST00000590188 TMEM2Q9UHN6 1383 aa27.22■■□□□ 1.95
CIRBP-227ENST00000590188 ADGRB3O60242 1522 aa27.21■■□□□ 1.95
CIRBP-227ENST00000590188 EID1Q9Y6B2 187 aa27.21■■□□□ 1.95
CIRBP-227ENST00000590188 CHGAP10645 457 aaKnown RBP27.19■■□□□ 1.94
CIRBP-227ENST00000590188 HFM1A2PYH4 1435 aa27.17■■□□□ 1.94
CIRBP-227ENST00000590188 TRIM52Q96A61 297 aa27.16■■□□□ 1.94
CIRBP-227ENST00000590188 SENP3Q9H4L4 574 aaPredicted RBP27.16■■□□□ 1.94
CIRBP-227ENST00000590188 KDM5AP29375 1690 aaKnown RBP27.16■■□□□ 1.94
CIRBP-227ENST00000590188 IQSEC2Q5JU85 1478 aa27.13■■□□□ 1.93
CIRBP-227ENST00000590188 MYO5BQ9ULV0 1848 aa27.13■■□□□ 1.93
CIRBP-227ENST00000590188 CPS1P31327 1500 aa27.11■■□□□ 1.93
CIRBP-227ENST00000590188 TMEM131LA2VDJ0 1609 aa27.09■■□□□ 1.93
CIRBP-227ENST00000590188 UBAP1LF5GYI3 381 aa27.08■■□□□ 1.93
CIRBP-227ENST00000590188 BCANQ96GW7 911 aa27.08■■□□□ 1.93
CIRBP-227ENST00000590188 STRCP1A6NGW2 1772 aa27.07■■□□□ 1.92
CIRBP-227ENST00000590188 RIMS2Q9UQ26 1411 aa27.07■■□□□ 1.92
CIRBP-227ENST00000590188 NUTM2DQ5VT03 806 aaPredicted RBP27.06■■□□□ 1.92
CIRBP-227ENST00000590188 SLC26A8Q96RN1 970 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms