RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CD109Q6YHK3 1445 aa14.58□□□□□ -0.07
VPS25-203ENST00000589520 HSPA5P11021 654 aaKnown RBP14.58□□□□□ -0.08
VPS25-203ENST00000589520 DDX10Q13206 875 aaKnown RBP14.58□□□□□ -0.08
VPS25-203ENST00000589520 STAC3Q96MF2 364 aa14.58□□□□□ -0.08
VPS25-203ENST00000589520 CFAP74Q9C0B2 1584 aa14.58□□□□□ -0.08
VPS25-203ENST00000589520 IQGAP3Q86VI3 1631 aa14.58□□□□□ -0.08
VPS25-203ENST00000589520 NBPF8Q3BBV2 869 aa14.57□□□□□ -0.08
VPS25-203ENST00000589520 DHX29Q7Z478 1369 aaKnown RBP14.57□□□□□ -0.08
VPS25-203ENST00000589520 CCDC144AA2RUR9 1427 aa14.57□□□□□ -0.08
VPS25-203ENST00000589520 DIP2BQ9P265 1576 aa14.56□□□□□ -0.08
VPS25-203ENST00000589520 KANK1Q14678 1352 aa14.56□□□□□ -0.08
VPS25-203ENST00000589520 ZFYVE16Q7Z3T8 1539 aa14.56□□□□□ -0.08
VPS25-203ENST00000589520 CCER2I3L3R5 266 aa14.55□□□□□ -0.08
VPS25-203ENST00000589520 ANP32CO43423 234 aa14.55□□□□□ -0.08
VPS25-203ENST00000589520 FAM69CQ0P6D2 419 aa14.55□□□□□ -0.08
VPS25-203ENST00000589520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.55□□□□□ -0.087e-7■■□□□ 11.5
VPS25-203ENST00000589520 ZNF518AQ6AHZ1 1483 aa14.55□□□□□ -0.08
VPS25-203ENST00000589520 ARID4BQ4LE39 1312 aaPredicted RBP14.54□□□□□ -0.08
VPS25-203ENST00000589520 NEO1Q92859 1461 aa14.54□□□□□ -0.08
VPS25-203ENST00000589520 ATP7AQ04656 1500 aa14.54□□□□□ -0.08
VPS25-203ENST00000589520 INO80Q9ULG1 1556 aaPredicted RBP14.53□□□□□ -0.08
VPS25-203ENST00000589520 DISP3Q9P2K9 1392 aa14.52□□□□□ -0.08
VPS25-203ENST00000589520 SPATA31E1Q6ZUB1 1445 aa14.51□□□□□ -0.09
VPS25-203ENST00000589520 HIRIP3Q9BW71 556 aaPredicted RBP14.51□□□□□ -0.09
VPS25-203ENST00000589520 MYT1LQ9UL68 1186 aa14.51□□□□□ -0.09
VPS25-203ENST00000589520 EIF2AK4Q9P2K8 1649 aaKnown RBP14.51□□□□□ -0.09
VPS25-203ENST00000589520 MLH3Q9UHC1 1453 aa14.5□□□□□ -0.09
VPS25-203ENST00000589520 RALGAPBQ86X10 1494 aa14.49□□□□□ -0.09
VPS25-203ENST00000589520 GLI2P10070 1586 aa14.48□□□□□ -0.09
VPS25-203ENST00000589520 DCAF11Q8TEB1 546 aa14.48□□□□□ -0.09
VPS25-203ENST00000589520 PLA2R1Q13018 1463 aa14.48□□□□□ -0.09
VPS25-203ENST00000589520 POGZQ7Z3K3 1410 aa14.48□□□□□ -0.09
VPS25-203ENST00000589520 WASHC2AQ641Q2 1341 aa14.47□□□□□ -0.09
VPS25-203ENST00000589520 DEPDC5O75140 1603 aa14.47□□□□□ -0.09
VPS25-203ENST00000589520 PTPRTO14522 1441 aa14.47□□□□□ -0.09
VPS25-203ENST00000589520 KIF3BO15066 747 aa14.46□□□□□ -0.09
VPS25-203ENST00000589520 KDM5CP41229 1560 aa14.46□□□□□ -0.09
VPS25-203ENST00000589520 VWDEQ8N2E2 1590 aa14.46□□□□□ -0.09
VPS25-203ENST00000589520 CCDC7Q96M83 1385 aa14.46□□□□□ -0.1
VPS25-203ENST00000589520 CARD11Q9BXL7 1154 aa14.45□□□□□ -0.1
VPS25-203ENST00000589520 USP47Q96K76 1375 aa14.45□□□□□ -0.1
VPS25-203ENST00000589520 A2MP01023 1474 aa14.44□□□□□ -0.1
VPS25-203ENST00000589520 YTHDC1Q96MU7 727 aaKnown RBP14.44□□□□□ -0.1
VPS25-203ENST00000589520 ROCK2O75116 1388 aaKnown RBP14.43□□□□□ -0.1
VPS25-203ENST00000589520 NEURL4Q96JN8 1562 aa14.43□□□□□ -0.1
VPS25-203ENST00000589520 PRDM15P57071 1507 aaPredicted RBP14.42□□□□□ -0.1
VPS25-203ENST00000589520 LMTK2Q8IWU2 1503 aa14.42□□□□□ -0.1
VPS25-203ENST00000589520 ZNF326Q5BKZ1 582 aaKnown RBP14.42□□□□□ -0.1
VPS25-203ENST00000589520 KDM2AQ9Y2K7 1162 aa14.42□□□□□ -0.1
VPS25-203ENST00000589520 TET3O43151 1660 aa14.42□□□□□ -0.1
VPS25-203ENST00000589520 PRAG1Q86YV5 1406 aa14.41□□□□□ -0.1
VPS25-203ENST00000589520 CNTLNQ9NXG0 1405 aa14.41□□□□□ -0.1
VPS25-203ENST00000589520 TRPM2O94759 1503 aa14.41□□□□□ -0.1
VPS25-203ENST00000589520 GPRASP1Q5JY77 1395 aa14.41□□□□□ -0.1
VPS25-203ENST00000589520 KIDINS220Q9ULH0 1771 aa14.41□□□□□ -0.1
VPS25-203ENST00000589520 KIF7Q2M1P5 1343 aa14.39□□□□□ -0.11
VPS25-203ENST00000589520 MAP3K4Q9Y6R4 1608 aa14.38□□□□□ -0.11
VPS25-203ENST00000589520 RGL3Q3MIN7 710 aa14.38□□□□□ -0.11
VPS25-203ENST00000589520 SPATA31D1Q6ZQQ2 1576 aa14.38□□□□□ -0.11
VPS25-203ENST00000589520 SLC24A1O60721 1099 aa14.37□□□□□ -0.11
VPS25-203ENST00000589520 BCORL1Q5H9F3 1711 aa14.37□□□□□ -0.11
VPS25-203ENST00000589520 RNF17Q9BXT8 1623 aaKnown RBP14.37□□□□□ -0.11
VPS25-203ENST00000589520 E9PCH4 1651 aa14.36□□□□□ -0.11
VPS25-203ENST00000589520 PPRC1Q5VV67 1664 aaKnown RBP14.36□□□□□ -0.11
VPS25-203ENST00000589520 C11orf95C9JLR9 678 aaPredicted RBP14.36□□□□□ -0.11
VPS25-203ENST00000589520 LAMC1P11047 1609 aa14.35□□□□□ -0.11
VPS25-203ENST00000589520 POLR1AO95602 1720 aaPredicted RBP14.35□□□□□ -0.11
VPS25-203ENST00000589520 PPP6R1Q9UPN7 881 aa14.34□□□□□ -0.11
VPS25-203ENST00000589520 MROH1Q8NDA8 1641 aa14.33□□□□□ -0.11
VPS25-203ENST00000589520 SCAF1Q9H7N4 1312 aaKnown RBP14.33□□□□□ -0.12
VPS25-203ENST00000589520 SPHKAPQ2M3C7 1700 aa14.32□□□□□ -0.12
VPS25-203ENST00000589520 EFCAB6Q5THR3 1501 aa14.32□□□□□ -0.12
VPS25-203ENST00000589520 ST20-MTHFSA0A0A6YYL1 179 aa14.32□□□□□ -0.12
VPS25-203ENST00000589520 RAPGEF3O95398 923 aa14.32□□□□□ -0.12
VPS25-203ENST00000589520 TRPM1Q7Z4N2 1603 aa14.32□□□□□ -0.12
VPS25-203ENST00000589520 PRKRIP1Q9H875 184 aaPredicted RBP14.31□□□□□ -0.12
VPS25-203ENST00000589520 RPGRIP1LQ68CZ1 1315 aa14.31□□□□□ -0.12
VPS25-203ENST00000589520 WASHC2CQ9Y4E1 1318 aa14.31□□□□□ -0.12
VPS25-203ENST00000589520 KTN1Q86UP2 1357 aaKnown RBP14.3□□□□□ -0.12
VPS25-203ENST00000589520 ARHGAP31Q2M1Z3 1444 aa14.3□□□□□ -0.12
VPS25-203ENST00000589520 FRMPD1Q5SYB0 1578 aa14.3□□□□□ -0.12
VPS25-203ENST00000589520 GGT6Q6P531 493 aa14.29□□□□□ -0.12
VPS25-203ENST00000589520 GTF3C3Q9Y5Q9 886 aa14.29□□□□□ -0.12
VPS25-203ENST00000589520 CEP152O94986 1710 aa14.29□□□□□ -0.12
VPS25-203ENST00000589520 CDCA8Q53HL2 280 aa14.28□□□□□ -0.12
VPS25-203ENST00000589520 ZMYM4Q5VZL5 1548 aa14.28□□□□□ -0.12
VPS25-203ENST00000589520 ABCA6Q8N139 1617 aa14.27□□□□□ -0.12
VPS25-203ENST00000589520 MYOM2P54296 1465 aa14.27□□□□□ -0.12
VPS25-203ENST00000589520 TMF1P82094 1093 aa14.27□□□□□ -0.13
VPS25-203ENST00000589520 NBPF1Q3BBV0 1214 aa14.27□□□□□ -0.13
VPS25-203ENST00000589520 RICTORQ6R327 1708 aa14.27□□□□□ -0.13
VPS25-203ENST00000589520 CLTCL1P53675 1640 aa14.26□□□□□ -0.13
VPS25-203ENST00000589520 DIP2CQ9Y2E4 1556 aa14.26□□□□□ -0.13
VPS25-203ENST00000589520 SLC52A1Q9NWF4 448 aa14.25□□□□□ -0.13
VPS25-203ENST00000589520 ABCC3O15438 1527 aa14.25□□□□□ -0.13
VPS25-203ENST00000589520 NPATQ14207 1427 aa14.24□□□□□ -0.13
VPS25-203ENST00000589520 EIF3AQ14152 1382 aaKnown RBP14.24□□□□□ -0.13
VPS25-203ENST00000589520 COL17A1Q9UMD9 1497 aaPredicted RBP14.24□□□□□ -0.13
VPS25-203ENST00000589520 NOS1P29475 1434 aa14.24□□□□□ -0.13
VPS25-203ENST00000589520 REREQ9P2R6 1566 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms