RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 AEBP2Q6ZN18 517 aaPredicted RBP32.08■■■□□ 2.73
R3HDM4-204ENST00000589428 PTPRMP28827 1452 aa32.06■■■□□ 2.72
R3HDM4-204ENST00000589428 RNF17Q9BXT8 1623 aaKnown RBP32.06■■■□□ 2.72
R3HDM4-204ENST00000589428 CNTLNQ9NXG0 1405 aa32.03■■■□□ 2.72
R3HDM4-204ENST00000589428 ANKRD50Q9ULJ7 1429 aa32.03■■■□□ 2.72
R3HDM4-204ENST00000589428 PPP6R1Q9UPN7 881 aa32.02■■■□□ 2.72
R3HDM4-204ENST00000589428 FAM135AQ9P2D6 1515 aa32■■■□□ 2.71
R3HDM4-204ENST00000589428 CLTCQ00610 1675 aaKnown RBP31.97■■■□□ 2.71
R3HDM4-204ENST00000589428 KDM5DQ9BY66 1539 aa31.97■■■□□ 2.71
R3HDM4-204ENST00000589428 MROH1Q8NDA8 1641 aa31.95■■■□□ 2.71
R3HDM4-204ENST00000589428 MROH2AA6NES4 1674 aa31.95■■■□□ 2.71
R3HDM4-204ENST00000589428 PRDM15P57071 1507 aaPredicted RBP31.95■■■□□ 2.7
R3HDM4-204ENST00000589428 DEPDC5O75140 1603 aa31.95■■■□□ 2.7
R3HDM4-204ENST00000589428 PLPPR3Q6T4P5 718 aa31.93■■■□□ 2.7
R3HDM4-204ENST00000589428 WASHC2CQ9Y4E1 1318 aa31.92■■■□□ 2.7
R3HDM4-204ENST00000589428 ZC3H13Q5T200 1668 aaKnown RBP31.91■■■□□ 2.7
R3HDM4-204ENST00000589428 GCC2Q8IWJ2 1684 aa31.91■■■□□ 2.7
R3HDM4-204ENST00000589428 C3P01024 1663 aa31.9■■■□□ 2.7
R3HDM4-204ENST00000589428 KANK1Q14678 1352 aa31.89■■■□□ 2.7
R3HDM4-204ENST00000589428 HFM1A2PYH4 1435 aa31.89■■■□□ 2.7
R3HDM4-204ENST00000589428 NAIPQ13075 1403 aa31.88■■■□□ 2.69
R3HDM4-204ENST00000589428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.88■■■□□ 2.69
R3HDM4-204ENST00000589428 ABCC3O15438 1527 aa31.87■■■□□ 2.69
R3HDM4-204ENST00000589428 ZMYM3Q14202 1370 aa31.86■■■□□ 2.69
R3HDM4-204ENST00000589428 CEBPAP49715 358 aaPredicted RBP31.85■■■□□ 2.69
R3HDM4-204ENST00000589428 CEP152O94986 1710 aa31.84■■■□□ 2.69
R3HDM4-204ENST00000589428 UNC13BO14795 1591 aa31.84■■■□□ 2.69
R3HDM4-204ENST00000589428 VWDEQ8N2E2 1590 aa31.8■■■□□ 2.68
R3HDM4-204ENST00000589428 CAMSAP1Q5T5Y3 1602 aa31.79■■■□□ 2.68
R3HDM4-204ENST00000589428 PZPP20742 1482 aa31.76■■■□□ 2.67
R3HDM4-204ENST00000589428 LMTK2Q8IWU2 1503 aa31.76■■■□□ 2.67
R3HDM4-204ENST00000589428 NPATQ14207 1427 aa31.74■■■□□ 2.67
R3HDM4-204ENST00000589428 NUP155O75694 1391 aa31.71■■■□□ 2.67
R3HDM4-204ENST00000589428 IQGAP3Q86VI3 1631 aa31.7■■■□□ 2.67
R3HDM4-204ENST00000589428 ARHGAP31Q2M1Z3 1444 aa31.68■■■□□ 2.66
R3HDM4-204ENST00000589428 EFCAB6Q5THR3 1501 aa31.68■■■□□ 2.66
R3HDM4-204ENST00000589428 PREX1Q8TCU6 1659 aa31.68■■■□□ 2.66
R3HDM4-204ENST00000589428 TET3O43151 1660 aa31.67■■■□□ 2.66
R3HDM4-204ENST00000589428 SETD5Q9C0A6 1442 aa31.66■■■□□ 2.66
R3HDM4-204ENST00000589428 SETD1BQ9UPS6 1966 aaKnown RBP31.66■■■□□ 2.66
R3HDM4-204ENST00000589428 UHRF1BP1Q6BDS2 1440 aa31.64■■■□□ 2.66
R3HDM4-204ENST00000589428 FBXO31Q5XUX0 539 aaPredicted RBP31.63■■■□□ 2.65
R3HDM4-204ENST00000589428 ERVK-7P63135 1459 aa31.62■■■□□ 2.65
R3HDM4-204ENST00000589428 TNRQ92752 1358 aa31.62■■■□□ 2.65
R3HDM4-204ENST00000589428 SPATA31D1Q6ZQQ2 1576 aa31.61■■■□□ 2.65
R3HDM4-204ENST00000589428 TRIM52Q96A61 297 aa31.61■■■□□ 2.65
R3HDM4-204ENST00000589428 MYO3AQ8NEV4 1616 aa31.6■■■□□ 2.65
R3HDM4-204ENST00000589428 LMTK3Q96Q04 1460 aa31.6■■■□□ 2.65
R3HDM4-204ENST00000589428 RAB3GAP2Q9H2M9 1393 aa31.6■■■□□ 2.65
R3HDM4-204ENST00000589428 RPRD2Q5VT52 1461 aaKnown RBP31.59■■■□□ 2.65
R3HDM4-204ENST00000589428 CFAP65Q6ZU64 1925 aaKnown RBP31.56■■■□□ 2.64
R3HDM4-204ENST00000589428 ACIN1Q9UKV3 1341 aaKnown RBP31.55■■■□□ 2.64
R3HDM4-204ENST00000589428 E9PCH4 1651 aa31.53■■■□□ 2.64
R3HDM4-204ENST00000589428 CEP170BQ9Y4F5 1589 aaPredicted RBP31.51■■■□□ 2.64
R3HDM4-204ENST00000589428 ZNF142P52746 1687 aaPredicted RBP31.51■■■□□ 2.64
R3HDM4-204ENST00000589428 NLRP1Q9C000 1473 aa31.5■■■□□ 2.63
R3HDM4-204ENST00000589428 NOS1P29475 1434 aa31.48■■■□□ 2.63
R3HDM4-204ENST00000589428 A2ML1A8K2U0 1454 aa31.47■■■□□ 2.63
R3HDM4-204ENST00000589428 SLC4A1APQ9BWU0 796 aaKnown RBP31.46■■■□□ 2.63
R3HDM4-204ENST00000589428 SYNMO15061 1565 aa31.44■■■□□ 2.62
R3HDM4-204ENST00000589428 HRCP23327 699 aa31.44■■■□□ 2.62
R3HDM4-204ENST00000589428 HSPA2P54652 639 aa31.44■■■□□ 2.62
R3HDM4-204ENST00000589428 PKD2Q13563 968 aa31.39■■■□□ 2.62
R3HDM4-204ENST00000589428 UGGT1Q9NYU2 1555 aa31.39■■■□□ 2.62
R3HDM4-204ENST00000589428 SPHKAPQ2M3C7 1700 aa31.37■■■□□ 2.61
R3HDM4-204ENST00000589428 SLC52A1Q9NWF4 448 aa31.36■■■□□ 2.61
R3HDM4-204ENST00000589428 MPHOSPH9Q99550 1183 aa31.35■■■□□ 2.61
R3HDM4-204ENST00000589428 PIK3C2BO00750 1634 aa31.35■■■□□ 2.61
R3HDM4-204ENST00000589428 PTPRTO14522 1441 aa31.32■■■□□ 2.6
R3HDM4-204ENST00000589428 IDI1Q13907 227 aa31.32■■■□□ 2.6
R3HDM4-204ENST00000589428 UBR1Q8IWV7 1749 aa31.31■■■□□ 2.6
R3HDM4-204ENST00000589428 THEMISQ8N1K5 641 aaPredicted RBP31.3■■■□□ 2.6
R3HDM4-204ENST00000589428 STAG3Q9UJ98 1225 aa31.3■■■□□ 2.6
R3HDM4-204ENST00000589428 DHX57Q6P158 1386 aaKnown RBP31.3■■■□□ 2.6
R3HDM4-204ENST00000589428 TRPM2O94759 1503 aa31.3■■■□□ 2.6
R3HDM4-204ENST00000589428 PLA2R1Q13018 1463 aa31.29■■■□□ 2.6
R3HDM4-204ENST00000589428 ADGRB3O60242 1522 aa31.28■■■□□ 2.6
R3HDM4-204ENST00000589428 KDM5AP29375 1690 aaKnown RBP31.28■■■□□ 2.6
R3HDM4-204ENST00000589428 FOXD1Q16676 465 aa31.25■■■□□ 2.59
R3HDM4-204ENST00000589428 CCER1Q8TC90 406 aaPredicted RBP31.23■■■□□ 2.59
R3HDM4-204ENST00000589428 STRCQ7RTU9 1775 aa31.21■■■□□ 2.59
R3HDM4-204ENST00000589428 CLTCL1P53675 1640 aa31.21■■■□□ 2.59
R3HDM4-204ENST00000589428 CHGAP10645 457 aaKnown RBP31.18■■■□□ 2.58
R3HDM4-204ENST00000589428 TMEM131LA2VDJ0 1609 aa31.18■■■□□ 2.58
R3HDM4-204ENST00000589428 POLR1AO95602 1720 aaPredicted RBP31.17■■■□□ 2.58
R3HDM4-204ENST00000589428 SLIT1O75093 1534 aa31.16■■■□□ 2.58
R3HDM4-204ENST00000589428 CCDC144AA2RUR9 1427 aa31.15■■■□□ 2.58
R3HDM4-204ENST00000589428 ANKLE2Q86XL3 938 aa31.15■■■□□ 2.58
R3HDM4-204ENST00000589428 ARHGAP23Q9P227 1491 aa31.15■■■□□ 2.58
R3HDM4-204ENST00000589428 NCKAP5LQ9HCH0 1330 aa31.15■■■□□ 2.58
R3HDM4-204ENST00000589428 TMEM2Q9UHN6 1383 aa31.14■■■□□ 2.58
R3HDM4-204ENST00000589428 MYO5BQ9ULV0 1848 aa31.14■■■□□ 2.58
R3HDM4-204ENST00000589428 DMRT2Q9Y5R5 561 aa31.12■■■□□ 2.57
R3HDM4-204ENST00000589428 KIF1BO60333 1816 aa31.11■■■□□ 2.57
R3HDM4-204ENST00000589428 SCAF11Q99590 1463 aaKnown RBP31.1■■■□□ 2.57
R3HDM4-204ENST00000589428 EID1Q9Y6B2 187 aa31.1■■■□□ 2.57
R3HDM4-204ENST00000589428 NEURL4Q96JN8 1562 aa31.08■■■□□ 2.57
R3HDM4-204ENST00000589428 TXNDC2Q86VQ3 553 aa31.07■■■□□ 2.56
R3HDM4-204ENST00000589428 RIMS2Q9UQ26 1411 aa31.05■■■□□ 2.56
R3HDM4-204ENST00000589428 ANKRD30BQ9BXX2 1392 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms