RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 POTEBQ6S5H4 581 aa8.48□□□□□ -1.05
HMGN1P30-201ENST00000589286 KCNK17Q96T54 332 aa8.48□□□□□ -1.05
HMGN1P30-201ENST00000589286 RBM26Q5T8P6 1007 aaKnown RBP8.47□□□□□ -1.05
HMGN1P30-201ENST00000589286 LMOD2Q6P5Q4 547 aa8.47□□□□□ -1.05
HMGN1P30-201ENST00000589286 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.47□□□□□ -1.05
HMGN1P30-201ENST00000589286 TSR1Q2NL82 804 aaKnown RBP8.46□□□□□ -1.06
HMGN1P30-201ENST00000589286 GPIHBP1Q8IV16 184 aa8.46□□□□□ -1.06
HMGN1P30-201ENST00000589286 CERKQ8TCT0 537 aa8.46□□□□□ -1.06
HMGN1P30-201ENST00000589286 PRIM1P49642 420 aaKnown RBP8.45□□□□□ -1.06
HMGN1P30-201ENST00000589286 PPP1R3GB7ZBB8 358 aa8.44□□□□□ -1.06
HMGN1P30-201ENST00000589286 AXIN2Q9Y2T1 843 aa8.44□□□□□ -1.06
HMGN1P30-201ENST00000589286 FCHSD2O94868 740 aa8.43□□□□□ -1.06
HMGN1P30-201ENST00000589286 PSEN2P49810 448 aa8.43□□□□□ -1.06
HMGN1P30-201ENST00000589286 CDAN1Q8IWY9 1227 aa8.43□□□□□ -1.06
HMGN1P30-201ENST00000589286 PCDH10Q9P2E7 1040 aa8.42□□□□□ -1.06
HMGN1P30-201ENST00000589286 CDHR5Q9HBB8 845 aa8.41□□□□□ -1.06
HMGN1P30-201ENST00000589286 COL9A1P20849 921 aa8.4□□□□□ -1.06
HMGN1P30-201ENST00000589286 LSM11P83369 360 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMGN1P30-201ENST00000589286 PTGDRQ13258 359 aa8.4□□□□□ -1.06
HMGN1P30-201ENST00000589286 POTEEQ6S8J3 1075 aa8.4□□□□□ -1.06
HMGN1P30-201ENST00000589286 HIC1Q14526 733 aa8.39□□□□□ -1.07
HMGN1P30-201ENST00000589286 ANKRD13DQ6ZTN6 518 aa8.39□□□□□ -1.07
HMGN1P30-201ENST00000589286 PRSS12P56730 875 aa8.38□□□□□ -1.07
HMGN1P30-201ENST00000589286 DMRTA1Q5VZB9 504 aa8.38□□□□□ -1.07
HMGN1P30-201ENST00000589286 SLC4A5Q9BY07 1137 aa8.38□□□□□ -1.07
HMGN1P30-201ENST00000589286 TK2O00142 265 aa8.37□□□□□ -1.07
HMGN1P30-201ENST00000589286 CDCA7LQ96GN5 454 aa8.37□□□□□ -1.07
HMGN1P30-201ENST00000589286 ZBED2Q9BTP6 218 aa8.37□□□□□ -1.07
HMGN1P30-201ENST00000589286 NPDC1Q9NQX5 325 aaPredicted RBP8.37□□□□□ -1.07
HMGN1P30-201ENST00000589286 RBM27Q9P2N5 1060 aaKnown RBP8.37□□□□□ -1.07
HMGN1P30-201ENST00000589286 GNPATO15228 680 aa8.36□□□□□ -1.07
HMGN1P30-201ENST00000589286 ONECUT3O60422 494 aaPredicted RBP8.36□□□□□ -1.07
HMGN1P30-201ENST00000589286 PACS2Q86VP3 889 aa8.36□□□□□ -1.07
HMGN1P30-201ENST00000589286 STAC3Q96MF2 364 aa8.36□□□□□ -1.07
HMGN1P30-201ENST00000589286 KRTAP3-3Q9BYR6 98 aa8.36□□□□□ -1.07
HMGN1P30-201ENST00000589286 KRTAP3-2Q9BYR7 98 aa8.36□□□□□ -1.07
HMGN1P30-201ENST00000589286 TRIM6-TRIM34B2RNG4 842 aa8.35□□□□□ -1.07
HMGN1P30-201ENST00000589286 ADGRD1Q6QNK2 874 aa8.35□□□□□ -1.07
HMGN1P30-201ENST00000589286 VPS9D1Q9Y2B5 631 aa8.35□□□□□ -1.07
HMGN1P30-201ENST00000589286 PROX2Q3B8N5 592 aa8.34□□□□□ -1.07
HMGN1P30-201ENST00000589286 ZC3H15Q8WU90 426 aaKnown RBP8.34□□□□□ -1.07
HMGN1P30-201ENST00000589286 GPR37O15354 613 aa8.33□□□□□ -1.08
HMGN1P30-201ENST00000589286 PADI6Q6TGC4 694 aa8.33□□□□□ -1.08
HMGN1P30-201ENST00000589286 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
HMGN1P30-201ENST00000589286 RABGEF1Q9UJ41 708 aa8.33□□□□□ -1.08
HMGN1P30-201ENST00000589286 NBPF26B4DH59 902 aa8.32□□□□□ -1.08
HMGN1P30-201ENST00000589286 KRI1Q8N9T8 703 aaKnown RBP8.32□□□□□ -1.08
HMGN1P30-201ENST00000589286 KIAA1468Q9P260 1216 aa8.32□□□□□ -1.08
HMGN1P30-201ENST00000589286 TSKSQ9UJT2 592 aa8.31□□□□□ -1.08
HMGN1P30-201ENST00000589286 ZMYND10O75800 440 aa8.3□□□□□ -1.08
HMGN1P30-201ENST00000589286 MAP2K5Q13163 448 aa8.29□□□□□ -1.08
HMGN1P30-201ENST00000589286 BARGINQ6ZT62 677 aa8.29□□□□□ -1.08
HMGN1P30-201ENST00000589286 TTC13Q8NBP0 860 aa8.29□□□□□ -1.08
HMGN1P30-201ENST00000589286 MINK1Q8N4C8 1332 aaPredicted RBP8.29□□□□□ -1.08
HMGN1P30-201ENST00000589286 OATP04181 439 aa8.28□□□□□ -1.08
HMGN1P30-201ENST00000589286 MRPL50Q8N5N7 158 aaKnown RBP8.28□□□□□ -1.08
HMGN1P30-201ENST00000589286 RBM46Q8TBY0 533 aaKnown RBP8.28□□□□□ -1.08
HMGN1P30-201ENST00000589286 TATDN2Q93075 761 aa8.28□□□□□ -1.08
HMGN1P30-201ENST00000589286 PNMA3Q9UL41 463 aa8.28□□□□□ -1.08
HMGN1P30-201ENST00000589286 GOLGA8CPA6NN73 597 aa8.27□□□□□ -1.09
HMGN1P30-201ENST00000589286 FECHP22830 423 aa8.27□□□□□ -1.09
HMGN1P30-201ENST00000589286 NUDT18Q6ZVK8 323 aa8.27□□□□□ -1.09
HMGN1P30-201ENST00000589286 LAPTM4BQ86VI4 370 aa8.27□□□□□ -1.09
HMGN1P30-201ENST00000589286 FAM198AQ9UFP1 575 aa8.27□□□□□ -1.09
HMGN1P30-201ENST00000589286 BHMG1C9JSJ3 638 aaPredicted RBP8.26□□□□□ -1.09
HMGN1P30-201ENST00000589286 HRO43593 1189 aa8.26□□□□□ -1.09
HMGN1P30-201ENST00000589286 TPRNQ4KMQ1 711 aa8.26□□□□□ -1.09
HMGN1P30-201ENST00000589286 ADGRG1Q9Y653 693 aa8.26□□□□□ -1.09
HMGN1P30-201ENST00000589286 IRF6O14896 467 aa8.25□□□□□ -1.09
HMGN1P30-201ENST00000589286 HDGFP51858 240 aaKnown RBP8.25□□□□□ -1.09
HMGN1P30-201ENST00000589286 FAM98CQ17RN3 349 aaKnown RBP8.25□□□□□ -1.09
HMGN1P30-201ENST00000589286 SEPT9Q9UHD8 586 aaPredicted RBP8.25□□□□□ -1.09
HMGN1P30-201ENST00000589286 SMAPO00193 183 aa8.24□□□□□ -1.09
HMGN1P30-201ENST00000589286 FAM161AQ3B820 660 aa8.23□□□□□ -1.09
HMGN1P30-201ENST00000589286 METTL3Q86U44 580 aaKnown RBP8.22□□□□□ -1.09
HMGN1P30-201ENST00000589286 CCDC102AQ96A19 550 aa8.22□□□□□ -1.09
HMGN1P30-201ENST00000589286 EYA1Q99502 592 aa8.22□□□□□ -1.09
HMGN1P30-201ENST00000589286 DNAJB2P25686 324 aa8.21□□□□□ -1.1
HMGN1P30-201ENST00000589286 SLC4A3P48751 1232 aa8.21□□□□□ -1.1
HMGN1P30-201ENST00000589286 PXYLP1Q8TE99 480 aa8.21□□□□□ -1.1
HMGN1P30-201ENST00000589286 AK7Q96M32 723 aa8.21□□□□□ -1.1
HMGN1P30-201ENST00000589286 MYT1LQ9UL68 1186 aa8.21□□□□□ -1.1
HMGN1P30-201ENST00000589286 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.2□□□□□ -1.1
HMGN1P30-201ENST00000589286 SPNS2Q8IVW8 549 aa8.2□□□□□ -1.1
HMGN1P30-201ENST00000589286 ANKK1Q8NFD2 765 aa8.2□□□□□ -1.1
HMGN1P30-201ENST00000589286 ZFRQ96KR1 1074 aaKnown RBP8.2□□□□□ -1.1
HMGN1P30-201ENST00000589286 SLC24A3Q9HC58 644 aa8.2□□□□□ -1.1
HMGN1P30-201ENST00000589286 RCCD1A6NED2 376 aa8.19□□□□□ -1.1
HMGN1P30-201ENST00000589286 C3orf80F5H4A9 247 aa8.19□□□□□ -1.1
HMGN1P30-201ENST00000589286 WNT2BQ93097 391 aa8.19□□□□□ -1.1
HMGN1P30-201ENST00000589286 LRCH3Q96II8 777 aa8.17□□□□□ -1.1
HMGN1P30-201ENST00000589286 SAMD7Q7Z3H4 446 aa8.16□□□□□ -1.1
HMGN1P30-201ENST00000589286 KCTD12Q96CX2 325 aaKnown RBP8.16□□□□□ -1.1
HMGN1P30-201ENST00000589286 TMEM134Q9H6X4 195 aa8.16□□□□□ -1.1
HMGN1P30-201ENST00000589286 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.16□□□□□ -1.1
HMGN1P30-201ENST00000589286 SWT1Q5T5J6 900 aaKnown RBP8.15□□□□□ -1.1
HMGN1P30-201ENST00000589286 RNF166Q96A37 237 aaPredicted RBP8.15□□□□□ -1.1
HMGN1P30-201ENST00000589286 TRIM66O15016 1216 aa8.14□□□□□ -1.11
HMGN1P30-201ENST00000589286 RNF40O75150 1001 aa8.14□□□□□ -1.11
HMGN1P30-201ENST00000589286 PRKCSHP14314 528 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms