RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 SPATA31E1Q6ZUB1 1445 aa21.32■■□□□ 1
MBD1-217ENST00000588937 TRAPPC8Q9Y2L5 1435 aa21.32■■□□□ 1
MBD1-217ENST00000588937 ADGRL1O94910 1474 aa21.31■■□□□ 1
MBD1-217ENST00000588937 CCDC7Q96M83 1385 aa21.29■■□□□ 1
MBD1-217ENST00000588937 MAGI2Q86UL8 1455 aa21.29■■□□□ 1
MBD1-217ENST00000588937 CNTLNQ9NXG0 1405 aa21.29■■□□□ 1
MBD1-217ENST00000588937 SCAPERQ9BY12 1400 aa21.28■■□□□ 1
MBD1-217ENST00000588937 RALGAPBQ86X10 1494 aa21.27■□□□□ 0.99
MBD1-217ENST00000588937 CCDC144AA2RUR9 1427 aa21.25■□□□□ 0.99
MBD1-217ENST00000588937 INO80Q9ULG1 1556 aaPredicted RBP21.25■□□□□ 0.99
MBD1-217ENST00000588937 SPAG9O60271 1321 aaKnown RBP21.25■□□□□ 0.99
MBD1-217ENST00000588937 ZFYVE16Q7Z3T8 1539 aa21.24■□□□□ 0.99
MBD1-217ENST00000588937 ZNF518AQ6AHZ1 1483 aa21.24■□□□□ 0.99
MBD1-217ENST00000588937 KDM5CP41229 1560 aa21.23■□□□□ 0.99
MBD1-217ENST00000588937 USP47Q96K76 1375 aa21.23■□□□□ 0.99
MBD1-217ENST00000588937 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.23■□□□□ 0.99
MBD1-217ENST00000588937 KIF13AQ9H1H9 1805 aa21.22■□□□□ 0.99
MBD1-217ENST00000588937 ZNF326Q5BKZ1 582 aaKnown RBP21.22■□□□□ 0.99
MBD1-217ENST00000588937 FAM69CQ0P6D2 419 aa21.2■□□□□ 0.99
MBD1-217ENST00000588937 AFAP1Q8N556 730 aa21.2■□□□□ 0.99
MBD1-217ENST00000588937 ATP10AO60312 1499 aa21.2■□□□□ 0.98
MBD1-217ENST00000588937 PPRC1Q5VV67 1664 aaKnown RBP21.2■□□□□ 0.98
MBD1-217ENST00000588937 POGZQ7Z3K3 1410 aa21.2■□□□□ 0.98
MBD1-217ENST00000588937 ATP7AQ04656 1500 aa21.2■□□□□ 0.98
MBD1-217ENST00000588937 ARID4BQ4LE39 1312 aaPredicted RBP21.2■□□□□ 0.98
MBD1-217ENST00000588937 C11orf95C9JLR9 678 aaPredicted RBP21.2■□□□□ 0.98
MBD1-217ENST00000588937 KIF7Q2M1P5 1343 aa21.19■□□□□ 0.98
MBD1-217ENST00000588937 MLH3Q9UHC1 1453 aa21.17■□□□□ 0.98
MBD1-217ENST00000588937 KIDINS220Q9ULH0 1771 aa21.17■□□□□ 0.98
MBD1-217ENST00000588937 DCAF11Q8TEB1 546 aa21.17■□□□□ 0.98
MBD1-217ENST00000588937 PLA2R1Q13018 1463 aa21.17■□□□□ 0.98
MBD1-217ENST00000588937 CARD11Q9BXL7 1154 aa21.15■□□□□ 0.98
MBD1-217ENST00000588937 RICTORQ6R327 1708 aa21.15■□□□□ 0.98
MBD1-217ENST00000588937 KDM2AQ9Y2K7 1162 aa21.14■□□□□ 0.97
MBD1-217ENST00000588937 DEPDC5O75140 1603 aa21.13■□□□□ 0.97
MBD1-217ENST00000588937 HECW2Q9P2P5 1572 aa21.12■□□□□ 0.97
MBD1-217ENST00000588937 BCORL1Q5H9F3 1711 aa21.11■□□□□ 0.97
MBD1-217ENST00000588937 PRAG1Q86YV5 1406 aa21.11■□□□□ 0.97
MBD1-217ENST00000588937 EIF2AK4Q9P2K8 1649 aaKnown RBP21.11■□□□□ 0.97
MBD1-217ENST00000588937 TRPM1Q7Z4N2 1603 aa21.11■□□□□ 0.97
MBD1-217ENST00000588937 ROCK2O75116 1388 aaKnown RBP21.1■□□□□ 0.97
MBD1-217ENST00000588937 TSPOAP1O95153 1857 aa21.09■□□□□ 0.97
MBD1-217ENST00000588937 KANK1Q14678 1352 aa21.09■□□□□ 0.97
MBD1-217ENST00000588937 PRKRIP1Q9H875 184 aaPredicted RBP21.08■□□□□ 0.97
MBD1-217ENST00000588937 DHX29Q7Z478 1369 aaKnown RBP21.08■□□□□ 0.97
MBD1-217ENST00000588937 A2MP01023 1474 aa21.07■□□□□ 0.96
MBD1-217ENST00000588937 E9PCH4 1651 aa21.07■□□□□ 0.96
MBD1-217ENST00000588937 ZMYM4Q5VZL5 1548 aa21.07■□□□□ 0.96
MBD1-217ENST00000588937 LAMC1P11047 1609 aa21.07■□□□□ 0.96
MBD1-217ENST00000588937 TET3O43151 1660 aa21.07■□□□□ 0.96
MBD1-217ENST00000588937 FRMPD1Q5SYB0 1578 aa21.06■□□□□ 0.96
MBD1-217ENST00000588937 RGL3Q3MIN7 710 aa21.05■□□□□ 0.96
MBD1-217ENST00000588937 MYT1LQ9UL68 1186 aa21.05■□□□□ 0.96
MBD1-217ENST00000588937 TRPM2O94759 1503 aa21.04■□□□□ 0.96
MBD1-217ENST00000588937 VWDEQ8N2E2 1590 aa21.04■□□□□ 0.96
MBD1-217ENST00000588937 SPHKAPQ2M3C7 1700 aa21.04■□□□□ 0.96
MBD1-217ENST00000588937 TRHP20396 242 aaPredicted RBP21.03■□□□□ 0.96
MBD1-217ENST00000588937 GPRASP1Q5JY77 1395 aa21.03■□□□□ 0.96
MBD1-217ENST00000588937 PTPRTO14522 1441 aa21.02■□□□□ 0.95
MBD1-217ENST00000588937 PRDM15P57071 1507 aaPredicted RBP21.01■□□□□ 0.95
MBD1-217ENST00000588937 ABCA6Q8N139 1617 aa21.01■□□□□ 0.95
MBD1-217ENST00000588937 CEP152O94986 1710 aa21.01■□□□□ 0.95
MBD1-217ENST00000588937 ST20-MTHFSA0A0A6YYL1 179 aa21■□□□□ 0.95
MBD1-217ENST00000588937 RAPGEF3O95398 923 aa21■□□□□ 0.95
MBD1-217ENST00000588937 STAC3Q96MF2 364 aa21■□□□□ 0.95
MBD1-217ENST00000588937 DIP2CQ9Y2E4 1556 aa20.99■□□□□ 0.95
MBD1-217ENST00000588937 KIF3BO15066 747 aa20.98■□□□□ 0.95
MBD1-217ENST00000588937 RNF17Q9BXT8 1623 aaKnown RBP20.98■□□□□ 0.95
MBD1-217ENST00000588937 POLR3GLQ9BT43 218 aa20.97■□□□□ 0.95
MBD1-217ENST00000588937 SUPT16HQ9Y5B9 1047 aaKnown RBP20.96■□□□□ 0.95
MBD1-217ENST00000588937 MROH1Q8NDA8 1641 aa20.96■□□□□ 0.95
MBD1-217ENST00000588937 NEURL4Q96JN8 1562 aa20.96■□□□□ 0.95
MBD1-217ENST00000588937 PELP1Q8IZL8 1130 aaKnown RBP20.95■□□□□ 0.94
MBD1-217ENST00000588937 REREQ9P2R6 1566 aa20.94■□□□□ 0.94
MBD1-217ENST00000588937 HNRNPUQ00839 825 aaKnown RBP eCLIP20.94■□□□□ 0.94
MBD1-217ENST00000588937 MRS2Q9HD23 443 aa20.94■□□□□ 0.94
MBD1-217ENST00000588937 CLTCL1P53675 1640 aa20.93■□□□□ 0.94
MBD1-217ENST00000588937 LMTK2Q8IWU2 1503 aa20.92■□□□□ 0.94
MBD1-217ENST00000588937 COL17A1Q9UMD9 1497 aaPredicted RBP20.91■□□□□ 0.94
MBD1-217ENST00000588937 NBPF1Q3BBV0 1214 aa20.91■□□□□ 0.94
MBD1-217ENST00000588937 MADDQ8WXG6 1647 aa20.9■□□□□ 0.94
MBD1-217ENST00000588937 EFCAB6Q5THR3 1501 aa20.9■□□□□ 0.94
MBD1-217ENST00000588937 KTN1Q86UP2 1357 aaKnown RBP20.89■□□□□ 0.94
MBD1-217ENST00000588937 YEATS2Q9ULM3 1422 aa20.89■□□□□ 0.94
MBD1-217ENST00000588937 CCDC184Q52MB2 194 aa20.87■□□□□ 0.93
MBD1-217ENST00000588937 NEFLP07196 543 aa20.87■□□□□ 0.93
MBD1-217ENST00000588937 AGLP35573 1532 aa20.85■□□□□ 0.93
MBD1-217ENST00000588937 KIF1BO60333 1816 aa20.85■□□□□ 0.93
MBD1-217ENST00000588937 KIAA1210Q9ULL0 1709 aa20.84■□□□□ 0.93
MBD1-217ENST00000588937 FAM9BQ8IZU0 186 aa20.84■□□□□ 0.93
MBD1-217ENST00000588937 ARHGEF40Q8TER5 1519 aa20.83■□□□□ 0.92
MBD1-217ENST00000588937 RALBP1Q15311 655 aa20.82■□□□□ 0.92
MBD1-217ENST00000588937 IQGAP1P46940 1657 aa20.82■□□□□ 0.92
MBD1-217ENST00000588937 TMF1P82094 1093 aa20.82■□□□□ 0.92
MBD1-217ENST00000588937 TESK2Q96S53 571 aa20.81■□□□□ 0.92
MBD1-217ENST00000588937 ZC3H13Q5T200 1668 aaKnown RBP20.8■□□□□ 0.92
MBD1-217ENST00000588937 MYOM2P54296 1465 aa20.79■□□□□ 0.92
MBD1-217ENST00000588937 ZBED9Q6R2W3 1325 aa20.79■□□□□ 0.92
MBD1-217ENST00000588937 FKBP8Q14318 412 aa20.78■□□□□ 0.92
MBD1-217ENST00000588937 SCAF11Q99590 1463 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms