RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 MYT1LQ9UL68 1186 aa16.58■□□□□ 0.24
SMAD4-205ENST00000588745 TIMELESSQ9UNS1 1208 aa16.58■□□□□ 0.24
SMAD4-205ENST00000588745 DIP2CQ9Y2E4 1556 aa16.57■□□□□ 0.24
SMAD4-205ENST00000588745 NEUROD1Q13562 356 aa16.57■□□□□ 0.24
SMAD4-205ENST00000588745 A2MP01023 1474 aa16.57■□□□□ 0.24
SMAD4-205ENST00000588745 PRDM15P57071 1507 aaPredicted RBP16.56■□□□□ 0.24
SMAD4-205ENST00000588745 BCORL1Q5H9F3 1711 aa16.56■□□□□ 0.24
SMAD4-205ENST00000588745 RAPGEF3O95398 923 aa16.55■□□□□ 0.24
SMAD4-205ENST00000588745 FOXD1Q16676 465 aa16.55■□□□□ 0.24
SMAD4-205ENST00000588745 MROH1Q8NDA8 1641 aa16.55■□□□□ 0.24
SMAD4-205ENST00000588745 RNF17Q9BXT8 1623 aaKnown RBP16.54■□□□□ 0.24
SMAD4-205ENST00000588745 TONSLQ96HA7 1378 aa16.54■□□□□ 0.24
SMAD4-205ENST00000588745 PKD2Q13563 968 aa16.54■□□□□ 0.24
SMAD4-205ENST00000588745 VWDEQ8N2E2 1590 aa16.54■□□□□ 0.24
SMAD4-205ENST00000588745 RPRD2Q5VT52 1461 aaKnown RBP16.54■□□□□ 0.24
SMAD4-205ENST00000588745 DNAJC5Q9H3Z4 198 aa16.52■□□□□ 0.24
SMAD4-205ENST00000588745 TET3O43151 1660 aa16.51■□□□□ 0.23
SMAD4-205ENST00000588745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.233e-6■■□□□ 11.7
SMAD4-205ENST00000588745 YEATS2Q9ULM3 1422 aa16.49■□□□□ 0.23
SMAD4-205ENST00000588745 KANK1Q14678 1352 aa16.48■□□□□ 0.23
SMAD4-205ENST00000588745 KIF3BO15066 747 aa16.48■□□□□ 0.23
SMAD4-205ENST00000588745 E9PCH4 1651 aa16.47■□□□□ 0.23
SMAD4-205ENST00000588745 REREQ9P2R6 1566 aa16.47■□□□□ 0.23
SMAD4-205ENST00000588745 LMTK2Q8IWU2 1503 aa16.46■□□□□ 0.23
SMAD4-205ENST00000588745 ATP10AO60312 1499 aa16.46■□□□□ 0.22
SMAD4-205ENST00000588745 COL17A1Q9UMD9 1497 aaPredicted RBP16.46■□□□□ 0.22
SMAD4-205ENST00000588745 ARHGEF40Q8TER5 1519 aa16.45■□□□□ 0.22
SMAD4-205ENST00000588745 CEP152O94986 1710 aa16.45■□□□□ 0.22
SMAD4-205ENST00000588745 EFCAB6Q5THR3 1501 aa16.44■□□□□ 0.22
SMAD4-205ENST00000588745 PPP1R15AO75807 674 aaPredicted RBP16.43■□□□□ 0.22
SMAD4-205ENST00000588745 SPHKAPQ2M3C7 1700 aa16.43■□□□□ 0.22
SMAD4-205ENST00000588745 PLA2R1Q13018 1463 aa16.42■□□□□ 0.22
SMAD4-205ENST00000588745 TRPM2O94759 1503 aa16.41■□□□□ 0.22
SMAD4-205ENST00000588745 CCDC144AA2RUR9 1427 aa16.41■□□□□ 0.22
SMAD4-205ENST00000588745 ZC3H13Q5T200 1668 aaKnown RBP16.41■□□□□ 0.22
SMAD4-205ENST00000588745 ABCC3O15438 1527 aa16.4■□□□□ 0.22
SMAD4-205ENST00000588745 AGLP35573 1532 aa16.4■□□□□ 0.22
SMAD4-205ENST00000588745 PTPRTO14522 1441 aa16.38■□□□□ 0.21
SMAD4-205ENST00000588745 CAMSAP1Q5T5Y3 1602 aa16.38■□□□□ 0.21
SMAD4-205ENST00000588745 ZNF316A6NFI3 1004 aaPredicted RBP16.38■□□□□ 0.21
SMAD4-205ENST00000588745 L3MBTL2Q969R5 705 aa16.38■□□□□ 0.21
SMAD4-205ENST00000588745 SIGLEC1Q9BZZ2 1709 aa16.36■□□□□ 0.21
SMAD4-205ENST00000588745 TRHP20396 242 aaPredicted RBP16.35■□□□□ 0.21
SMAD4-205ENST00000588745 GGT6Q6P531 493 aa16.35■□□□□ 0.21
SMAD4-205ENST00000588745 CLTCL1P53675 1640 aa16.34■□□□□ 0.21
SMAD4-205ENST00000588745 NPATQ14207 1427 aa16.32■□□□□ 0.2
SMAD4-205ENST00000588745 WASHC2CQ9Y4E1 1318 aa16.3■□□□□ 0.2
SMAD4-205ENST00000588745 NEURL4Q96JN8 1562 aa16.3■□□□□ 0.2
SMAD4-205ENST00000588745 ARHGAP31Q2M1Z3 1444 aa16.29■□□□□ 0.2
SMAD4-205ENST00000588745 UHRF1BP1Q6BDS2 1440 aa16.29■□□□□ 0.2
SMAD4-205ENST00000588745 SPATA31E1Q6ZUB1 1445 aa16.29■□□□□ 0.2
SMAD4-205ENST00000588745 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
SMAD4-205ENST00000588745 UGGT1Q9NYU2 1555 aa16.27■□□□□ 0.19
SMAD4-205ENST00000588745 NBPF8Q3BBV2 869 aa16.26■□□□□ 0.19
SMAD4-205ENST00000588745 KIF1BO60333 1816 aa16.25■□□□□ 0.19
SMAD4-205ENST00000588745 NOS1P29475 1434 aa16.25■□□□□ 0.19
SMAD4-205ENST00000588745 CLTCQ00610 1675 aaKnown RBP16.25■□□□□ 0.19
SMAD4-205ENST00000588745 RALGAPBQ86X10 1494 aa16.25■□□□□ 0.19
SMAD4-205ENST00000588745 PREX1Q8TCU6 1659 aa16.24■□□□□ 0.19
SMAD4-205ENST00000588745 SYNMO15061 1565 aa16.24■□□□□ 0.19
SMAD4-205ENST00000588745 PPP6R1Q9UPN7 881 aa16.24■□□□□ 0.19
SMAD4-205ENST00000588745 MROH2AA6NES4 1674 aa16.23■□□□□ 0.19
SMAD4-205ENST00000588745 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
SMAD4-205ENST00000588745 ADGRB3O60242 1522 aa16.23■□□□□ 0.19
SMAD4-205ENST00000588745 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
SMAD4-205ENST00000588745 TRPM1Q7Z4N2 1603 aa16.21■□□□□ 0.19
SMAD4-205ENST00000588745 DCAF11Q8TEB1 546 aa16.21■□□□□ 0.19
SMAD4-205ENST00000588745 CFAP65Q6ZU64 1925 aaKnown RBP16.2■□□□□ 0.18
SMAD4-205ENST00000588745 RGL3Q3MIN7 710 aa16.2■□□□□ 0.18
SMAD4-205ENST00000588745 IFT172Q9UG01 1749 aa16.2■□□□□ 0.18
SMAD4-205ENST00000588745 ZNF326Q5BKZ1 582 aaKnown RBP16.19■□□□□ 0.18
SMAD4-205ENST00000588745 MADDQ8WXG6 1647 aa16.19■□□□□ 0.18
SMAD4-205ENST00000588745 ERVK-7P63135 1459 aa16.18■□□□□ 0.18
SMAD4-205ENST00000588745 KDM2AQ9Y2K7 1162 aa16.17■□□□□ 0.18
SMAD4-205ENST00000588745 MLECQ14165 292 aa16.16■□□□□ 0.18
SMAD4-205ENST00000588745 DIEXFQ68CQ4 756 aaKnown RBP16.16■□□□□ 0.18
SMAD4-205ENST00000588745 SPATA31D1Q6ZQQ2 1576 aa16.16■□□□□ 0.18
SMAD4-205ENST00000588745 MYOM2P54296 1465 aa16.16■□□□□ 0.18
SMAD4-205ENST00000588745 LAMC1P11047 1609 aa16.16■□□□□ 0.18
SMAD4-205ENST00000588745 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
SMAD4-205ENST00000588745 ARID4BQ4LE39 1312 aaPredicted RBP16.14■□□□□ 0.17
SMAD4-205ENST00000588745 HSPA5P11021 654 aaKnown RBP16.13■□□□□ 0.17
SMAD4-205ENST00000588745 STAC3Q96MF2 364 aa16.13■□□□□ 0.17
SMAD4-205ENST00000588745 PPLO60437 1756 aa16.13■□□□□ 0.17
SMAD4-205ENST00000588745 GPRASP1Q5JY77 1395 aa16.12■□□□□ 0.17
SMAD4-205ENST00000588745 HIRIP3Q9BW71 556 aaPredicted RBP16.12■□□□□ 0.17
SMAD4-205ENST00000588745 ROCK2O75116 1388 aaKnown RBP16.11■□□□□ 0.17
SMAD4-205ENST00000588745 USP47Q96K76 1375 aa16.11■□□□□ 0.17
SMAD4-205ENST00000588745 KIAA1210Q9ULL0 1709 aa16.11■□□□□ 0.17
SMAD4-205ENST00000588745 SLC52A1Q9NWF4 448 aa16.11■□□□□ 0.17
SMAD4-205ENST00000588745 NRXN1Q9ULB1 1477 aa16.1■□□□□ 0.17
SMAD4-205ENST00000588745 TMEM131LA2VDJ0 1609 aa16.1■□□□□ 0.17
SMAD4-205ENST00000588745 FER1L4A9Z1Z3 1794 aa16.1■□□□□ 0.17
SMAD4-205ENST00000588745 ESF1Q9H501 851 aaKnown RBP16.1■□□□□ 0.17
SMAD4-205ENST00000588745 POLR1AO95602 1720 aaPredicted RBP16.09■□□□□ 0.17
SMAD4-205ENST00000588745 CHGAP10645 457 aaKnown RBP16.08■□□□□ 0.16
SMAD4-205ENST00000588745 ZMYM3Q14202 1370 aa16.08■□□□□ 0.16
SMAD4-205ENST00000588745 NEXMIFQ5QGS0 1516 aa16.08■□□□□ 0.16
SMAD4-205ENST00000588745 FBXO31Q5XUX0 539 aaPredicted RBP16.08■□□□□ 0.16
SMAD4-205ENST00000588745 CARD11Q9BXL7 1154 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms