RNA–Protein interactions for RNA: ENST00000588642.1

NLE1-205, Transcript of notchless homolog 1, humanhuman

TSL 2

Gene NLE1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-205ENST00000588642 GGT6Q6P531 493 aa20.6■□□□□ 0.89
NLE1-205ENST00000588642 KANK1Q14678 1352 aa20.59■□□□□ 0.89
NLE1-205ENST00000588642 PZPP20742 1482 aa20.56■□□□□ 0.88
NLE1-205ENST00000588642 PKD2Q13563 968 aa20.56■□□□□ 0.88
NLE1-205ENST00000588642 ARHGEF40Q8TER5 1519 aa20.56■□□□□ 0.88
NLE1-205ENST00000588642 ARID4BQ4LE39 1312 aaPredicted RBP20.55■□□□□ 0.88
NLE1-205ENST00000588642 CLSPNQ9HAW4 1339 aa20.55■□□□□ 0.88
NLE1-205ENST00000588642 EIF2AK4Q9P2K8 1649 aaKnown RBP20.55■□□□□ 0.88
NLE1-205ENST00000588642 FOXD1Q16676 465 aa20.53■□□□□ 0.88
NLE1-205ENST00000588642 UNC13BO14795 1591 aa20.53■□□□□ 0.88
NLE1-205ENST00000588642 KDM5DQ9BY66 1539 aa20.53■□□□□ 0.88
NLE1-205ENST00000588642 REREQ9P2R6 1566 aa20.51■□□□□ 0.87
NLE1-205ENST00000588642 MLECQ14165 292 aa20.51■□□□□ 0.87
NLE1-205ENST00000588642 WASHC2CQ9Y4E1 1318 aa20.51■□□□□ 0.87
NLE1-205ENST00000588642 AGLP35573 1532 aa20.5■□□□□ 0.87
NLE1-205ENST00000588642 FAM135AQ9P2D6 1515 aa20.5■□□□□ 0.87
NLE1-205ENST00000588642 ZEB1P37275 1124 aaPredicted RBP20.48■□□□□ 0.87
NLE1-205ENST00000588642 PPP6R1Q9UPN7 881 aa20.47■□□□□ 0.87
NLE1-205ENST00000588642 DEPDC5O75140 1603 aa20.46■□□□□ 0.87
NLE1-205ENST00000588642 RNF17Q9BXT8 1623 aaKnown RBP20.46■□□□□ 0.87
NLE1-205ENST00000588642 NEUROD1Q13562 356 aa20.46■□□□□ 0.87
NLE1-205ENST00000588642 SIN3AQ96ST3 1273 aa20.46■□□□□ 0.87
NLE1-205ENST00000588642 IQGAP3Q86VI3 1631 aa20.45■□□□□ 0.87
NLE1-205ENST00000588642 PRDM15P57071 1507 aaPredicted RBP20.45■□□□□ 0.86
NLE1-205ENST00000588642 BCORL1Q5H9F3 1711 aa20.44■□□□□ 0.86
NLE1-205ENST00000588642 ESF1Q9H501 851 aaKnown RBP20.44■□□□□ 0.86
NLE1-205ENST00000588642 MROH1Q8NDA8 1641 aa20.44■□□□□ 0.86
NLE1-205ENST00000588642 VWDEQ8N2E2 1590 aa20.43■□□□□ 0.86
NLE1-205ENST00000588642 ANKRD30BQ9BXX2 1392 aa20.43■□□□□ 0.86
NLE1-205ENST00000588642 LMTK2Q8IWU2 1503 aa20.39■□□□□ 0.85
NLE1-205ENST00000588642 ABCC3O15438 1527 aa20.38■□□□□ 0.85
NLE1-205ENST00000588642 SIGLEC1Q9BZZ2 1709 aa20.38■□□□□ 0.85
NLE1-205ENST00000588642 TET3O43151 1660 aa20.35■□□□□ 0.85
NLE1-205ENST00000588642 EFCAB6Q5THR3 1501 aa20.32■□□□□ 0.84
NLE1-205ENST00000588642 PLA2R1Q13018 1463 aa20.31■□□□□ 0.84
NLE1-205ENST00000588642 NPATQ14207 1427 aa20.31■□□□□ 0.84
NLE1-205ENST00000588642 CEP152O94986 1710 aa20.3■□□□□ 0.84
NLE1-205ENST00000588642 ARHGAP31Q2M1Z3 1444 aa20.3■□□□□ 0.84
NLE1-205ENST00000588642 TIMELESSQ9UNS1 1208 aa20.3■□□□□ 0.84
NLE1-205ENST00000588642 RPRD2Q5VT52 1461 aaKnown RBP20.3■□□□□ 0.84
NLE1-205ENST00000588642 CCDC144AA2RUR9 1427 aa20.29■□□□□ 0.84
NLE1-205ENST00000588642 PTPRTO14522 1441 aa20.29■□□□□ 0.84
NLE1-205ENST00000588642 TONSLQ96HA7 1378 aa20.29■□□□□ 0.84
NLE1-205ENST00000588642 E9PCH4 1651 aa20.29■□□□□ 0.84
NLE1-205ENST00000588642 CNTLNQ9NXG0 1405 aa20.28■□□□□ 0.84
NLE1-205ENST00000588642 ZMYM3Q14202 1370 aa20.28■□□□□ 0.84
NLE1-205ENST00000588642 ZC3H13Q5T200 1668 aaKnown RBP20.28■□□□□ 0.84
NLE1-205ENST00000588642 FBXO31Q5XUX0 539 aaPredicted RBP20.27■□□□□ 0.84
NLE1-205ENST00000588642 CAMSAP1Q5T5Y3 1602 aa20.26■□□□□ 0.83
NLE1-205ENST00000588642 CLTCQ00610 1675 aaKnown RBP20.23■□□□□ 0.83
NLE1-205ENST00000588642 NOS1P29475 1434 aa20.22■□□□□ 0.83
NLE1-205ENST00000588642 L3MBTL2Q969R5 705 aa20.22■□□□□ 0.83
NLE1-205ENST00000588642 TRPM2O94759 1503 aa20.22■□□□□ 0.83
NLE1-205ENST00000588642 RGL3Q3MIN7 710 aa20.21■□□□□ 0.83
NLE1-205ENST00000588642 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
NLE1-205ENST00000588642 CHGAP10645 457 aaKnown RBP20.2■□□□□ 0.82
NLE1-205ENST00000588642 CEBPAP49715 358 aaPredicted RBP20.2■□□□□ 0.82
NLE1-205ENST00000588642 SLC52A1Q9NWF4 448 aa20.2■□□□□ 0.82
NLE1-205ENST00000588642 ERVK-7P63135 1459 aa20.18■□□□□ 0.82
NLE1-205ENST00000588642 PPP1R15AO75807 674 aaPredicted RBP20.18■□□□□ 0.82
NLE1-205ENST00000588642 SPHKAPQ2M3C7 1700 aa20.17■□□□□ 0.82
NLE1-205ENST00000588642 IDI1Q13907 227 aa20.17■□□□□ 0.82
NLE1-205ENST00000588642 UGGT1Q9NYU2 1555 aa20.14■□□□□ 0.81
NLE1-205ENST00000588642 DCAF11Q8TEB1 546 aa20.14■□□□□ 0.81
NLE1-205ENST00000588642 KDM2AQ9Y2K7 1162 aa20.14■□□□□ 0.81
NLE1-205ENST00000588642 CLTCL1P53675 1640 aa20.13■□□□□ 0.81
NLE1-205ENST00000588642 TNRQ92752 1358 aa20.13■□□□□ 0.81
NLE1-205ENST00000588642 ZNF326Q5BKZ1 582 aaKnown RBP20.13■□□□□ 0.81
NLE1-205ENST00000588642 STAG3Q9UJ98 1225 aa20.12■□□□□ 0.81
NLE1-205ENST00000588642 SYNMO15061 1565 aa20.12■□□□□ 0.81
NLE1-205ENST00000588642 SPATA31E1Q6ZUB1 1445 aa20.11■□□□□ 0.81
NLE1-205ENST00000588642 FER1L4A9Z1Z3 1794 aa20.11■□□□□ 0.81
NLE1-205ENST00000588642 MROH2AA6NES4 1674 aa20.11■□□□□ 0.81
NLE1-205ENST00000588642 PREX1Q8TCU6 1659 aa20.11■□□□□ 0.81
NLE1-205ENST00000588642 MADDQ8WXG6 1647 aa20.11■□□□□ 0.81
NLE1-205ENST00000588642 SPATA31D1Q6ZQQ2 1576 aa20.11■□□□□ 0.81
NLE1-205ENST00000588642 CFAP65Q6ZU64 1925 aaKnown RBP20.11■□□□□ 0.81
NLE1-205ENST00000588642 ADAMTSL3P82987 1691 aa20.1■□□□□ 0.81
NLE1-205ENST00000588642 RIMS1Q86UR5 1692 aaKnown RBP20.06■□□□□ 0.8
NLE1-205ENST00000588642 STAC3Q96MF2 364 aa20.05■□□□□ 0.8
NLE1-205ENST00000588642 RPGRIP1LQ68CZ1 1315 aa20.04■□□□□ 0.8
NLE1-205ENST00000588642 NBPF8Q3BBV2 869 aa20.04■□□□□ 0.8
NLE1-205ENST00000588642 PIK3C2BO00750 1634 aa20.04■□□□□ 0.8
NLE1-205ENST00000588642 C3P01024 1663 aa20.03■□□□□ 0.8
NLE1-205ENST00000588642 NEURL4Q96JN8 1562 aa20.01■□□□□ 0.79
NLE1-205ENST00000588642 PTPRMP28827 1452 aa20.01■□□□□ 0.79
NLE1-205ENST00000588642 ADGRB3O60242 1522 aa20.01■□□□□ 0.79
NLE1-205ENST00000588642 NLRP1Q9C000 1473 aa20■□□□□ 0.79
NLE1-205ENST00000588642 KDM4FA0A1W2PPD8 638 aa20■□□□□ 0.79
NLE1-205ENST00000588642 KIF1BO60333 1816 aa19.99■□□□□ 0.79
NLE1-205ENST00000588642 VGFO15240 615 aaPredicted RBP19.98■□□□□ 0.79
NLE1-205ENST00000588642 UHRF1BP1Q6BDS2 1440 aa19.98■□□□□ 0.79
NLE1-205ENST00000588642 NUTM2DQ5VT03 806 aaPredicted RBP19.97■□□□□ 0.79
NLE1-205ENST00000588642 A2ML1A8K2U0 1454 aa19.97■□□□□ 0.79
NLE1-205ENST00000588642 ADGRF5Q8IZF2 1346 aa19.96■□□□□ 0.79
NLE1-205ENST00000588642 TMEM131LA2VDJ0 1609 aa19.95■□□□□ 0.78
NLE1-205ENST00000588642 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
NLE1-205ENST00000588642 THEMISQ8N1K5 641 aaPredicted RBP19.95■□□□□ 0.78
NLE1-205ENST00000588642 PRAG1Q86YV5 1406 aa19.94■□□□□ 0.78
NLE1-205ENST00000588642 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms