RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 TRAPPC8Q9Y2L5 1435 aa21.63■■□□□ 1.05
PPP6R1-204ENST00000587457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.62■■□□□ 1.05
PPP6R1-204ENST00000587457 ABCC1P33527 1531 aa21.61■■□□□ 1.05
PPP6R1-204ENST00000587457 IL27Q8NEV9 243 aa21.6■■□□□ 1.05
PPP6R1-204ENST00000587457 FAM135AQ9P2D6 1515 aa21.6■■□□□ 1.05
PPP6R1-204ENST00000587457 IPO9Q96P70 1041 aaKnown RBP21.59■■□□□ 1.05
PPP6R1-204ENST00000587457 CCDC184Q52MB2 194 aa21.59■■□□□ 1.05
PPP6R1-204ENST00000587457 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
PPP6R1-204ENST00000587457 WASHC2AQ641Q2 1341 aa21.58■■□□□ 1.05
PPP6R1-204ENST00000587457 PLXNC1O60486 1568 aa21.58■■□□□ 1.04
PPP6R1-204ENST00000587457 ASXL2Q76L83 1435 aa21.58■■□□□ 1.04
PPP6R1-204ENST00000587457 AFAP1Q8N556 730 aa21.58■■□□□ 1.04
PPP6R1-204ENST00000587457 ANP32AP39687 249 aaKnown RBP21.56■■□□□ 1.04
PPP6R1-204ENST00000587457 CCDC136Q96JN2 1154 aa21.56■■□□□ 1.04
PPP6R1-204ENST00000587457 ZBTB47Q9UFB7 747 aaPredicted RBP21.55■■□□□ 1.04
PPP6R1-204ENST00000587457 DUOX2Q9NRD8 1548 aa21.54■■□□□ 1.04
PPP6R1-204ENST00000587457 SPAG9O60271 1321 aaKnown RBP21.54■■□□□ 1.04
PPP6R1-204ENST00000587457 RTN4Q9NQC3 1192 aaKnown RBP21.54■■□□□ 1.04
PPP6R1-204ENST00000587457 ARAP3Q8WWN8 1544 aa21.54■■□□□ 1.04
PPP6R1-204ENST00000587457 FAM9BQ8IZU0 186 aa21.53■■□□□ 1.04
PPP6R1-204ENST00000587457 FANCAO15360 1455 aa21.52■■□□□ 1.04
PPP6R1-204ENST00000587457 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.04
PPP6R1-204ENST00000587457 UNC13BO14795 1591 aa21.52■■□□□ 1.04
PPP6R1-204ENST00000587457 NPM1P06748 294 aaKnown RBP eCLIP21.52■■□□□ 1.04
PPP6R1-204ENST00000587457 ERBINQ96RT1 1412 aa21.51■■□□□ 1.03
PPP6R1-204ENST00000587457 ZBED9Q6R2W3 1325 aa21.5■■□□□ 1.03
PPP6R1-204ENST00000587457 ABCA9Q8IUA7 1624 aa21.49■■□□□ 1.03
PPP6R1-204ENST00000587457 KDM2AQ9Y2K7 1162 aa21.49■■□□□ 1.03
PPP6R1-204ENST00000587457 SPATA31E1Q6ZUB1 1445 aa21.49■■□□□ 1.03
PPP6R1-204ENST00000587457 DCAF11Q8TEB1 546 aa21.46■■□□□ 1.03
PPP6R1-204ENST00000587457 RTEL1-TNFRSF6BF6WH68 1400 aa21.46■■□□□ 1.03
PPP6R1-204ENST00000587457 CCDC144AA2RUR9 1427 aa21.46■■□□□ 1.03
PPP6R1-204ENST00000587457 ZFYVE16Q7Z3T8 1539 aa21.45■■□□□ 1.03
PPP6R1-204ENST00000587457 PLA2R1Q13018 1463 aa21.45■■□□□ 1.02
PPP6R1-204ENST00000587457 SCAPERQ9BY12 1400 aa21.45■■□□□ 1.02
PPP6R1-204ENST00000587457 CCDC7Q96M83 1385 aa21.45■■□□□ 1.02
PPP6R1-204ENST00000587457 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.45■■□□□ 1.02
PPP6R1-204ENST00000587457 ADGRL1O94910 1474 aa21.44■■□□□ 1.02
PPP6R1-204ENST00000587457 UHRF1BP1Q6BDS2 1440 aa21.44■■□□□ 1.02
PPP6R1-204ENST00000587457 IQGAP3Q86VI3 1631 aa21.44■■□□□ 1.02
PPP6R1-204ENST00000587457 MRS2Q9HD23 443 aa21.44■■□□□ 1.02
PPP6R1-204ENST00000587457 MAGI2Q86UL8 1455 aa21.43■■□□□ 1.02
PPP6R1-204ENST00000587457 USP47Q96K76 1375 aa21.42■■□□□ 1.02
PPP6R1-204ENST00000587457 RGL3Q3MIN7 710 aa21.41■■□□□ 1.02
PPP6R1-204ENST00000587457 PRKRIP1Q9H875 184 aaPredicted RBP21.41■■□□□ 1.02
PPP6R1-204ENST00000587457 KIF7Q2M1P5 1343 aa21.4■■□□□ 1.02
PPP6R1-204ENST00000587457 RALGAPBQ86X10 1494 aa21.39■■□□□ 1.01
PPP6R1-204ENST00000587457 CNTLNQ9NXG0 1405 aa21.38■■□□□ 1.01
PPP6R1-204ENST00000587457 CARD11Q9BXL7 1154 aa21.38■■□□□ 1.01
PPP6R1-204ENST00000587457 ATP7AQ04656 1500 aa21.38■■□□□ 1.01
PPP6R1-204ENST00000587457 INO80Q9ULG1 1556 aaPredicted RBP21.35■■□□□ 1.01
PPP6R1-204ENST00000587457 CD109Q6YHK3 1445 aa21.35■■□□□ 1.01
PPP6R1-204ENST00000587457 KIF3BO15066 747 aa21.33■■□□□ 1.01
PPP6R1-204ENST00000587457 KDM5CP41229 1560 aa21.33■■□□□ 1
PPP6R1-204ENST00000587457 NEFMP07197 916 aa21.32■■□□□ 1
PPP6R1-204ENST00000587457 UBE2Q2Q8WVN8 375 aa21.32■■□□□ 1
PPP6R1-204ENST00000587457 POLR3GLQ9BT43 218 aa21.32■■□□□ 1
PPP6R1-204ENST00000587457 ATP10AO60312 1499 aa21.31■■□□□ 1
PPP6R1-204ENST00000587457 A2MP01023 1474 aa21.31■■□□□ 1
PPP6R1-204ENST00000587457 ROCK2O75116 1388 aaKnown RBP21.31■■□□□ 1
PPP6R1-204ENST00000587457 SMG6Q86US8 1419 aaKnown RBP21.3■■□□□ 1
PPP6R1-204ENST00000587457 PRAG1Q86YV5 1406 aa21.3■■□□□ 1
PPP6R1-204ENST00000587457 LAS1LQ9Y4W2 734 aaKnown RBP21.3■■□□□ 1
PPP6R1-204ENST00000587457 DHX29Q7Z478 1369 aaKnown RBP21.3■■□□□ 1
PPP6R1-204ENST00000587457 NPM2Q86SE8 214 aaKnown RBP21.3■■□□□ 1
PPP6R1-204ENST00000587457 USP35Q9P2H5 1018 aa21.29■■□□□ 1
PPP6R1-204ENST00000587457 RNF123Q5XPI4 1314 aa21.28■■□□□ 1
PPP6R1-204ENST00000587457 POLR1AO95602 1720 aaPredicted RBP21.28■■□□□ 1
PPP6R1-204ENST00000587457 BCORL1Q5H9F3 1711 aa21.28■■□□□ 1
PPP6R1-204ENST00000587457 NUDCQ9Y266 331 aa21.28■■□□□ 1
PPP6R1-204ENST00000587457 ZNF518AQ6AHZ1 1483 aa21.27■■□□□ 1
PPP6R1-204ENST00000587457 ST20-MTHFSA0A0A6YYL1 179 aa21.27■■□□□ 1
PPP6R1-204ENST00000587457 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
PPP6R1-204ENST00000587457 WASHC2CQ9Y4E1 1318 aa21.26■□□□□ 0.99
PPP6R1-204ENST00000587457 KANK1Q14678 1352 aa21.26■□□□□ 0.99
PPP6R1-204ENST00000587457 NBPF1Q3BBV0 1214 aa21.25■□□□□ 0.99
PPP6R1-204ENST00000587457 DEPDC5O75140 1603 aa21.25■□□□□ 0.99
PPP6R1-204ENST00000587457 E9PCH4 1651 aa21.24■□□□□ 0.99
PPP6R1-204ENST00000587457 POGZQ7Z3K3 1410 aa21.23■□□□□ 0.99
PPP6R1-204ENST00000587457 KIDINS220Q9ULH0 1771 aa21.22■□□□□ 0.99
PPP6R1-204ENST00000587457 VWDEQ8N2E2 1590 aa21.2■□□□□ 0.98
PPP6R1-204ENST00000587457 PTPRTO14522 1441 aa21.2■□□□□ 0.98
PPP6R1-204ENST00000587457 TRPM1Q7Z4N2 1603 aa21.2■□□□□ 0.98
PPP6R1-204ENST00000587457 TRPM2O94759 1503 aa21.19■□□□□ 0.98
PPP6R1-204ENST00000587457 CFAP74Q9C0B2 1584 aa21.19■□□□□ 0.98
PPP6R1-204ENST00000587457 ARID4BQ4LE39 1312 aaPredicted RBP21.19■□□□□ 0.98
PPP6R1-204ENST00000587457 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
PPP6R1-204ENST00000587457 RAPGEF3O95398 923 aa21.18■□□□□ 0.98
PPP6R1-204ENST00000587457 MROH1Q8NDA8 1641 aa21.18■□□□□ 0.98
PPP6R1-204ENST00000587457 EIF2AK4Q9P2K8 1649 aaKnown RBP21.18■□□□□ 0.98
PPP6R1-204ENST00000587457 CNGB1Q14028 1251 aaPredicted RBP21.18■□□□□ 0.98
PPP6R1-204ENST00000587457 TET3O43151 1660 aa21.18■□□□□ 0.98
PPP6R1-204ENST00000587457 PPM1GO15355 546 aaPredicted RBP21.17■□□□□ 0.98
PPP6R1-204ENST00000587457 BRPF3Q9ULD4 1205 aa21.17■□□□□ 0.98
PPP6R1-204ENST00000587457 GPRASP1Q5JY77 1395 aa21.17■□□□□ 0.98
PPP6R1-204ENST00000587457 MLH3Q9UHC1 1453 aa21.15■□□□□ 0.98
PPP6R1-204ENST00000587457 PDE4AP27815 886 aa21.15■□□□□ 0.98
PPP6R1-204ENST00000587457 CLTCL1P53675 1640 aa21.14■□□□□ 0.97
PPP6R1-204ENST00000587457 SENP3-EIF4A1A0A087X0R7 540 aa21.14■□□□□ 0.97
PPP6R1-204ENST00000587457 TCERG1O14776 1098 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 8287.3 ms